RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 E9PCH4 1651 aa33.16■■■□□ 2.9
SNCB-204ENST00000508006 ARHGAP23Q9P227 1491 aa33.15■■■□□ 2.9
SNCB-204ENST00000508006 TMEM2Q9UHN6 1383 aa33.09■■■□□ 2.89
SNCB-204ENST00000508006 PIK3C2BO00750 1634 aa33.09■■■□□ 2.89
SNCB-204ENST00000508006 IDI1Q13907 227 aa33.08■■■□□ 2.89
SNCB-204ENST00000508006 SLC4A1APQ9BWU0 796 aaKnown RBP33.08■■■□□ 2.89
SNCB-204ENST00000508006 PCGF6Q9BYE7 350 aa33.06■■■□□ 2.88
SNCB-204ENST00000508006 MPHOSPH9Q99550 1183 aa33.04■■■□□ 2.88
SNCB-204ENST00000508006 NOS1P29475 1434 aa33.03■■■□□ 2.88
SNCB-204ENST00000508006 BCANQ96GW7 911 aa33.03■■■□□ 2.88
SNCB-204ENST00000508006 SLC26A8Q96RN1 970 aa33.01■■■□□ 2.87
SNCB-204ENST00000508006 SPHKAPQ2M3C7 1700 aa33.01■■■□□ 2.87
SNCB-204ENST00000508006 KCNA6P17658 529 aa33■■■□□ 2.87
SNCB-204ENST00000508006 PROSER2Q86WR7 435 aaPredicted RBP32.99■■■□□ 2.87
SNCB-204ENST00000508006 XIRP1Q702N8 1843 aaKnown RBP32.98■■■□□ 2.87
SNCB-204ENST00000508006 TMEM94Q12767 1356 aa32.96■■■□□ 2.87
SNCB-204ENST00000508006 SLC52A1Q9NWF4 448 aa32.95■■■□□ 2.87
SNCB-204ENST00000508006 KDM5AP29375 1690 aaKnown RBP32.94■■■□□ 2.86
SNCB-204ENST00000508006 RBM33Q96EV2 1170 aaKnown RBP32.93■■■□□ 2.86
SNCB-204ENST00000508006 FAM135BQ49AJ0 1406 aa32.93■■■□□ 2.86
SNCB-204ENST00000508006 TRPM2O94759 1503 aa32.92■■■□□ 2.86
SNCB-204ENST00000508006 HDGFP51858 240 aaKnown RBP32.87■■■□□ 2.85
SNCB-204ENST00000508006 RGS17Q9UGC6 210 aaPredicted RBP32.86■■■□□ 2.85
SNCB-204ENST00000508006 ADGRB3O60242 1522 aa32.84■■■□□ 2.85
SNCB-204ENST00000508006 PPP1R15AO75807 674 aaPredicted RBP32.84■■■□□ 2.85
SNCB-204ENST00000508006 MSH6P52701 1360 aa32.81■■■□□ 2.84
SNCB-204ENST00000508006 FOXD1Q16676 465 aa32.79■■■□□ 2.84
SNCB-204ENST00000508006 ROBO1Q9Y6N7 1651 aa32.78■■■□□ 2.84
SNCB-204ENST00000508006 CLTCL1P53675 1640 aa32.78■■■□□ 2.84
SNCB-204ENST00000508006 CHGAP10645 457 aaKnown RBP32.78■■■□□ 2.84
SNCB-204ENST00000508006 KIF1BO60333 1816 aa32.77■■■□□ 2.84
SNCB-204ENST00000508006 SLAIN2Q9P270 581 aa32.77■■■□□ 2.84
SNCB-204ENST00000508006 NKTRP30414 1462 aaKnown RBP32.77■■■□□ 2.84
SNCB-204ENST00000508006 DHX57Q6P158 1386 aaKnown RBP32.76■■■□□ 2.83
SNCB-204ENST00000508006 ANKRD30BQ9BXX2 1392 aa32.75■■■□□ 2.83
SNCB-204ENST00000508006 TMEM131LA2VDJ0 1609 aa32.74■■■□□ 2.83
SNCB-204ENST00000508006 CCDC144AA2RUR9 1427 aa32.74■■■□□ 2.83
SNCB-204ENST00000508006 PLEKHG1Q9ULL1 1385 aa32.72■■■□□ 2.83
SNCB-204ENST00000508006 RIMS2Q9UQ26 1411 aa32.72■■■□□ 2.83
SNCB-204ENST00000508006 C14orf37Q86TY3 774 aa32.71■■■□□ 2.83
SNCB-204ENST00000508006 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.71■■■□□ 2.83
SNCB-204ENST00000508006 NWD1Q149M9 1564 aa32.7■■■□□ 2.83
SNCB-204ENST00000508006 POTEAQ6S8J7 498 aa32.7■■■□□ 2.83
SNCB-204ENST00000508006 MYO5BQ9ULV0 1848 aa32.7■■■□□ 2.82
SNCB-204ENST00000508006 ZFYVE9O95405 1425 aa32.68■■■□□ 2.82
SNCB-204ENST00000508006 TBX22Q9Y458 520 aa32.67■■■□□ 2.82
SNCB-204ENST00000508006 CHD2O14647 1828 aaKnown RBP32.65■■■□□ 2.82
SNCB-204ENST00000508006 NUTM2DQ5VT03 806 aaPredicted RBP32.65■■■□□ 2.82
SNCB-204ENST00000508006 PHLPP1O60346 1717 aa32.63■■■□□ 2.81
SNCB-204ENST00000508006 JCADQ9P266 1359 aa32.6■■■□□ 2.81
SNCB-204ENST00000508006 ATF3P18847 181 aa32.57■■■□□ 2.8
SNCB-204ENST00000508006 SPATA31E1Q6ZUB1 1445 aa32.56■■■□□ 2.8
SNCB-204ENST00000508006 NCOA3Q9Y6Q9 1424 aa32.56■■■□□ 2.8
SNCB-204ENST00000508006 CADPS2Q86UW7 1296 aa32.55■■■□□ 2.8
SNCB-204ENST00000508006 CLSPNQ9HAW4 1339 aa32.54■■■□□ 2.8
SNCB-204ENST00000508006 C19orf44Q9H6X5 657 aa32.54■■■□□ 2.8
SNCB-204ENST00000508006 RPGRIP1LQ68CZ1 1315 aa32.52■■■□□ 2.8
SNCB-204ENST00000508006 MEX3CQ5U5Q3 659 aaKnown RBP32.51■■■□□ 2.79
SNCB-204ENST00000508006 PIK3R4Q99570 1358 aa32.49■■■□□ 2.79
SNCB-204ENST00000508006 AMOTL2Q9Y2J4 779 aa32.49■■■□□ 2.79
SNCB-204ENST00000508006 ADAMTS13Q76LX8 1427 aa32.49■■■□□ 2.79
SNCB-204ENST00000508006 PPLO60437 1756 aa32.48■■■□□ 2.79
SNCB-204ENST00000508006 NEXMIFQ5QGS0 1516 aa32.48■■■□□ 2.79
SNCB-204ENST00000508006 ZNF326Q5BKZ1 582 aaKnown RBP32.48■■■□□ 2.79
SNCB-204ENST00000508006 IFT172Q9UG01 1749 aa32.47■■■□□ 2.79
SNCB-204ENST00000508006 SPATA31A6Q5VVP1 1343 aa32.46■■■□□ 2.79
SNCB-204ENST00000508006 DIP2AQ14689 1571 aa32.45■■■□□ 2.79
SNCB-204ENST00000508006 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.44■■■□□ 2.78
SNCB-204ENST00000508006 COL16A1Q07092 1604 aaPredicted RBP32.43■■■□□ 2.78
SNCB-204ENST00000508006 ZNF772Q68DY9 489 aaPredicted RBP32.4■■■□□ 2.78
SNCB-204ENST00000508006 STAC3Q96MF2 364 aa32.4■■■□□ 2.78
SNCB-204ENST00000508006 VGFO15240 615 aaPredicted RBP32.39■■■□□ 2.78
SNCB-204ENST00000508006 RGL3Q3MIN7 710 aa32.39■■■□□ 2.78
SNCB-204ENST00000508006 CCER1Q8TC90 406 aaPredicted RBP32.38■■■□□ 2.77
SNCB-204ENST00000508006 SIN3AQ96ST3 1273 aa32.37■■■□□ 2.77
SNCB-204ENST00000508006 BRINP3Q76B58 766 aa32.35■■■□□ 2.77
SNCB-204ENST00000508006 MYOM2P54296 1465 aa32.34■■■□□ 2.77
SNCB-204ENST00000508006 PTPRUQ92729 1446 aa32.34■■■□□ 2.77
SNCB-204ENST00000508006 NUTM2BA6NNL0 878 aaPredicted RBP32.33■■■□□ 2.77
SNCB-204ENST00000508006 NUTM2EB1AL46 878 aaPredicted RBP32.33■■■□□ 2.77
SNCB-204ENST00000508006 NUTM2AQ8IVF1 878 aaPredicted RBP32.33■■■□□ 2.77
SNCB-204ENST00000508006 SETD1AO15047 1707 aaKnown RBP32.33■■■□□ 2.77
SNCB-204ENST00000508006 AHDC1Q5TGY3 1603 aaPredicted RBP32.33■■■□□ 2.77
SNCB-204ENST00000508006 LRP6O75581 1613 aa32.32■■■□□ 2.76
SNCB-204ENST00000508006 NEUROD1Q13562 356 aa32.31■■■□□ 2.76
SNCB-204ENST00000508006 SETBP1Q9Y6X0 1596 aa32.31■■■□□ 2.76
SNCB-204ENST00000508006 SHPRHQ149N8 1683 aa32.27■■■□□ 2.76
SNCB-204ENST00000508006 NRXN1Q9ULB1 1477 aa32.26■■■□□ 2.75
SNCB-204ENST00000508006 DCCP43146 1447 aa32.26■■■□□ 2.75
SNCB-204ENST00000508006 RXRBP28702 533 aa32.25■■■□□ 2.75
SNCB-204ENST00000508006 DCAF11Q8TEB1 546 aa32.25■■■□□ 2.75
SNCB-204ENST00000508006 NRXN3Q9Y4C0 1643 aa32.25■■■□□ 2.75
SNCB-204ENST00000508006 LRRC59Q96AG4 307 aaKnown RBP32.23■■■□□ 2.75
SNCB-204ENST00000508006 TIMELESSQ9UNS1 1208 aa32.23■■■□□ 2.75
SNCB-204ENST00000508006 TONSLQ96HA7 1378 aa32.22■■■□□ 2.75
SNCB-204ENST00000508006 METP08581 1390 aa32.21■■■□□ 2.75
SNCB-204ENST00000508006 PIK3C2GO75747 1445 aa32.2■■■□□ 2.75
SNCB-204ENST00000508006 LAMC1P11047 1609 aa32.2■■■□□ 2.75
SNCB-204ENST00000508006 L3MBTL2Q969R5 705 aa32.2■■■□□ 2.75
SNCB-204ENST00000508006 ADGRF5Q8IZF2 1346 aa32.2■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms