RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 VSIG10Q8N0Z9 540 aa10.39□□□□□ -0.75
PDLIM5-211ENST00000508531 PXYLP1Q8TE99 480 aa10.39□□□□□ -0.75
PDLIM5-211ENST00000508531 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-211ENST00000508531 GNPATO15228 680 aa10.38□□□□□ -0.75
PDLIM5-211ENST00000508531 GPR37O15354 613 aa10.38□□□□□ -0.75
PDLIM5-211ENST00000508531 IRX2Q9BZI1 471 aaPredicted RBP10.38□□□□□ -0.75
PDLIM5-211ENST00000508531 OATP04181 439 aa10.37□□□□□ -0.75
PDLIM5-211ENST00000508531 NKX2-3Q8TAU0 364 aa10.37□□□□□ -0.75
PDLIM5-211ENST00000508531 PRR14Q9BWN1 585 aa10.36□□□□□ -0.75
PDLIM5-211ENST00000508531 PCDHB3Q9Y5E6 796 aa10.36□□□□□ -0.75
PDLIM5-211ENST00000508531 PPP1R18Q6NYC8 613 aa10.35□□□□□ -0.75
PDLIM5-211ENST00000508531 METTL3Q86U44 580 aaKnown RBP10.35□□□□□ -0.75
PDLIM5-211ENST00000508531 GPIHBP1Q8IV16 184 aa10.35□□□□□ -0.75
PDLIM5-211ENST00000508531 CFHP08603 1231 aa10.34□□□□□ -0.75
PDLIM5-211ENST00000508531 ZPR1O75312 459 aa10.33□□□□□ -0.76
PDLIM5-211ENST00000508531 SLC10A3P09131 477 aa10.33□□□□□ -0.76
PDLIM5-211ENST00000508531 KMT5BQ4FZB7 885 aa10.33□□□□□ -0.76
PDLIM5-211ENST00000508531 BLOC1S3Q6QNY0 202 aa10.33□□□□□ -0.76
PDLIM5-211ENST00000508531 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-211ENST00000508531 ACTN4O43707 911 aaKnown RBP10.3□□□□□ -0.76
PDLIM5-211ENST00000508531 NLRP7Q8WX94 980 aa10.3□□□□□ -0.76
PDLIM5-211ENST00000508531 PRKD2Q9BZL6 878 aa10.29□□□□□ -0.76
PDLIM5-211ENST00000508531 TLL1O43897 1013 aa10.28□□□□□ -0.76
PDLIM5-211ENST00000508531 GGCXP38435 758 aa10.26□□□□□ -0.77
PDLIM5-211ENST00000508531 DAXXQ9UER7 740 aaPredicted RBP10.26□□□□□ -0.77
PDLIM5-211ENST00000508531 RDH13Q8NBN7 331 aa10.25□□□□□ -0.77
PDLIM5-211ENST00000508531 PHOX2BQ99453 314 aa10.25□□□□□ -0.77
PDLIM5-211ENST00000508531 TULP1O00294 542 aaPredicted RBP10.24□□□□□ -0.77
PDLIM5-211ENST00000508531 RSPH4AQ5TD94 716 aa10.24□□□□□ -0.77
PDLIM5-211ENST00000508531 DDX11L8A8MPP1 907 aa10.23□□□□□ -0.77
PDLIM5-211ENST00000508531 PUS10Q3MIT2 529 aaKnown RBP10.23□□□□□ -0.77
PDLIM5-211ENST00000508531 NR1I2O75469 434 aa10.21□□□□□ -0.77
PDLIM5-211ENST00000508531 TMUB1Q9BVT8 246 aa10.21□□□□□ -0.77
PDLIM5-211ENST00000508531 V9GY48 417 aaPredicted RBP10.21□□□□□ -0.77
PDLIM5-211ENST00000508531 RNF223E7ERA6 249 aa10.2□□□□□ -0.78
PDLIM5-211ENST00000508531 Q6ZNB5 142 aa10.2□□□□□ -0.78
PDLIM5-211ENST00000508531 S1PR4O95977 384 aa10.19□□□□□ -0.78
PDLIM5-211ENST00000508531 ADH1BP00325 375 aa10.19□□□□□ -0.78
PDLIM5-211ENST00000508531 MAP2K5Q13163 448 aa10.19□□□□□ -0.78
PDLIM5-211ENST00000508531 PPEF1O14829 653 aaPredicted RBP10.18□□□□□ -0.78
PDLIM5-211ENST00000508531 GFRA3O60609 400 aa10.18□□□□□ -0.78
PDLIM5-211ENST00000508531 SCUBE3Q8IX30 993 aa10.18□□□□□ -0.78
PDLIM5-211ENST00000508531 SULF1Q8IWU6 871 aa10.17□□□□□ -0.78
PDLIM5-211ENST00000508531 FUT2Q10981 343 aa10.16□□□□□ -0.78
PDLIM5-211ENST00000508531 GCGRP47871 477 aa10.15□□□□□ -0.78
PDLIM5-211ENST00000508531 LAPTM4AQ15012 233 aa10.15□□□□□ -0.78
PDLIM5-211ENST00000508531 IRF6O14896 467 aa10.14□□□□□ -0.79
PDLIM5-211ENST00000508531 MORN1Q5T089 497 aa10.14□□□□□ -0.79
PDLIM5-211ENST00000508531 EMID1Q96A84 441 aaPredicted RBP10.14□□□□□ -0.79
PDLIM5-211ENST00000508531 SLC6A16Q9GZN6 736 aa10.14□□□□□ -0.79
PDLIM5-211ENST00000508531 ATP6V1AP38606 617 aa10.13□□□□□ -0.79
PDLIM5-211ENST00000508531 ANKLE1Q8NAG6 615 aa10.13□□□□□ -0.79
PDLIM5-211ENST00000508531 SPSB2Q99619 263 aa10.13□□□□□ -0.79
PDLIM5-211ENST00000508531 MINK1Q8N4C8 1332 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-211ENST00000508531 SLC19A1P41440 591 aa10.12□□□□□ -0.79
PDLIM5-211ENST00000508531 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.12□□□□□ -0.79
PDLIM5-211ENST00000508531 NRG2O14511 850 aaPredicted RBP10.11□□□□□ -0.79
PDLIM5-211ENST00000508531 CCDC102AQ96A19 550 aa10.11□□□□□ -0.79
PDLIM5-211ENST00000508531 MDM2Q00987 491 aaPredicted RBP10.1□□□□□ -0.79
PDLIM5-211ENST00000508531 PDZRN3Q9UPQ7 1066 aa10.1□□□□□ -0.79
PDLIM5-211ENST00000508531 SLC27A5Q9Y2P5 690 aa10.1□□□□□ -0.79
PDLIM5-211ENST00000508531 LMOD2Q6P5Q4 547 aa10.09□□□□□ -0.79
PDLIM5-211ENST00000508531 CD46P15529 392 aa10.08□□□□□ -0.8
PDLIM5-211ENST00000508531 PLA2G2CQ5R387 149 aa10.08□□□□□ -0.8
PDLIM5-211ENST00000508531 LIAT1Q6ZQX7 453 aa10.08□□□□□ -0.8
PDLIM5-211ENST00000508531 THAP11Q96EK4 314 aa10.08□□□□□ -0.8
PDLIM5-211ENST00000508531 FMNL1O95466 1100 aaPredicted RBP10.07□□□□□ -0.8
PDLIM5-211ENST00000508531 SPRYD7Q5W111 196 aa10.07□□□□□ -0.8
PDLIM5-211ENST00000508531 LCE2BO14633 110 aa10.06□□□□□ -0.8
PDLIM5-211ENST00000508531 GRIPAP1Q4V328 841 aa10.05□□□□□ -0.8
PDLIM5-211ENST00000508531 TRAF7Q6Q0C0 670 aa10.04□□□□□ -0.8
PDLIM5-211ENST00000508531 RNF19BQ6ZMZ0 732 aa10.04□□□□□ -0.8
PDLIM5-211ENST00000508531 TRIM67Q6ZTA4 783 aa10.04□□□□□ -0.8
PDLIM5-211ENST00000508531 ZNF598Q86UK7 904 aaKnown RBP10.04□□□□□ -0.8
PDLIM5-211ENST00000508531 FAM160A2Q8N612 972 aaPredicted RBP10.04□□□□□ -0.8
PDLIM5-211ENST00000508531 PRDM9Q9NQV7 894 aa10.04□□□□□ -0.8
PDLIM5-211ENST00000508531 ZNF697Q5TEC3 545 aa10.03□□□□□ -0.8
PDLIM5-211ENST00000508531 BRICD5Q6PL45 260 aa10.03□□□□□ -0.8
PDLIM5-211ENST00000508531 KDM4AO75164 1064 aa10.02□□□□□ -0.81
PDLIM5-211ENST00000508531 GPCPD1Q9NPB8 672 aa10.02□□□□□ -0.81
PDLIM5-211ENST00000508531 FCF1Q9Y324 198 aaKnown RBP10.02□□□□□ -0.81
PDLIM5-211ENST00000508531 SALL2Q9Y467 1007 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-211ENST00000508531 CLCN1P35523 988 aa10.01□□□□□ -0.81
PDLIM5-211ENST00000508531 KRI1Q8N9T8 703 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-211ENST00000508531 HLA-CQ95604 372 aa10□□□□□ -0.81
PDLIM5-211ENST00000508531 FAM217BQ9NTX9 383 aaPredicted RBP10□□□□□ -0.81
PDLIM5-211ENST00000508531 TNFRSF10AO00220 468 aa9.98□□□□□ -0.81
PDLIM5-211ENST00000508531 Q3C1V9 767 aa9.98□□□□□ -0.81
PDLIM5-211ENST00000508531 MSS51Q4VC12 460 aa9.98□□□□□ -0.81
PDLIM5-211ENST00000508531 ZC3H15Q8WU90 426 aaKnown RBP9.98□□□□□ -0.81
PDLIM5-211ENST00000508531 REPIN1Q9BWE0 567 aaKnown RBP9.98□□□□□ -0.81
PDLIM5-211ENST00000508531 ZMYND10O75800 440 aa9.97□□□□□ -0.81
PDLIM5-211ENST00000508531 PRR20EP86478 221 aa9.97□□□□□ -0.81
PDLIM5-211ENST00000508531 PRR20CP86479 221 aa9.97□□□□□ -0.81
PDLIM5-211ENST00000508531 PRR20DP86480 221 aa9.97□□□□□ -0.81
PDLIM5-211ENST00000508531 PRR20BP86481 221 aa9.97□□□□□ -0.81
PDLIM5-211ENST00000508531 PRR20AP86496 221 aa9.97□□□□□ -0.81
PDLIM5-211ENST00000508531 BARGINQ6ZT62 677 aa9.97□□□□□ -0.81
PDLIM5-211ENST00000508531 HOXA2O43364 376 aa9.96□□□□□ -0.82
PDLIM5-211ENST00000508531 GDF9O60383 454 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms