RNA–Protein interactions for RNA: ENST00000508624.5

APC-208, Transcript of APC, WNT signaling pathway regulator, humanhuman

TSL 1 (best)

Gene APC, Length 7,406 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APC-208ENST00000508624 LETM1O95202 739 aaPredicted RBP6.46□□□□□ -1.37
APC-208ENST00000508624 TOPBP1Q92547 1522 aa6.46□□□□□ -1.37
APC-208ENST00000508624 ZNF428Q96B54 188 aa6.46□□□□□ -1.38
APC-208ENST00000508624 PTPRGP23470 1445 aa6.46□□□□□ -1.38
APC-208ENST00000508624 SYNJ2O15056 1496 aa6.46□□□□□ -1.38
APC-208ENST00000508624 CCDC141Q6ZP82 1450 aa6.46□□□□□ -1.38
APC-208ENST00000508624 CCDC173Q0VFZ6 552 aa6.46□□□□□ -1.38
APC-208ENST00000508624 DHX8Q14562 1220 aaKnown RBP6.46□□□□□ -1.38
APC-208ENST00000508624 INTS3Q68E01 1043 aaKnown RBP6.46□□□□□ -1.38
APC-208ENST00000508624 RPRD2Q5VT52 1461 aaKnown RBP6.46□□□□□ -1.38
APC-208ENST00000508624 RAD54L2Q9Y4B4 1467 aa6.46□□□□□ -1.38
APC-208ENST00000508624 PDIA4P13667 645 aaKnown RBP6.45□□□□□ -1.38
APC-208ENST00000508624 CCDC146Q8IYE0 955 aa6.45□□□□□ -1.38
APC-208ENST00000508624 CCDC39Q9UFE4 941 aa6.45□□□□□ -1.38
APC-208ENST00000508624 POLA1P09884 1462 aaPredicted RBP6.45□□□□□ -1.38
APC-208ENST00000508624 CTTNBP2Q8WZ74 1663 aa6.45□□□□□ -1.38
APC-208ENST00000508624 APAF1O14727 1248 aa6.45□□□□□ -1.38
APC-208ENST00000508624 HMGN5P82970 282 aaKnown RBP6.45□□□□□ -1.38
APC-208ENST00000508624 C9orf84Q5VXU9 1444 aa6.45□□□□□ -1.38
APC-208ENST00000508624 RUFY2Q8WXA3 655 aa6.45□□□□□ -1.38
APC-208ENST00000508624 IQGAP2Q13576 1575 aa6.45□□□□□ -1.38
APC-208ENST00000508624 DIAPH3Q9NSV4 1193 aa6.45□□□□□ -1.38
APC-208ENST00000508624 ITSN2Q9NZM3 1697 aa6.45□□□□□ -1.38
APC-208ENST00000508624 COG6Q9Y2V7 657 aa6.45□□□□□ -1.38
APC-208ENST00000508624 DHX29Q7Z478 1369 aaKnown RBP6.45□□□□□ -1.38
APC-208ENST00000508624 EPRSP07814 1512 aaKnown RBP6.44□□□□□ -1.38
APC-208ENST00000508624 WDR63Q8IWG1 891 aa6.44□□□□□ -1.38
APC-208ENST00000508624 UNC13AQ9UPW8 1703 aa6.44□□□□□ -1.38
APC-208ENST00000508624 RRP9O43818 475 aaKnown RBP6.44□□□□□ -1.38
APC-208ENST00000508624 PLIN1O60240 522 aa6.44□□□□□ -1.38
APC-208ENST00000508624 CWC22Q9HCG8 908 aaKnown RBP6.44□□□□□ -1.38
APC-208ENST00000508624 KIF3BO15066 747 aa6.44□□□□□ -1.38
APC-208ENST00000508624 ANKRD30BQ9BXX2 1392 aa6.44□□□□□ -1.38
APC-208ENST00000508624 MAPKBP1O60336 1514 aa6.44□□□□□ -1.38
APC-208ENST00000508624 ERBINQ96RT1 1412 aa6.44□□□□□ -1.38
APC-208ENST00000508624 LAMC3Q9Y6N6 1575 aa6.43□□□□□ -1.38
APC-208ENST00000508624 ANKRD45Q5TZF3 282 aa6.43□□□□□ -1.38
APC-208ENST00000508624 GCC1Q96CN9 775 aa6.43□□□□□ -1.38
APC-208ENST00000508624 TRAK2O60296 914 aa6.43□□□□□ -1.38
APC-208ENST00000508624 CDC45O75419 566 aa6.43□□□□□ -1.38
APC-208ENST00000508624 GNAI1P63096 354 aa6.43□□□□□ -1.38
APC-208ENST00000508624 RABEP1Q15276 862 aa6.43□□□□□ -1.38
APC-208ENST00000508624 GOLGA6L1Q8N7Z2 621 aa6.43□□□□□ -1.38
APC-208ENST00000508624 NASPP49321 788 aaPredicted RBP6.43□□□□□ -1.38
APC-208ENST00000508624 GPS2Q13227 327 aa6.43□□□□□ -1.38
APC-208ENST00000508624 LRRFIP1Q32MZ4 808 aaKnown RBP6.43□□□□□ -1.38
APC-208ENST00000508624 IFT140Q96RY7 1462 aa6.43□□□□□ -1.38
APC-208ENST00000508624 TRIM6-TRIM34B2RNG4 842 aa6.42□□□□□ -1.38
APC-208ENST00000508624 GOLGA6L19H0YKK7 550 aa6.42□□□□□ -1.38
APC-208ENST00000508624 PPP2R1AP30153 589 aa6.42□□□□□ -1.38
APC-208ENST00000508624 HSP90AB4PQ58FF6 505 aa6.42□□□□□ -1.38
APC-208ENST00000508624 C14orf37Q86TY3 774 aa6.42□□□□□ -1.38
APC-208ENST00000508624 DIAPH1O60610 1272 aaKnown RBP6.42□□□□□ -1.38
APC-208ENST00000508624 VSIG10Q8N0Z9 540 aa6.42□□□□□ -1.38
APC-208ENST00000508624 INSRP06213 1382 aa6.41□□□□□ -1.38
APC-208ENST00000508624 ARHGAP5Q13017 1502 aa6.41□□□□□ -1.38
APC-208ENST00000508624 KIF14Q15058 1648 aa6.41□□□□□ -1.38
APC-208ENST00000508624 GNL2Q13823 731 aaKnown RBP6.41□□□□□ -1.38
APC-208ENST00000508624 BICRAQ9NZM4 1560 aa6.41□□□□□ -1.38
APC-208ENST00000508624 NESP48681 1621 aa6.41□□□□□ -1.38
APC-208ENST00000508624 EIF2AK4Q9P2K8 1649 aaKnown RBP6.41□□□□□ -1.38
APC-208ENST00000508624 KIAA0586Q9BVV6 1533 aa6.41□□□□□ -1.38
APC-208ENST00000508624 TEX35Q5T0J7 233 aa6.41□□□□□ -1.38
APC-208ENST00000508624 NKTRP30414 1462 aaKnown RBP6.4□□□□□ -1.38
APC-208ENST00000508624 SLC4A3P48751 1232 aa6.4□□□□□ -1.38
APC-208ENST00000508624 PAK3O75914 559 aaPredicted RBP6.4□□□□□ -1.38
APC-208ENST00000508624 TNNT3P45378 269 aaPredicted RBP6.4□□□□□ -1.38
APC-208ENST00000508624 ADAMTS8Q9UP79 889 aa6.4□□□□□ -1.38
APC-208ENST00000508624 ZKSCAN1P17029 563 aaPredicted RBP6.4□□□□□ -1.38
APC-208ENST00000508624 RNF20Q5VTR2 975 aa6.4□□□□□ -1.38
APC-208ENST00000508624 ABCC11Q96J66 1382 aa6.4□□□□□ -1.38
APC-208ENST00000508624 MRC2Q9UBG0 1479 aa6.4□□□□□ -1.39
APC-208ENST00000508624 RALGAPBQ86X10 1494 aa6.4□□□□□ -1.39
APC-208ENST00000508624 NBPF8Q3BBV2 869 aa6.39□□□□□ -1.39
APC-208ENST00000508624 CAVIN1Q6NZI2 390 aaKnown RBP6.39□□□□□ -1.39
APC-208ENST00000508624 GGT6Q6P531 493 aa6.39□□□□□ -1.39
APC-208ENST00000508624 FAM184AQ8NB25 1140 aa6.39□□□□□ -1.39
APC-208ENST00000508624 UGGT2Q9NYU1 1516 aa6.39□□□□□ -1.39
APC-208ENST00000508624 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.39□□□□□ -1.39
APC-208ENST00000508624 NUP160Q12769 1436 aa6.39□□□□□ -1.39
APC-208ENST00000508624 ARHGEF12Q9NZN5 1544 aa6.39□□□□□ -1.39
APC-208ENST00000508624 GPRASP1Q5JY77 1395 aa6.39□□□□□ -1.39
APC-208ENST00000508624 MCM4P33991 863 aa6.39□□□□□ -1.39
APC-208ENST00000508624 COG3Q96JB2 828 aa6.39□□□□□ -1.39
APC-208ENST00000508624 NAP1L2Q9ULW6 460 aaPredicted RBP6.39□□□□□ -1.39
APC-208ENST00000508624 CAMSAP2Q08AD1 1489 aa6.39□□□□□ -1.39
APC-208ENST00000508624 PDCP20941 246 aa6.38□□□□□ -1.39
APC-208ENST00000508624 ARGLU1Q9NWB6 273 aaPredicted RBP6.38□□□□□ -1.39
APC-208ENST00000508624 BECN2A8MW95 431 aa6.38□□□□□ -1.39
APC-208ENST00000508624 C11orf95C9JLR9 678 aaPredicted RBP6.38□□□□□ -1.39
APC-208ENST00000508624 TCOF1Q13428 1488 aaKnown RBP6.38□□□□□ -1.39
APC-208ENST00000508624 MSH5O43196 834 aa6.38□□□□□ -1.39
APC-208ENST00000508624 CCP110O43303 1012 aa6.38□□□□□ -1.39
APC-208ENST00000508624 FRAT2O75474 233 aaPredicted RBP6.38□□□□□ -1.39
APC-208ENST00000508624 RPGRIP1LQ68CZ1 1315 aa6.38□□□□□ -1.39
APC-208ENST00000508624 RIPK4P57078 832 aa6.38□□□□□ -1.39
APC-208ENST00000508624 GRPEL1Q9HAV7 217 aa6.38□□□□□ -1.39
APC-208ENST00000508624 HOOK1Q9UJC3 728 aaKnown RBP6.38□□□□□ -1.39
APC-208ENST00000508624 CCDC66A2RUB6 948 aa6.38□□□□□ -1.39
APC-208ENST00000508624 SLFN5Q08AF3 891 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms