RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.01□□□□□ -0.81
PDGFRA-206ENST00000508170 MINK1Q8N4C8 1332 aaPredicted RBP10□□□□□ -0.81
PDGFRA-206ENST00000508170 NOP9Q86U38 636 aaKnown RBP10□□□□□ -0.81
PDGFRA-206ENST00000508170 hCG_2014768A0A024R1R8 64 aa9.99□□□□□ -0.81
PDGFRA-206ENST00000508170 KRBA2Q6ZNG9 492 aa9.99□□□□□ -0.81
PDGFRA-206ENST00000508170 PNMA2Q9UL42 364 aa9.99□□□□□ -0.81
PDGFRA-206ENST00000508170 FAN1Q9Y2M0 1017 aa9.99□□□□□ -0.81
PDGFRA-206ENST00000508170 U2SURPO15042 1029 aaKnown RBP9.99□□□□□ -0.81
PDGFRA-206ENST00000508170 SH3BP5O60239 455 aa9.99□□□□□ -0.81
PDGFRA-206ENST00000508170 APLP1P51693 650 aa9.99□□□□□ -0.81
PDGFRA-206ENST00000508170 TTLL12Q14166 644 aaPredicted RBP9.99□□□□□ -0.81
PDGFRA-206ENST00000508170 OXER1Q8TDS5 423 aa9.99□□□□□ -0.81
PDGFRA-206ENST00000508170 SPOCK3Q9BQ16 436 aa9.99□□□□□ -0.81
PDGFRA-206ENST00000508170 TMEM88BA6NKF7 163 aa9.98□□□□□ -0.81
PDGFRA-206ENST00000508170 IGBP1P78318 339 aa9.98□□□□□ -0.81
PDGFRA-206ENST00000508170 SNRKQ9NRH2 765 aa9.98□□□□□ -0.81
PDGFRA-206ENST00000508170 PTPROQ16827 1216 aa9.97□□□□□ -0.81
PDGFRA-206ENST00000508170 EGFLAMQ63HQ2 1017 aa9.97□□□□□ -0.81
PDGFRA-206ENST00000508170 IPO4Q8TEX9 1081 aaKnown RBP9.97□□□□□ -0.81
PDGFRA-206ENST00000508170 LNPKQ9C0E8 428 aa9.97□□□□□ -0.81
PDGFRA-206ENST00000508170 EIF3JO75822 258 aaKnown RBP9.97□□□□□ -0.81
PDGFRA-206ENST00000508170 CCER2I3L3R5 266 aa9.96□□□□□ -0.82
PDGFRA-206ENST00000508170 MAP2K5Q13163 448 aa9.96□□□□□ -0.82
PDGFRA-206ENST00000508170 CFAP70Q5T0N1 1121 aa9.96□□□□□ -0.82
PDGFRA-206ENST00000508170 DCAF8Q5TAQ9 597 aa9.96□□□□□ -0.82
PDGFRA-206ENST00000508170 MAF1Q9H063 256 aa9.96□□□□□ -0.82
PDGFRA-206ENST00000508170 GDPD2Q9HCC8 539 aa9.96□□□□□ -0.82
PDGFRA-206ENST00000508170 GABBR1Q9UBS5 961 aa9.96□□□□□ -0.82
PDGFRA-206ENST00000508170 IRF6O14896 467 aa9.95□□□□□ -0.82
PDGFRA-206ENST00000508170 RECKO95980 971 aa9.95□□□□□ -0.82
PDGFRA-206ENST00000508170 CLEC4GQ6UXB4 293 aa9.95□□□□□ -0.82
PDGFRA-206ENST00000508170 KCNB2Q92953 911 aa9.95□□□□□ -0.82
PDGFRA-206ENST00000508170 SPACA7Q96KW9 195 aa9.95□□□□□ -0.82
PDGFRA-206ENST00000508170 TLDC2A0PJX2 215 aa9.95□□□□□ -0.82
PDGFRA-206ENST00000508170 ARID4AP29374 1257 aaPredicted RBP9.95□□□□□ -0.82
PDGFRA-206ENST00000508170 MYBPC2Q14324 1141 aa9.95□□□□□ -0.82
PDGFRA-206ENST00000508170 CHPF2Q9P2E5 772 aa9.95□□□□□ -0.82
PDGFRA-206ENST00000508170 VAMP1P23763 118 aa9.94□□□□□ -0.82
PDGFRA-206ENST00000508170 NUBP1P53384 320 aa9.94□□□□□ -0.82
PDGFRA-206ENST00000508170 NPAS4Q8IUM7 802 aa9.94□□□□□ -0.82
PDGFRA-206ENST00000508170 FAM193AP78312 1265 aa9.94□□□□□ -0.82
PDGFRA-206ENST00000508170 GIGYF2Q6Y7W6 1299 aaKnown RBP9.94□□□□□ -0.82
PDGFRA-206ENST00000508170 CCER1Q8TC90 406 aaPredicted RBP9.93□□□□□ -0.82
PDGFRA-206ENST00000508170 HSP90AB2PQ58FF8 381 aa9.92□□□□□ -0.82
PDGFRA-206ENST00000508170 MAMSTRQ6ZN01 415 aa9.92□□□□□ -0.82
PDGFRA-206ENST00000508170 RINLQ6ZS11 566 aa9.92□□□□□ -0.82
PDGFRA-206ENST00000508170 PROCA1Q8NCQ7 364 aaPredicted RBP9.92□□□□□ -0.82
PDGFRA-206ENST00000508170 CCDC180Q9P1Z9 1646 aa9.92□□□□□ -0.82
PDGFRA-206ENST00000508170 RTL5Q5HYW3 569 aaPredicted RBP9.92□□□□□ -0.82
PDGFRA-206ENST00000508170 SDE2Q6IQ49 451 aa9.91□□□□□ -0.82
PDGFRA-206ENST00000508170 FTSJ3Q8IY81 847 aaKnown RBP9.91□□□□□ -0.82
PDGFRA-206ENST00000508170 NCKAP5LQ9HCH0 1330 aa9.91□□□□□ -0.82
PDGFRA-206ENST00000508170 KIF4AO95239 1232 aa9.91□□□□□ -0.82
PDGFRA-206ENST00000508170 TSHZ1Q6ZSZ6 1077 aa9.91□□□□□ -0.82
PDGFRA-206ENST00000508170 C4orf46Q504U0 113 aa9.89□□□□□ -0.83
PDGFRA-206ENST00000508170 NLGN1Q8N2Q7 840 aa9.89□□□□□ -0.83
PDGFRA-206ENST00000508170 PPP1R37O75864 691 aa9.88□□□□□ -0.83
PDGFRA-206ENST00000508170 ERCC5P28715 1186 aaPredicted RBP9.88□□□□□ -0.83
PDGFRA-206ENST00000508170 TBX22Q9Y458 520 aa9.88□□□□□ -0.83
PDGFRA-206ENST00000508170 EXOC5O00471 708 aa9.87□□□□□ -0.83
PDGFRA-206ENST00000508170 PHF14O94880 888 aa9.87□□□□□ -0.83
PDGFRA-206ENST00000508170 DEKP35659 375 aaKnown RBP9.87□□□□□ -0.83
PDGFRA-206ENST00000508170 MFRPQ9BY79 579 aa9.87□□□□□ -0.83
PDGFRA-206ENST00000508170 WDR78Q5VTH9 848 aa9.86□□□□□ -0.83
PDGFRA-206ENST00000508170 CCDC146Q8IYE0 955 aa9.86□□□□□ -0.83
PDGFRA-206ENST00000508170 ADAMTS19Q8TE59 1207 aa9.86□□□□□ -0.83
PDGFRA-206ENST00000508170 LARP6Q9BRS8 491 aaKnown RBP9.86□□□□□ -0.83
PDGFRA-206ENST00000508170 TANGO6Q9C0B7 1094 aa9.86□□□□□ -0.83
PDGFRA-206ENST00000508170 GNL3LQ9NVN8 582 aaKnown RBP9.86□□□□□ -0.83
PDGFRA-206ENST00000508170 ATP1B4Q9UN42 357 aaPredicted RBP9.86□□□□□ -0.83
PDGFRA-206ENST00000508170 ABL2P42684 1182 aa9.86□□□□□ -0.83
PDGFRA-206ENST00000508170 CCDC144BQ3MJ40 725 aa9.86□□□□□ -0.83
PDGFRA-206ENST00000508170 GLIPR1L2Q4G1C9 344 aa9.86□□□□□ -0.83
PDGFRA-206ENST00000508170 REPIN1Q9BWE0 567 aaKnown RBP9.86□□□□□ -0.83
PDGFRA-206ENST00000508170 CUEDC1Q9NWM3 386 aaPredicted RBP9.86□□□□□ -0.83
PDGFRA-206ENST00000508170 NOP58Q9Y2X3 529 aaKnown RBP9.86□□□□□ -0.83
PDGFRA-206ENST00000508170 PDAP1Q13442 181 aaKnown RBP9.85□□□□□ -0.83
PDGFRA-206ENST00000508170 LIG1P18858 919 aa9.84□□□□□ -0.83
PDGFRA-206ENST00000508170 IBSPP21815 317 aaPredicted RBP9.84□□□□□ -0.83
PDGFRA-206ENST00000508170 ZNF467Q7Z7K2 595 aaPredicted RBP9.84□□□□□ -0.83
PDGFRA-206ENST00000508170 C11orf96Q7Z7L8 435 aa9.84□□□□□ -0.83
PDGFRA-206ENST00000508170 C7P10643 843 aa9.84□□□□□ -0.83
PDGFRA-206ENST00000508170 MARSP56192 900 aaKnown RBP9.83□□□□□ -0.84
PDGFRA-206ENST00000508170 TSNAXIP1Q2TAA8 658 aa9.83□□□□□ -0.84
PDGFRA-206ENST00000508170 SDR16C5Q8N3Y7 309 aa9.83□□□□□ -0.84
PDGFRA-206ENST00000508170 PIF1Q9H611 641 aa9.83□□□□□ -0.84
PDGFRA-206ENST00000508170 COMMD10Q9Y6G5 202 aa9.83□□□□□ -0.84
PDGFRA-206ENST00000508170 WDHD1O75717 1129 aaPredicted RBP9.83□□□□□ -0.84
PDGFRA-206ENST00000508170 TAGLNQ01995 201 aaKnown RBP9.83□□□□□ -0.84
PDGFRA-206ENST00000508170 TCEAL1Q15170 157 aa9.83□□□□□ -0.84
PDGFRA-206ENST00000508170 MTMR14Q8NCE2 650 aa9.83□□□□□ -0.84
PDGFRA-206ENST00000508170 DHX38Q92620 1227 aaKnown RBP9.83□□□□□ -0.84
PDGFRA-206ENST00000508170 BANK1Q8NDB2 785 aa9.82□□□□□ -0.84
PDGFRA-206ENST00000508170 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.82□□□□□ -0.84
PDGFRA-206ENST00000508170 BDNFP23560 247 aa9.82□□□□□ -0.84
PDGFRA-206ENST00000508170 HDGFL1Q5TGJ6 251 aa9.82□□□□□ -0.84
PDGFRA-206ENST00000508170 CACTIN-AS1Q8N1I8 211 aa9.82□□□□□ -0.84
PDGFRA-206ENST00000508170 ANKRD33BA6NCL7 494 aa9.81□□□□□ -0.84
PDGFRA-206ENST00000508170 ANP32CO43423 234 aa9.81□□□□□ -0.84
PDGFRA-206ENST00000508170 PPP1R12CQ9BZL4 782 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms