RNA–Protein interactions for RNA: ENST00000507761.1

LINC01088-204, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 842 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-204ENST00000507761 OATP04181 439 aa10.2□□□□□ -0.78
LINC01088-204ENST00000507761 COPS2P61201 443 aa10.2□□□□□ -0.78
LINC01088-204ENST00000507761 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.19□□□□□ -0.78
LINC01088-204ENST00000507761 PPP1R18Q6NYC8 613 aa10.18□□□□□ -0.78
LINC01088-204ENST00000507761 PXYLP1Q8TE99 480 aa10.18□□□□□ -0.78
LINC01088-204ENST00000507761 PCDHB3Q9Y5E6 796 aa10.18□□□□□ -0.78
LINC01088-204ENST00000507761 GNPATO15228 680 aa10.17□□□□□ -0.78
LINC01088-204ENST00000507761 KMT5BQ4FZB7 885 aa10.16□□□□□ -0.78
LINC01088-204ENST00000507761 NKX2-3Q8TAU0 364 aa10.16□□□□□ -0.78
LINC01088-204ENST00000507761 ZPR1O75312 459 aa10.15□□□□□ -0.78
LINC01088-204ENST00000507761 METTL3Q86U44 580 aaKnown RBP10.15□□□□□ -0.78
LINC01088-204ENST00000507761 VSIG10Q8N0Z9 540 aa10.15□□□□□ -0.78
LINC01088-204ENST00000507761 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.15□□□□□ -0.78
LINC01088-204ENST00000507761 GPR37O15354 613 aa10.14□□□□□ -0.79
LINC01088-204ENST00000507761 ACTN4O43707 911 aaKnown RBP10.13□□□□□ -0.79
LINC01088-204ENST00000507761 CFHP08603 1231 aa10.13□□□□□ -0.79
LINC01088-204ENST00000507761 FECHP22830 423 aa10.13□□□□□ -0.79
LINC01088-204ENST00000507761 GGCXP38435 758 aa10.13□□□□□ -0.79
LINC01088-204ENST00000507761 BLOC1S3Q6QNY0 202 aa10.13□□□□□ -0.79
LINC01088-204ENST00000507761 SLC10A3P09131 477 aa10.12□□□□□ -0.79
LINC01088-204ENST00000507761 PRKD2Q9BZL6 878 aa10.12□□□□□ -0.79
LINC01088-204ENST00000507761 RSPH4AQ5TD94 716 aa10.11□□□□□ -0.79
LINC01088-204ENST00000507761 GPIHBP1Q8IV16 184 aa10.11□□□□□ -0.79
LINC01088-204ENST00000507761 TMUB1Q9BVT8 246 aa10.1□□□□□ -0.79
LINC01088-204ENST00000507761 V9GY48 417 aaPredicted RBP10.09□□□□□ -0.79
LINC01088-204ENST00000507761 LAPTM4AQ15012 233 aa10.07□□□□□ -0.8
LINC01088-204ENST00000507761 DAXXQ9UER7 740 aaPredicted RBP10.07□□□□□ -0.8
LINC01088-204ENST00000507761 TULP1O00294 542 aaPredicted RBP10.06□□□□□ -0.8
LINC01088-204ENST00000507761 NR1I2O75469 434 aa10.05□□□□□ -0.8
LINC01088-204ENST00000507761 TLL1O43897 1013 aa10.04□□□□□ -0.8
LINC01088-204ENST00000507761 Q6ZNB5 142 aa10.04□□□□□ -0.8
LINC01088-204ENST00000507761 GFRA3O60609 400 aa10.03□□□□□ -0.8
LINC01088-204ENST00000507761 RDH13Q8NBN7 331 aa10.03□□□□□ -0.8
LINC01088-204ENST00000507761 RNF223E7ERA6 249 aa10.02□□□□□ -0.81
LINC01088-204ENST00000507761 NLRP7Q8WX94 980 aa10.02□□□□□ -0.81
LINC01088-204ENST00000507761 DDX11L8A8MPP1 907 aa10.01□□□□□ -0.81
LINC01088-204ENST00000507761 ADH1BP00325 375 aa10.01□□□□□ -0.81
LINC01088-204ENST00000507761 SULF1Q8IWU6 871 aa10.01□□□□□ -0.81
LINC01088-204ENST00000507761 PHOX2BQ99453 314 aa10.01□□□□□ -0.81
LINC01088-204ENST00000507761 PUS10Q3MIT2 529 aaKnown RBP10□□□□□ -0.81
LINC01088-204ENST00000507761 SCUBE3Q8IX30 993 aa10□□□□□ -0.81
LINC01088-204ENST00000507761 S1PR4O95977 384 aa9.99□□□□□ -0.81
LINC01088-204ENST00000507761 MAP2K5Q13163 448 aa9.98□□□□□ -0.81
LINC01088-204ENST00000507761 ANKLE1Q8NAG6 615 aa9.98□□□□□ -0.81
LINC01088-204ENST00000507761 NRG2O14511 850 aaPredicted RBP9.97□□□□□ -0.81
LINC01088-204ENST00000507761 SLC6A16Q9GZN6 736 aa9.97□□□□□ -0.81
LINC01088-204ENST00000507761 SLC19A1P41440 591 aa9.96□□□□□ -0.82
LINC01088-204ENST00000507761 GCGRP47871 477 aa9.96□□□□□ -0.82
LINC01088-204ENST00000507761 FUT2Q10981 343 aa9.96□□□□□ -0.82
LINC01088-204ENST00000507761 PPEF1O14829 653 aaPredicted RBP9.95□□□□□ -0.82
LINC01088-204ENST00000507761 ATP6V1AP38606 617 aa9.95□□□□□ -0.82
LINC01088-204ENST00000507761 MORN1Q5T089 497 aa9.95□□□□□ -0.82
LINC01088-204ENST00000507761 SPSB2Q99619 263 aa9.95□□□□□ -0.82
LINC01088-204ENST00000507761 PDZRN3Q9UPQ7 1066 aa9.95□□□□□ -0.82
LINC01088-204ENST00000507761 IRF6O14896 467 aa9.94□□□□□ -0.82
LINC01088-204ENST00000507761 MINK1Q8N4C8 1332 aaPredicted RBP9.93□□□□□ -0.82
LINC01088-204ENST00000507761 EMID1Q96A84 441 aaPredicted RBP9.93□□□□□ -0.82
LINC01088-204ENST00000507761 SPRYD7Q5W111 196 aa9.91□□□□□ -0.82
LINC01088-204ENST00000507761 TRAF7Q6Q0C0 670 aa9.91□□□□□ -0.82
LINC01088-204ENST00000507761 GRIPAP1Q4V328 841 aa9.9□□□□□ -0.82
LINC01088-204ENST00000507761 LIAT1Q6ZQX7 453 aa9.9□□□□□ -0.82
LINC01088-204ENST00000507761 SLC27A5Q9Y2P5 690 aa9.9□□□□□ -0.82
LINC01088-204ENST00000507761 FMNL1O95466 1100 aaPredicted RBP9.89□□□□□ -0.83
LINC01088-204ENST00000507761 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.89□□□□□ -0.83
LINC01088-204ENST00000507761 ZNF598Q86UK7 904 aaKnown RBP9.89□□□□□ -0.83
LINC01088-204ENST00000507761 THAP11Q96EK4 314 aa9.89□□□□□ -0.83
LINC01088-204ENST00000507761 LCE2BO14633 110 aa9.88□□□□□ -0.83
LINC01088-204ENST00000507761 CD46P15529 392 aa9.88□□□□□ -0.83
LINC01088-204ENST00000507761 SALL2Q9Y467 1007 aaPredicted RBP9.88□□□□□ -0.83
LINC01088-204ENST00000507761 MDM2Q00987 491 aaPredicted RBP9.87□□□□□ -0.83
LINC01088-204ENST00000507761 CCDC102AQ96A19 550 aa9.87□□□□□ -0.83
LINC01088-204ENST00000507761 PLA2G2CQ5R387 149 aa9.86□□□□□ -0.83
LINC01088-204ENST00000507761 TRIM67Q6ZTA4 783 aa9.86□□□□□ -0.83
LINC01088-204ENST00000507761 ZNF697Q5TEC3 545 aa9.85□□□□□ -0.83
LINC01088-204ENST00000507761 BRICD5Q6PL45 260 aa9.85□□□□□ -0.83
LINC01088-204ENST00000507761 FAM160A2Q8N612 972 aaPredicted RBP9.85□□□□□ -0.83
LINC01088-204ENST00000507761 PRR20EP86478 221 aa9.84□□□□□ -0.83
LINC01088-204ENST00000507761 PRR20CP86479 221 aa9.84□□□□□ -0.83
LINC01088-204ENST00000507761 PRR20DP86480 221 aa9.84□□□□□ -0.83
LINC01088-204ENST00000507761 PRR20BP86481 221 aa9.84□□□□□ -0.83
LINC01088-204ENST00000507761 PRR20AP86496 221 aa9.84□□□□□ -0.83
LINC01088-204ENST00000507761 KDM4AO75164 1064 aa9.83□□□□□ -0.84
LINC01088-204ENST00000507761 Q3C1V9 767 aa9.83□□□□□ -0.84
LINC01088-204ENST00000507761 LMOD2Q6P5Q4 547 aa9.83□□□□□ -0.84
LINC01088-204ENST00000507761 CLCN1P35523 988 aa9.82□□□□□ -0.84
LINC01088-204ENST00000507761 MSS51Q4VC12 460 aa9.82□□□□□ -0.84
LINC01088-204ENST00000507761 GPCPD1Q9NPB8 672 aa9.82□□□□□ -0.84
LINC01088-204ENST00000507761 FCF1Q9Y324 198 aaKnown RBP9.82□□□□□ -0.84
LINC01088-204ENST00000507761 USP46P62068 366 aa9.81□□□□□ -0.84
LINC01088-204ENST00000507761 RNF19BQ6ZMZ0 732 aa9.81□□□□□ -0.84
LINC01088-204ENST00000507761 GDF9O60383 454 aa9.8□□□□□ -0.84
LINC01088-204ENST00000507761 RPIAP49247 311 aa9.8□□□□□ -0.84
LINC01088-204ENST00000507761 KRI1Q8N9T8 703 aaKnown RBP9.8□□□□□ -0.84
LINC01088-204ENST00000507761 PRDM9Q9NQV7 894 aa9.8□□□□□ -0.84
LINC01088-204ENST00000507761 TNFRSF10AO00220 468 aa9.78□□□□□ -0.84
LINC01088-204ENST00000507761 PKDCCQ504Y2 493 aa9.78□□□□□ -0.84
LINC01088-204ENST00000507761 FAM217BQ9NTX9 383 aaPredicted RBP9.78□□□□□ -0.84
LINC01088-204ENST00000507761 DGAT1O75907 488 aa9.77□□□□□ -0.85
LINC01088-204ENST00000507761 CD2BP2O95400 341 aaKnown RBP9.77□□□□□ -0.85
LINC01088-204ENST00000507761 HOXA2O43364 376 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms