RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 UACAQ9BZF9 1416 aa11.75□□□□□ -0.53
NR1I3-224ENST00000507215 IQGAP2Q13576 1575 aa11.75□□□□□ -0.53
NR1I3-224ENST00000507215 PPRC1Q5VV67 1664 aaKnown RBP11.75□□□□□ -0.53
NR1I3-224ENST00000507215 EN1Q05925 392 aaPredicted RBP11.74□□□□□ -0.53
NR1I3-224ENST00000507215 TSR1Q2NL82 804 aaKnown RBP11.74□□□□□ -0.53
NR1I3-224ENST00000507215 PPP4R3BQ5MIZ7 849 aa11.74□□□□□ -0.53
NR1I3-224ENST00000507215 CARMIL1Q5VZK9 1371 aa11.74□□□□□ -0.53
NR1I3-224ENST00000507215 KDM5BQ9UGL1 1544 aa11.73□□□□□ -0.53
NR1I3-224ENST00000507215 MAP3K4Q9Y6R4 1608 aa11.72□□□□□ -0.53
NR1I3-224ENST00000507215 PSDA5PKW4 1024 aaPredicted RBP11.72□□□□□ -0.53
NR1I3-224ENST00000507215 SMYD5Q6GMV2 418 aa11.72□□□□□ -0.53
NR1I3-224ENST00000507215 LMOD2Q6P5Q4 547 aa11.72□□□□□ -0.53
NR1I3-224ENST00000507215 POTEGQ6S5H5 508 aa11.72□□□□□ -0.53
NR1I3-224ENST00000507215 CDHR5Q9HBB8 845 aa11.72□□□□□ -0.53
NR1I3-224ENST00000507215 EPRSP07814 1512 aaKnown RBP11.71□□□□□ -0.53
NR1I3-224ENST00000507215 POTEMA6NI47 508 aa11.71□□□□□ -0.53
NR1I3-224ENST00000507215 FBXW7Q969H0 707 aa11.71□□□□□ -0.53
NR1I3-224ENST00000507215 C6orf132Q5T0Z8 1188 aa11.7□□□□□ -0.54
NR1I3-224ENST00000507215 ZNF687Q8N1G0 1237 aa11.7□□□□□ -0.54
NR1I3-224ENST00000507215 BCL2L12Q9HB09 334 aa11.7□□□□□ -0.54
NR1I3-224ENST00000507215 AXIN2Q9Y2T1 843 aa11.7□□□□□ -0.54
NR1I3-224ENST00000507215 HECW2Q9P2P5 1572 aa11.7□□□□□ -0.54
NR1I3-224ENST00000507215 MAP3K7O43318 606 aa11.69□□□□□ -0.54
NR1I3-224ENST00000507215 NPDC1Q9NQX5 325 aaPredicted RBP11.68□□□□□ -0.54
NR1I3-224ENST00000507215 UGGT2Q9NYU1 1516 aa11.67□□□□□ -0.54
NR1I3-224ENST00000507215 GPR37O15354 613 aa11.67□□□□□ -0.54
NR1I3-224ENST00000507215 COL9A1P20849 921 aa11.67□□□□□ -0.54
NR1I3-224ENST00000507215 PSEN2P49810 448 aa11.67□□□□□ -0.54
NR1I3-224ENST00000507215 DISP1Q96F81 1524 aa11.66□□□□□ -0.54
NR1I3-224ENST00000507215 COL17A1Q9UMD9 1497 aaPredicted RBP11.65□□□□□ -0.54
NR1I3-224ENST00000507215 WDR7Q9Y4E6 1490 aa11.65□□□□□ -0.54
NR1I3-224ENST00000507215 ZCCHC11Q5TAX3 1644 aaKnown RBP11.65□□□□□ -0.54
NR1I3-224ENST00000507215 MAGI3Q5TCQ9 1506 aa11.65□□□□□ -0.55
NR1I3-224ENST00000507215 TTBK1Q5TCY1 1321 aaPredicted RBP11.64□□□□□ -0.55
NR1I3-224ENST00000507215 NUTM2FA1L443 756 aa11.64□□□□□ -0.55
NR1I3-224ENST00000507215 KCNK17Q96T54 332 aa11.64□□□□□ -0.55
NR1I3-224ENST00000507215 TULP1O00294 542 aaPredicted RBP11.63□□□□□ -0.55
NR1I3-224ENST00000507215 DMRTA1Q5VZB9 504 aa11.63□□□□□ -0.55
NR1I3-224ENST00000507215 CFAP43Q8NDM7 1665 aa11.62□□□□□ -0.55
NR1I3-224ENST00000507215 KIAA0556O60303 1618 aa11.62□□□□□ -0.55
NR1I3-224ENST00000507215 RAPGEF2Q9Y4G8 1499 aa11.62□□□□□ -0.55
NR1I3-224ENST00000507215 ARHGAP33O14559 1287 aa11.61□□□□□ -0.55
NR1I3-224ENST00000507215 PTPREP23469 700 aa11.61□□□□□ -0.55
NR1I3-224ENST00000507215 PTGDRQ13258 359 aa11.61□□□□□ -0.55
NR1I3-224ENST00000507215 GPIHBP1Q8IV16 184 aa11.61□□□□□ -0.55
NR1I3-224ENST00000507215 FAM9AQ8IZU1 332 aaPredicted RBP11.61□□□□□ -0.55
NR1I3-224ENST00000507215 KRTAP3-3Q9BYR6 98 aa11.61□□□□□ -0.55
NR1I3-224ENST00000507215 KRTAP3-2Q9BYR7 98 aa11.61□□□□□ -0.55
NR1I3-224ENST00000507215 GOLGA3Q08378 1498 aa11.61□□□□□ -0.55
NR1I3-224ENST00000507215 CD109Q6YHK3 1445 aa11.6□□□□□ -0.55
NR1I3-224ENST00000507215 PHLDB1Q86UU1 1377 aa11.6□□□□□ -0.55
NR1I3-224ENST00000507215 FBXO41Q8TF61 875 aa11.6□□□□□ -0.55
NR1I3-224ENST00000507215 ZC3H15Q8WU90 426 aaKnown RBP11.6□□□□□ -0.55
NR1I3-224ENST00000507215 FECHP22830 423 aa11.58□□□□□ -0.56
NR1I3-224ENST00000507215 PBX2P40425 430 aa11.58□□□□□ -0.56
NR1I3-224ENST00000507215 CDAN1Q8IWY9 1227 aa11.58□□□□□ -0.56
NR1I3-224ENST00000507215 PPP1R3GB7ZBB8 358 aa11.57□□□□□ -0.56
NR1I3-224ENST00000507215 FAM198AQ9UFP1 575 aa11.57□□□□□ -0.56
NR1I3-224ENST00000507215 ARAP3Q8WWN8 1544 aa11.56□□□□□ -0.56
NR1I3-224ENST00000507215 PROX2Q3B8N5 592 aa11.56□□□□□ -0.56
NR1I3-224ENST00000507215 ZBED2Q9BTP6 218 aa11.56□□□□□ -0.56
NR1I3-224ENST00000507215 FCHSD2O94868 740 aa11.55□□□□□ -0.56
NR1I3-224ENST00000507215 C3orf80F5H4A9 247 aa11.54□□□□□ -0.56
NR1I3-224ENST00000507215 ABCA8O94911 1581 aa11.54□□□□□ -0.56
NR1I3-224ENST00000507215 PRKCSHP14314 528 aaPredicted RBP11.53□□□□□ -0.56
NR1I3-224ENST00000507215 LSM11P83369 360 aaKnown RBP eCLIP11.53□□□□□ -0.56
NR1I3-224ENST00000507215 CTTNBP2Q8WZ74 1663 aa11.52□□□□□ -0.56
NR1I3-224ENST00000507215 ZMYND10O75800 440 aa11.52□□□□□ -0.57
NR1I3-224ENST00000507215 PRSS12P56730 875 aa11.52□□□□□ -0.57
NR1I3-224ENST00000507215 PADI6Q6TGC4 694 aa11.52□□□□□ -0.57
NR1I3-224ENST00000507215 TTC13Q8NBP0 860 aa11.52□□□□□ -0.57
NR1I3-224ENST00000507215 CDCA7LQ96GN5 454 aa11.52□□□□□ -0.57
NR1I3-224ENST00000507215 TSKSQ9UJT2 592 aa11.52□□□□□ -0.57
NR1I3-224ENST00000507215 GNPATO15228 680 aa11.51□□□□□ -0.57
NR1I3-224ENST00000507215 HIC1Q14526 733 aa11.51□□□□□ -0.57
NR1I3-224ENST00000507215 TPRNQ4KMQ1 711 aa11.51□□□□□ -0.57
NR1I3-224ENST00000507215 KIF21BO75037 1637 aa11.5□□□□□ -0.57
NR1I3-224ENST00000507215 CERKQ8TCT0 537 aa11.5□□□□□ -0.57
NR1I3-224ENST00000507215 VPS9D1Q9Y2B5 631 aa11.5□□□□□ -0.57
NR1I3-224ENST00000507215 KCNH8Q96L42 1107 aa11.49□□□□□ -0.57
NR1I3-224ENST00000507215 SLC4A5Q9BY07 1137 aa11.49□□□□□ -0.57
NR1I3-224ENST00000507215 PTPRMP28827 1452 aa11.49□□□□□ -0.57
NR1I3-224ENST00000507215 TRIM6-TRIM34B2RNG4 842 aa11.48□□□□□ -0.57
NR1I3-224ENST00000507215 FAM161AQ3B820 660 aa11.48□□□□□ -0.57
NR1I3-224ENST00000507215 BARGINQ6ZT62 677 aa11.48□□□□□ -0.57
NR1I3-224ENST00000507215 ANKRD13DQ6ZTN6 518 aa11.48□□□□□ -0.57
NR1I3-224ENST00000507215 NEO1Q92859 1461 aa11.48□□□□□ -0.57
NR1I3-224ENST00000507215 ADAMTSL3P82987 1691 aa11.48□□□□□ -0.57
NR1I3-224ENST00000507215 ABCA9Q8IUA7 1624 aa11.47□□□□□ -0.57
NR1I3-224ENST00000507215 ADGRD1Q6QNK2 874 aa11.46□□□□□ -0.57
NR1I3-224ENST00000507215 KIAA1468Q9P260 1216 aa11.46□□□□□ -0.57
NR1I3-224ENST00000507215 PCF11O94913 1555 aaKnown RBP11.45□□□□□ -0.58
NR1I3-224ENST00000507215 RBM27Q9P2N5 1060 aaKnown RBP11.45□□□□□ -0.58
NR1I3-224ENST00000507215 TK2O00142 265 aa11.44□□□□□ -0.58
NR1I3-224ENST00000507215 HRO43593 1189 aa11.44□□□□□ -0.58
NR1I3-224ENST00000507215 BHMG1C9JSJ3 638 aaPredicted RBP11.43□□□□□ -0.58
NR1I3-224ENST00000507215 SMAPO00193 183 aa11.43□□□□□ -0.58
NR1I3-224ENST00000507215 BCORL1Q5H9F3 1711 aa11.43□□□□□ -0.58
NR1I3-224ENST00000507215 ONECUT3O60422 494 aaPredicted RBP11.42□□□□□ -0.58
NR1I3-224ENST00000507215 ADGRG1Q9Y653 693 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms