RNA–Protein interactions for RNA: ENST00000508550.5

CCSER1-207, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 716 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-207ENST00000508550 PLEKHD1A6NEE1 506 aa12.07□□□□□ -0.48
CCSER1-207ENST00000508550 CHD1O14646 1710 aa12.07□□□□□ -0.48
CCSER1-207ENST00000508550 PDE4AP27815 886 aa12.07□□□□□ -0.48
CCSER1-207ENST00000508550 FGD6Q6ZV73 1430 aa12.07□□□□□ -0.48
CCSER1-207ENST00000508550 PLB1Q6P1J6 1458 aa12.06□□□□□ -0.48
CCSER1-207ENST00000508550 ARHGAP33O14559 1287 aa12.05□□□□□ -0.48
CCSER1-207ENST00000508550 AXIN2Q9Y2T1 843 aa12.05□□□□□ -0.48
CCSER1-207ENST00000508550 TCOF1Q13428 1488 aaKnown RBP12.05□□□□□ -0.48
CCSER1-207ENST00000508550 SUPT6HQ7KZ85 1726 aaKnown RBP12.05□□□□□ -0.48
CCSER1-207ENST00000508550 ATP10BO94823 1461 aa12.04□□□□□ -0.48
CCSER1-207ENST00000508550 PPP1R15BQ5SWA1 713 aa12.04□□□□□ -0.48
CCSER1-207ENST00000508550 ABCC2Q92887 1545 aa12.02□□□□□ -0.48
CCSER1-207ENST00000508550 TTBK1Q5TCY1 1321 aaPredicted RBP12.02□□□□□ -0.49
CCSER1-207ENST00000508550 AKNAQ7Z591 1439 aa12.01□□□□□ -0.49
CCSER1-207ENST00000508550 MAGI3Q5TCQ9 1506 aa12.01□□□□□ -0.49
CCSER1-207ENST00000508550 RSPH4AQ5TD94 716 aa12□□□□□ -0.49
CCSER1-207ENST00000508550 CDK13Q14004 1512 aaKnown RBP12□□□□□ -0.49
CCSER1-207ENST00000508550 KDM5BQ9UGL1 1544 aa12□□□□□ -0.49
CCSER1-207ENST00000508550 MFSD10Q14728 455 aa11.98□□□□□ -0.49
CCSER1-207ENST00000508550 PPP4R3BQ5MIZ7 849 aa11.98□□□□□ -0.49
CCSER1-207ENST00000508550 ADCY10Q96PN6 1610 aa11.97□□□□□ -0.49
CCSER1-207ENST00000508550 ROCK1Q13464 1354 aa11.97□□□□□ -0.49
CCSER1-207ENST00000508550 ANO8Q9HCE9 1232 aaPredicted RBP11.97□□□□□ -0.49
CCSER1-207ENST00000508550 LRRIQ1Q96JM4 1722 aa11.97□□□□□ -0.49
CCSER1-207ENST00000508550 SETD5Q9C0A6 1442 aa11.96□□□□□ -0.49
CCSER1-207ENST00000508550 TK2O00142 265 aa11.96□□□□□ -0.49
CCSER1-207ENST00000508550 ADGRD1Q6QNK2 874 aa11.96□□□□□ -0.49
CCSER1-207ENST00000508550 CCER1Q8TC90 406 aaPredicted RBP11.96□□□□□ -0.49
CCSER1-207ENST00000508550 UPF1Q92900 1129 aaKnown RBP eCLIP11.96□□□□□ -0.49
CCSER1-207ENST00000508550 LARP6Q9BRS8 491 aaKnown RBP11.96□□□□□ -0.49
CCSER1-207ENST00000508550 HFM1A2PYH4 1435 aa11.95□□□□□ -0.5
CCSER1-207ENST00000508550 FAM50AQ14320 339 aaKnown RBP11.95□□□□□ -0.5
CCSER1-207ENST00000508550 GPATCH8Q9UKJ3 1502 aaKnown RBP11.95□□□□□ -0.5
CCSER1-207ENST00000508550 ABCC10Q5T3U5 1492 aa11.95□□□□□ -0.5
CCSER1-207ENST00000508550 DDX27Q96GQ7 796 aaKnown RBP11.94□□□□□ -0.5
CCSER1-207ENST00000508550 PSEN2P49810 448 aa11.93□□□□□ -0.5
CCSER1-207ENST00000508550 DMRTA1Q5VZB9 504 aa11.93□□□□□ -0.5
CCSER1-207ENST00000508550 CFDP1Q9UEE9 299 aaPredicted RBP11.93□□□□□ -0.5
CCSER1-207ENST00000508550 HRO43593 1189 aa11.92□□□□□ -0.5
CCSER1-207ENST00000508550 KIF14Q15058 1648 aa11.91□□□□□ -0.5
CCSER1-207ENST00000508550 PTPN23Q9H3S7 1636 aa11.91□□□□□ -0.5
CCSER1-207ENST00000508550 FOSBP53539 338 aa11.9□□□□□ -0.5
CCSER1-207ENST00000508550 CADPS2Q86UW7 1296 aa11.9□□□□□ -0.5
CCSER1-207ENST00000508550 TIMELESSQ9UNS1 1208 aa11.9□□□□□ -0.5
CCSER1-207ENST00000508550 KIAA1107Q9UPP5 1409 aa11.9□□□□□ -0.5
CCSER1-207ENST00000508550 ARAP3Q8WWN8 1544 aa11.9□□□□□ -0.5
CCSER1-207ENST00000508550 PLEKHH2Q8IVE3 1493 aa11.89□□□□□ -0.51
CCSER1-207ENST00000508550 ERCC6L2Q5T890 1561 aa11.89□□□□□ -0.51
CCSER1-207ENST00000508550 RAB3GAP2Q9H2M9 1393 aa11.89□□□□□ -0.51
CCSER1-207ENST00000508550 BBXQ8WY36 941 aaPredicted RBP11.88□□□□□ -0.51
CCSER1-207ENST00000508550 BCL2L12Q9HB09 334 aa11.88□□□□□ -0.51
CCSER1-207ENST00000508550 EVI5O60447 810 aa11.87□□□□□ -0.51
CCSER1-207ENST00000508550 ZNF454Q8N9F8 522 aa11.87□□□□□ -0.51
CCSER1-207ENST00000508550 DHX57Q6P158 1386 aaKnown RBP11.87□□□□□ -0.51
CCSER1-207ENST00000508550 SHANK2Q9UPX8 1470 aa11.87□□□□□ -0.51
CCSER1-207ENST00000508550 ITSN2Q9NZM3 1697 aa11.87□□□□□ -0.51
CCSER1-207ENST00000508550 PLCH2O75038 1416 aa11.86□□□□□ -0.51
CCSER1-207ENST00000508550 DAPK1P53355 1430 aa11.86□□□□□ -0.51
CCSER1-207ENST00000508550 NAIPQ13075 1403 aa11.86□□□□□ -0.51
CCSER1-207ENST00000508550 EMILIN3Q9NT22 766 aa11.86□□□□□ -0.51
CCSER1-207ENST00000508550 ABCC5O15440 1437 aa11.86□□□□□ -0.51
CCSER1-207ENST00000508550 PTPRKQ15262 1439 aa11.86□□□□□ -0.51
CCSER1-207ENST00000508550 ADGRL2O95490 1459 aa11.85□□□□□ -0.51
CCSER1-207ENST00000508550 KCNK17Q96T54 332 aa11.85□□□□□ -0.51
CCSER1-207ENST00000508550 SLC4A5Q9BY07 1137 aa11.85□□□□□ -0.51
CCSER1-207ENST00000508550 WDR7Q9Y4E6 1490 aa11.84□□□□□ -0.51
CCSER1-207ENST00000508550 MAP3K9P80192 1104 aa11.84□□□□□ -0.51
CCSER1-207ENST00000508550 KCNH8Q96L42 1107 aa11.84□□□□□ -0.51
CCSER1-207ENST00000508550 ARID3CA6NKF2 412 aa11.83□□□□□ -0.52
CCSER1-207ENST00000508550 TSPY4P0CV99 314 aa11.83□□□□□ -0.52
CCSER1-207ENST00000508550 TSPY10P0CW01 314 aa11.83□□□□□ -0.52
CCSER1-207ENST00000508550 EFCAB2Q5VUJ9 269 aa11.83□□□□□ -0.52
CCSER1-207ENST00000508550 CAMSAP2Q08AD1 1489 aa11.83□□□□□ -0.52
CCSER1-207ENST00000508550 VPS9D1Q9Y2B5 631 aa11.82□□□□□ -0.52
CCSER1-207ENST00000508550 NCOA1Q15788 1441 aa11.82□□□□□ -0.52
CCSER1-207ENST00000508550 ARHGEF5Q12774 1597 aa11.82□□□□□ -0.52
CCSER1-207ENST00000508550 DNMT1P26358 1616 aaKnown RBP11.82□□□□□ -0.52
CCSER1-207ENST00000508550 ANKRD30AQ9BXX3 1397 aa11.81□□□□□ -0.52
CCSER1-207ENST00000508550 ITGAEP38570 1179 aa11.81□□□□□ -0.52
CCSER1-207ENST00000508550 CAMK2BQ13554 666 aa11.81□□□□□ -0.52
CCSER1-207ENST00000508550 HCSTQ9UBK5 93 aa11.81□□□□□ -0.52
CCSER1-207ENST00000508550 MBD5Q9P267 1494 aa11.81□□□□□ -0.52
CCSER1-207ENST00000508550 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.81□□□□□ -0.52
CCSER1-207ENST00000508550 ZCCHC11Q5TAX3 1644 aaKnown RBP11.8□□□□□ -0.52
CCSER1-207ENST00000508550 PTPREP23469 700 aa11.79□□□□□ -0.52
CCSER1-207ENST00000508550 AMER1Q5JTC6 1135 aaPredicted RBP11.79□□□□□ -0.52
CCSER1-207ENST00000508550 ZDHHC16Q969W1 377 aa11.79□□□□□ -0.52
CCSER1-207ENST00000508550 ASXL2Q76L83 1435 aa11.77□□□□□ -0.52
CCSER1-207ENST00000508550 CCDC141Q6ZP82 1450 aa11.77□□□□□ -0.52
CCSER1-207ENST00000508550 ADAM33Q9BZ11 813 aa11.77□□□□□ -0.53
CCSER1-207ENST00000508550 PREX2Q70Z35 1606 aa11.77□□□□□ -0.53
CCSER1-207ENST00000508550 ZNF644Q9H582 1327 aaPredicted RBP11.77□□□□□ -0.53
CCSER1-207ENST00000508550 RTEL1-TNFRSF6BF6WH68 1400 aa11.77□□□□□ -0.53
CCSER1-207ENST00000508550 BHMG1C9JSJ3 638 aaPredicted RBP11.76□□□□□ -0.53
CCSER1-207ENST00000508550 ZBED2Q9BTP6 218 aa11.76□□□□□ -0.53
CCSER1-207ENST00000508550 C9orf84Q5VXU9 1444 aa11.75□□□□□ -0.53
CCSER1-207ENST00000508550 MAPKBP1O60336 1514 aa11.75□□□□□ -0.53
CCSER1-207ENST00000508550 MAST1Q9Y2H9 1570 aa11.75□□□□□ -0.53
CCSER1-207ENST00000508550 STAC3Q96MF2 364 aa11.74□□□□□ -0.53
CCSER1-207ENST00000508550 PCDHGA10Q9Y5H3 936 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms