RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 IQGAP1P46940 1657 aa17.55■□□□□ 0.4
SNCAIP-209ENST00000508017 FAM161AQ3B820 660 aa17.54■□□□□ 0.4
SNCAIP-209ENST00000508017 MADDQ8WXG6 1647 aa17.54■□□□□ 0.4
SNCAIP-209ENST00000508017 CCDC146Q8IYE0 955 aa17.53■□□□□ 0.4
SNCAIP-209ENST00000508017 RGS3P49796 1198 aa17.52■□□□□ 0.4
SNCAIP-209ENST00000508017 DUOX2Q9NRD8 1548 aa17.52■□□□□ 0.39
SNCAIP-209ENST00000508017 SLFN5Q08AF3 891 aa17.51■□□□□ 0.39
SNCAIP-209ENST00000508017 GSE1Q14687 1217 aa17.51■□□□□ 0.39
SNCAIP-209ENST00000508017 SPINK5Q9NQ38 1064 aaPredicted RBP17.51■□□□□ 0.39
SNCAIP-209ENST00000508017 BRPF3Q9ULD4 1205 aa17.51■□□□□ 0.39
SNCAIP-209ENST00000508017 SYNMO15061 1565 aa17.51■□□□□ 0.39
SNCAIP-209ENST00000508017 CLASP1Q7Z460 1538 aa17.5■□□□□ 0.39
SNCAIP-209ENST00000508017 DAXXQ9UER7 740 aaPredicted RBP17.5■□□□□ 0.39
SNCAIP-209ENST00000508017 MYOM1P52179 1685 aa17.5■□□□□ 0.39
SNCAIP-209ENST00000508017 ASXL1Q8IXJ9 1541 aa17.5■□□□□ 0.39
SNCAIP-209ENST00000508017 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.49■□□□□ 0.39
SNCAIP-209ENST00000508017 FRAT1Q92837 279 aaPredicted RBP17.48■□□□□ 0.39
SNCAIP-209ENST00000508017 PIK3C2GO75747 1445 aa17.47■□□□□ 0.39
SNCAIP-209ENST00000508017 BCAR3O75815 825 aa17.47■□□□□ 0.39
SNCAIP-209ENST00000508017 TRMT2AQ8IZ69 625 aaKnown RBP17.47■□□□□ 0.39
SNCAIP-209ENST00000508017 APAF1O14727 1248 aa17.46■□□□□ 0.39
SNCAIP-209ENST00000508017 SPHKAPQ2M3C7 1700 aa17.46■□□□□ 0.39
SNCAIP-209ENST00000508017 SCAF11Q99590 1463 aaKnown RBP17.45■□□□□ 0.38
SNCAIP-209ENST00000508017 DMRT2Q9Y5R5 561 aa17.45■□□□□ 0.38
SNCAIP-209ENST00000508017 NKTRP30414 1462 aaKnown RBP17.44■□□□□ 0.38
SNCAIP-209ENST00000508017 FRAT2O75474 233 aaPredicted RBP17.43■□□□□ 0.38
SNCAIP-209ENST00000508017 EIF3AQ14152 1382 aaKnown RBP17.43■□□□□ 0.38
SNCAIP-209ENST00000508017 ABCC2Q92887 1545 aa17.43■□□□□ 0.38
SNCAIP-209ENST00000508017 CEP152O94986 1710 aa17.43■□□□□ 0.38
SNCAIP-209ENST00000508017 CDCA8Q53HL2 280 aa17.42■□□□□ 0.38
SNCAIP-209ENST00000508017 IGHDP01880 384 aa17.42■□□□□ 0.38
SNCAIP-209ENST00000508017 VIRMAQ69YN4 1812 aaKnown RBP17.42■□□□□ 0.38
SNCAIP-209ENST00000508017 CLTCL1P53675 1640 aa17.41■□□□□ 0.38
SNCAIP-209ENST00000508017 TRPM2O94759 1503 aa17.4■□□□□ 0.38
SNCAIP-209ENST00000508017 KDM5AP29375 1690 aaKnown RBP17.4■□□□□ 0.38
SNCAIP-209ENST00000508017 SCAPERQ9BY12 1400 aa17.4■□□□□ 0.38
SNCAIP-209ENST00000508017 TRAPPC8Q9Y2L5 1435 aa17.4■□□□□ 0.38
SNCAIP-209ENST00000508017 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.39■□□□□ 0.37
SNCAIP-209ENST00000508017 NPC1L1Q9UHC9 1359 aa17.39■□□□□ 0.37
SNCAIP-209ENST00000508017 USP19O94966 1318 aa17.38■□□□□ 0.37
SNCAIP-209ENST00000508017 ERCC6L2Q5T890 1561 aa17.38■□□□□ 0.37
SNCAIP-209ENST00000508017 E9PSI1 815 aa17.37■□□□□ 0.37
SNCAIP-209ENST00000508017 ABCC1P33527 1531 aa17.37■□□□□ 0.37
SNCAIP-209ENST00000508017 CHD1O14646 1710 aa17.37■□□□□ 0.37
SNCAIP-209ENST00000508017 SEC24BO95487 1268 aa17.36■□□□□ 0.37
SNCAIP-209ENST00000508017 PRKCSHP14314 528 aaPredicted RBP17.36■□□□□ 0.37
SNCAIP-209ENST00000508017 PLCH2O75038 1416 aa17.36■□□□□ 0.37
SNCAIP-209ENST00000508017 CARD14Q9BXL6 1004 aa17.36■□□□□ 0.37
SNCAIP-209ENST00000508017 PANK1Q8TE04 598 aa17.35■□□□□ 0.37
SNCAIP-209ENST00000508017 PTPRTO14522 1441 aa17.34■□□□□ 0.37
SNCAIP-209ENST00000508017 COG6Q9Y2V7 657 aa17.34■□□□□ 0.37
SNCAIP-209ENST00000508017 ERVK-7P63135 1459 aa17.34■□□□□ 0.37
SNCAIP-209ENST00000508017 EFCAB2Q5VUJ9 269 aa17.33■□□□□ 0.37
SNCAIP-209ENST00000508017 CFAP70Q5T0N1 1121 aa17.32■□□□□ 0.36
SNCAIP-209ENST00000508017 CENPJQ9HC77 1338 aaPredicted RBP17.32■□□□□ 0.36
SNCAIP-209ENST00000508017 SHROOM2Q13796 1616 aa17.32■□□□□ 0.36
SNCAIP-209ENST00000508017 CLUAP1Q96AJ1 413 aa17.32■□□□□ 0.36
SNCAIP-209ENST00000508017 CGNL1Q0VF96 1302 aa17.32■□□□□ 0.36
SNCAIP-209ENST00000508017 AFAP1Q8N556 730 aa17.31■□□□□ 0.36
SNCAIP-209ENST00000508017 KIAA1210Q9ULL0 1709 aa17.31■□□□□ 0.36
SNCAIP-209ENST00000508017 CANXP27824 592 aaKnown RBP17.31■□□□□ 0.36
SNCAIP-209ENST00000508017 PDE3AQ14432 1141 aa17.31■□□□□ 0.36
SNCAIP-209ENST00000508017 SPAG9O60271 1321 aaKnown RBP17.31■□□□□ 0.36
SNCAIP-209ENST00000508017 WWC1Q8IX03 1113 aa17.3■□□□□ 0.36
SNCAIP-209ENST00000508017 ABCA6Q8N139 1617 aa17.3■□□□□ 0.36
SNCAIP-209ENST00000508017 TET3O43151 1660 aa17.29■□□□□ 0.36
SNCAIP-209ENST00000508017 UGGT1Q9NYU2 1555 aa17.29■□□□□ 0.36
SNCAIP-209ENST00000508017 ZFYVE16Q7Z3T8 1539 aa17.29■□□□□ 0.36
SNCAIP-209ENST00000508017 DEPDC5O75140 1603 aa17.29■□□□□ 0.36
SNCAIP-209ENST00000508017 ZCCHC11Q5TAX3 1644 aaKnown RBP17.29■□□□□ 0.36
SNCAIP-209ENST00000508017 NLRP1Q9C000 1473 aa17.29■□□□□ 0.36
SNCAIP-209ENST00000508017 NEUROD2Q15784 382 aa17.28■□□□□ 0.36
SNCAIP-209ENST00000508017 STAC3Q96MF2 364 aa17.28■□□□□ 0.36
SNCAIP-209ENST00000508017 TNNQ9UQP3 1299 aa17.28■□□□□ 0.36
SNCAIP-209ENST00000508017 RRP7AQ9Y3A4 280 aaKnown RBP17.28■□□□□ 0.36
SNCAIP-209ENST00000508017 ADGRF5Q8IZF2 1346 aa17.28■□□□□ 0.36
SNCAIP-209ENST00000508017 MAPK8IP3Q9UPT6 1336 aa17.27■□□□□ 0.36
SNCAIP-209ENST00000508017 SHPRHQ149N8 1683 aa17.27■□□□□ 0.36
SNCAIP-209ENST00000508017 MAP3K4Q9Y6R4 1608 aa17.27■□□□□ 0.35
SNCAIP-209ENST00000508017 SLKQ9H2G2 1235 aaPredicted RBP17.26■□□□□ 0.35
SNCAIP-209ENST00000508017 POGKQ9P215 609 aa17.26■□□□□ 0.35
SNCAIP-209ENST00000508017 NINLQ9Y2I6 1382 aa17.25■□□□□ 0.35
SNCAIP-209ENST00000508017 TNNT2P45379 298 aaPredicted RBP17.25■□□□□ 0.35
SNCAIP-209ENST00000508017 POLR3AO14802 1390 aaPredicted RBP17.25■□□□□ 0.35
SNCAIP-209ENST00000508017 RLBP1P12271 317 aa17.25■□□□□ 0.35
SNCAIP-209ENST00000508017 PCDHB15Q9Y5E8 787 aa17.25■□□□□ 0.35
SNCAIP-209ENST00000508017 NGEFQ8N5V2 710 aa17.24■□□□□ 0.35
SNCAIP-209ENST00000508017 RARSP54136 660 aaKnown RBP17.23■□□□□ 0.35
SNCAIP-209ENST00000508017 BCL2L13Q9BXK5 485 aa17.23■□□□□ 0.35
SNCAIP-209ENST00000508017 RTEL1-TNFRSF6BF6WH68 1400 aa17.23■□□□□ 0.35
SNCAIP-209ENST00000508017 VWDEQ8N2E2 1590 aa17.22■□□□□ 0.35
SNCAIP-209ENST00000508017 MYOM2P54296 1465 aa17.22■□□□□ 0.35
SNCAIP-209ENST00000508017 BECN1Q14457 450 aa17.21■□□□□ 0.35
SNCAIP-209ENST00000508017 MROH2AA6NES4 1674 aa17.21■□□□□ 0.35
SNCAIP-209ENST00000508017 NSD3Q9BZ95 1437 aa17.21■□□□□ 0.35
SNCAIP-209ENST00000508017 KIF3BO15066 747 aa17.21■□□□□ 0.35
SNCAIP-209ENST00000508017 IFT172Q9UG01 1749 aa17.21■□□□□ 0.35
SNCAIP-209ENST00000508017 KANK1Q14678 1352 aa17.21■□□□□ 0.34
SNCAIP-209ENST00000508017 TCP11L2Q8N4U5 519 aa17.2■□□□□ 0.34
SNCAIP-209ENST00000508017 IQSEC2Q5JU85 1478 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms