RNA–Protein interactions for RNA: ENST00000507367.1

SMAD1-206, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-206ENST00000507367 PTPRMP28827 1452 aa10.87□□□□□ -0.67
SMAD1-206ENST00000507367 IFT172Q9UG01 1749 aa10.87□□□□□ -0.67
SMAD1-206ENST00000507367 ZFYVE9O95405 1425 aa10.86□□□□□ -0.67
SMAD1-206ENST00000507367 PPLO60437 1756 aa10.86□□□□□ -0.67
SMAD1-206ENST00000507367 EIF4G2P78344 907 aaKnown RBP eCLIP10.86□□□□□ -0.67
SMAD1-206ENST00000507367 THEMISQ8N1K5 641 aaPredicted RBP10.86□□□□□ -0.67
SMAD1-206ENST00000507367 NEXMIFQ5QGS0 1516 aa10.85□□□□□ -0.67
SMAD1-206ENST00000507367 MYO3AQ8NEV4 1616 aa10.85□□□□□ -0.67
SMAD1-206ENST00000507367 ZNF316A6NFI3 1004 aaPredicted RBP10.85□□□□□ -0.67
SMAD1-206ENST00000507367 CARD11Q9BXL7 1154 aa10.85□□□□□ -0.67
SMAD1-206ENST00000507367 EID1Q9Y6B2 187 aa10.85□□□□□ -0.67
SMAD1-206ENST00000507367 RIMS2Q9UQ26 1411 aa10.84□□□□□ -0.67
SMAD1-206ENST00000507367 NRXN1Q9ULB1 1477 aa10.84□□□□□ -0.67
SMAD1-206ENST00000507367 UBR1Q8IWV7 1749 aa10.84□□□□□ -0.67
SMAD1-206ENST00000507367 KIAA1210Q9ULL0 1709 aa10.84□□□□□ -0.67
SMAD1-206ENST00000507367 TRPM1Q7Z4N2 1603 aa10.84□□□□□ -0.67
SMAD1-206ENST00000507367 SETD1BQ9UPS6 1966 aaKnown RBP10.83□□□□□ -0.68
SMAD1-206ENST00000507367 CEP170BQ9Y4F5 1589 aaPredicted RBP10.83□□□□□ -0.68
SMAD1-206ENST00000507367 TMEM2Q9UHN6 1383 aa10.83□□□□□ -0.68
SMAD1-206ENST00000507367 MYO5BQ9ULV0 1848 aa10.83□□□□□ -0.68
SMAD1-206ENST00000507367 LAMC1P11047 1609 aa10.83□□□□□ -0.68
SMAD1-206ENST00000507367 PIK3C2GO75747 1445 aa10.83□□□□□ -0.68
SMAD1-206ENST00000507367 ADGRF5Q8IZF2 1346 aa10.83□□□□□ -0.68
SMAD1-206ENST00000507367 EIF3AQ14152 1382 aaKnown RBP10.82□□□□□ -0.68
SMAD1-206ENST00000507367 GPRASP1Q5JY77 1395 aa10.81□□□□□ -0.68
SMAD1-206ENST00000507367 USP47Q96K76 1375 aa10.81□□□□□ -0.68
SMAD1-206ENST00000507367 BCANQ96GW7 911 aa10.81□□□□□ -0.68
SMAD1-206ENST00000507367 ZNF142P52746 1687 aaPredicted RBP10.8□□□□□ -0.68
SMAD1-206ENST00000507367 SLC24A1O60721 1099 aa10.8□□□□□ -0.68
SMAD1-206ENST00000507367 NUTM2DQ5VT03 806 aaPredicted RBP10.8□□□□□ -0.68
SMAD1-206ENST00000507367 C14orf93Q9H972 538 aaKnown RBP10.8□□□□□ -0.68
SMAD1-206ENST00000507367 SLIT1O75093 1534 aa10.79□□□□□ -0.68
SMAD1-206ENST00000507367 SETBP1Q9Y6X0 1596 aa10.79□□□□□ -0.68
SMAD1-206ENST00000507367 HSPA5P11021 654 aaKnown RBP10.79□□□□□ -0.68
SMAD1-206ENST00000507367 TXNDC2Q86VQ3 553 aa10.79□□□□□ -0.68
SMAD1-206ENST00000507367 NBPF1Q3BBV0 1214 aa10.78□□□□□ -0.68
SMAD1-206ENST00000507367 CFAP70Q5T0N1 1121 aa10.78□□□□□ -0.68
SMAD1-206ENST00000507367 SCAF11Q99590 1463 aaKnown RBP10.78□□□□□ -0.68
SMAD1-206ENST00000507367 ARHGAP23Q9P227 1491 aa10.77□□□□□ -0.69
SMAD1-206ENST00000507367 KDM4FA0A1W2PPD8 638 aa10.77□□□□□ -0.69
SMAD1-206ENST00000507367 ANKLE2Q86XL3 938 aa10.77□□□□□ -0.69
SMAD1-206ENST00000507367 PLEKHG1Q9ULL1 1385 aa10.77□□□□□ -0.69
SMAD1-206ENST00000507367 ALKQ9UM73 1620 aa10.74□□□□□ -0.69
SMAD1-206ENST00000507367 IQGAP1P46940 1657 aa10.73□□□□□ -0.69
SMAD1-206ENST00000507367 ST20-MTHFSA0A0A6YYL1 179 aa10.73□□□□□ -0.69
SMAD1-206ENST00000507367 CDCA8Q53HL2 280 aa10.73□□□□□ -0.69
SMAD1-206ENST00000507367 HIRIP3Q9BW71 556 aaPredicted RBP10.73□□□□□ -0.69
SMAD1-206ENST00000507367 ADGRB1O14514 1584 aa10.73□□□□□ -0.69
SMAD1-206ENST00000507367 DIP2AQ14689 1571 aa10.73□□□□□ -0.69
SMAD1-206ENST00000507367 LTKP29376 864 aa10.72□□□□□ -0.69
SMAD1-206ENST00000507367 TMF1P82094 1093 aa10.72□□□□□ -0.69
SMAD1-206ENST00000507367 TMEM132EQ6IEE7 984 aa10.72□□□□□ -0.69
SMAD1-206ENST00000507367 SENP3Q9H4L4 574 aaPredicted RBP10.71□□□□□ -0.69
SMAD1-206ENST00000507367 YTHDC2Q9H6S0 1430 aaKnown RBP10.71□□□□□ -0.69
SMAD1-206ENST00000507367 CENPJQ9HC77 1338 aaPredicted RBP10.71□□□□□ -0.69
SMAD1-206ENST00000507367 TRAK1Q9UPV9 953 aa10.71□□□□□ -0.69
SMAD1-206ENST00000507367 TBX22Q9Y458 520 aa10.71□□□□□ -0.69
SMAD1-206ENST00000507367 LRPPRCP42704 1394 aaKnown RBP10.7□□□□□ -0.7
SMAD1-206ENST00000507367 POGKQ9P215 609 aa10.7□□□□□ -0.7
SMAD1-206ENST00000507367 STK26Q9P289 416 aa10.7□□□□□ -0.7
SMAD1-206ENST00000507367 NRXN3Q9Y4C0 1643 aa10.69□□□□□ -0.7
SMAD1-206ENST00000507367 PIK3R4Q99570 1358 aa10.69□□□□□ -0.7
SMAD1-206ENST00000507367 POLR1AO95602 1720 aaPredicted RBP10.69□□□□□ -0.7
SMAD1-206ENST00000507367 NPHP4O75161 1426 aaPredicted RBP10.68□□□□□ -0.7
SMAD1-206ENST00000507367 ADAMTS13Q76LX8 1427 aa10.68□□□□□ -0.7
SMAD1-206ENST00000507367 ABCC11Q96J66 1382 aa10.68□□□□□ -0.7
SMAD1-206ENST00000507367 SBNO2Q9Y2G9 1366 aa10.68□□□□□ -0.7
SMAD1-206ENST00000507367 DIEXFQ68CQ4 756 aaKnown RBP10.68□□□□□ -0.7
SMAD1-206ENST00000507367 SLC26A8Q96RN1 970 aa10.68□□□□□ -0.7
SMAD1-206ENST00000507367 DLC1Q96QB1 1528 aa10.68□□□□□ -0.7
SMAD1-206ENST00000507367 MED14O60244 1454 aa10.68□□□□□ -0.7
SMAD1-206ENST00000507367 SETD1AO15047 1707 aaKnown RBP10.67□□□□□ -0.7
SMAD1-206ENST00000507367 METP08581 1390 aa10.67□□□□□ -0.7
SMAD1-206ENST00000507367 CCDC7Q96M83 1385 aa10.67□□□□□ -0.7
SMAD1-206ENST00000507367 SIRT1Q96EB6 747 aa10.67□□□□□ -0.7
SMAD1-206ENST00000507367 POLR3GLQ9BT43 218 aa10.67□□□□□ -0.7
SMAD1-206ENST00000507367 ASXL1Q8IXJ9 1541 aa10.67□□□□□ -0.7
SMAD1-206ENST00000507367 WASHC2AQ641Q2 1341 aa10.66□□□□□ -0.7
SMAD1-206ENST00000507367 PRAM1Q96QH2 718 aa10.66□□□□□ -0.7
SMAD1-206ENST00000507367 TESK2Q96S53 571 aa10.66□□□□□ -0.7
SMAD1-206ENST00000507367 ARHGEF28Q8N1W1 1705 aaKnown RBP10.66□□□□□ -0.7
SMAD1-206ENST00000507367 TECPR2O15040 1411 aa10.66□□□□□ -0.7
SMAD1-206ENST00000507367 FAM135BQ49AJ0 1406 aa10.66□□□□□ -0.7
SMAD1-206ENST00000507367 KIF7Q2M1P5 1343 aa10.65□□□□□ -0.7
SMAD1-206ENST00000507367 EVC2Q86UK5 1308 aa10.65□□□□□ -0.7
SMAD1-206ENST00000507367 KNDC1Q76NI1 1749 aa10.65□□□□□ -0.7
SMAD1-206ENST00000507367 LMTK3Q96Q04 1460 aa10.65□□□□□ -0.7
SMAD1-206ENST00000507367 QRICH2Q9H0J4 1663 aa10.65□□□□□ -0.7
SMAD1-206ENST00000507367 NCKAP5LQ9HCH0 1330 aa10.64□□□□□ -0.71
SMAD1-206ENST00000507367 DDX10Q13206 875 aaKnown RBP10.64□□□□□ -0.71
SMAD1-206ENST00000507367 CPS1P31327 1500 aa10.63□□□□□ -0.71
SMAD1-206ENST00000507367 AMOTL2Q9Y2J4 779 aa10.63□□□□□ -0.71
SMAD1-206ENST00000507367 PTCH1Q13635 1447 aa10.63□□□□□ -0.71
SMAD1-206ENST00000507367 HSPA2P54652 639 aa10.62□□□□□ -0.71
SMAD1-206ENST00000507367 SAFB2Q14151 953 aaKnown RBP eCLIP10.62□□□□□ -0.71
SMAD1-206ENST00000507367 PUS7Q96PZ0 661 aaKnown RBP10.62□□□□□ -0.71
SMAD1-206ENST00000507367 DMRT2Q9Y5R5 561 aa10.62□□□□□ -0.71
SMAD1-206ENST00000507367 DISP3Q9P2K9 1392 aa10.62□□□□□ -0.71
SMAD1-206ENST00000507367 C11orf95C9JLR9 678 aaPredicted RBP10.61□□□□□ -0.71
SMAD1-206ENST00000507367 SRPK2P78362 688 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms