RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 ABCC3O15438 1527 aa11.73□□□□□ -0.53
VCAN-207ENST00000507162 IDI1Q13907 227 aa11.73□□□□□ -0.53
VCAN-207ENST00000507162 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.73□□□□□ -0.53
VCAN-207ENST00000507162 BRINP3Q76B58 766 aa11.72□□□□□ -0.53
VCAN-207ENST00000507162 LRRC59Q96AG4 307 aaKnown RBP11.72□□□□□ -0.53
VCAN-207ENST00000507162 C19orf44Q9H6X5 657 aa11.72□□□□□ -0.53
VCAN-207ENST00000507162 CCDC141Q6ZP82 1450 aa11.71□□□□□ -0.53
VCAN-207ENST00000507162 USP21Q9UK80 565 aa11.71□□□□□ -0.53
VCAN-207ENST00000507162 TIAM1Q13009 1591 aa11.71□□□□□ -0.54
VCAN-207ENST00000507162 NKTRP30414 1462 aaKnown RBP11.7□□□□□ -0.54
VCAN-207ENST00000507162 PPP1R15AO75807 674 aaPredicted RBP11.69□□□□□ -0.54
VCAN-207ENST00000507162 TRPC5Q9UL62 973 aaPredicted RBP11.69□□□□□ -0.54
VCAN-207ENST00000507162 FYCO1Q9BQS8 1478 aa11.69□□□□□ -0.54
VCAN-207ENST00000507162 SHPRHQ149N8 1683 aa11.68□□□□□ -0.54
VCAN-207ENST00000507162 DEFB132Q7Z7B7 95 aa11.68□□□□□ -0.54
VCAN-207ENST00000507162 DDX17Q92841 729 aaKnown RBP11.68□□□□□ -0.54
VCAN-207ENST00000507162 TET3O43151 1660 aa11.68□□□□□ -0.54
VCAN-207ENST00000507162 EP400Q96L91 3159 aa11.67□□□□□ -0.54
VCAN-207ENST00000507162 PSDA5PKW4 1024 aaPredicted RBP11.66□□□□□ -0.54
VCAN-207ENST00000507162 YY1P25490 414 aa11.66□□□□□ -0.54
VCAN-207ENST00000507162 AHDC1Q5TGY3 1603 aaPredicted RBP11.66□□□□□ -0.54
VCAN-207ENST00000507162 HDGFP51858 240 aaKnown RBP11.65□□□□□ -0.54
VCAN-207ENST00000507162 SF3B2Q13435 895 aaKnown RBP11.65□□□□□ -0.54
VCAN-207ENST00000507162 PIK3C2BO00750 1634 aa11.64□□□□□ -0.55
VCAN-207ENST00000507162 NCOA3Q9Y6Q9 1424 aa11.64□□□□□ -0.55
VCAN-207ENST00000507162 TBX22Q9Y458 520 aa11.64□□□□□ -0.55
VCAN-207ENST00000507162 KDM5AP29375 1690 aaKnown RBP11.64□□□□□ -0.55
VCAN-207ENST00000507162 EFCAB6Q5THR3 1501 aa11.64□□□□□ -0.55
VCAN-207ENST00000507162 SETD5Q9C0A6 1442 aa11.63□□□□□ -0.55
VCAN-207ENST00000507162 CAMSAP2Q08AD1 1489 aa11.63□□□□□ -0.55
VCAN-207ENST00000507162 NWD1Q149M9 1564 aa11.62□□□□□ -0.55
VCAN-207ENST00000507162 ARHGAP31Q2M1Z3 1444 aa11.62□□□□□ -0.55
VCAN-207ENST00000507162 CEP152O94986 1710 aa11.62□□□□□ -0.55
VCAN-207ENST00000507162 PNPLA6Q8IY17 1366 aa11.62□□□□□ -0.55
VCAN-207ENST00000507162 DIP2AQ14689 1571 aa11.62□□□□□ -0.55
VCAN-207ENST00000507162 HRCP23327 699 aa11.61□□□□□ -0.55
VCAN-207ENST00000507162 IFFO2Q5TF58 517 aa11.61□□□□□ -0.55
VCAN-207ENST00000507162 AMOTL2Q9Y2J4 779 aa11.61□□□□□ -0.55
VCAN-207ENST00000507162 CHGAP10645 457 aaKnown RBP11.6□□□□□ -0.55
VCAN-207ENST00000507162 FNBP4Q8N3X1 1017 aaPredicted RBP11.6□□□□□ -0.55
VCAN-207ENST00000507162 RRP7BPQ9NSQ0 103 aa11.6□□□□□ -0.55
VCAN-207ENST00000507162 PLEKHG1Q9ULL1 1385 aa11.59□□□□□ -0.55
VCAN-207ENST00000507162 SLC52A1Q9NWF4 448 aa11.59□□□□□ -0.55
VCAN-207ENST00000507162 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.59□□□□□ -0.55
VCAN-207ENST00000507162 CEP162Q5TB80 1403 aa11.59□□□□□ -0.55
VCAN-207ENST00000507162 MAST1Q9Y2H9 1570 aa11.58□□□□□ -0.55
VCAN-207ENST00000507162 KANK1Q14678 1352 aa11.58□□□□□ -0.56
VCAN-207ENST00000507162 GJD4Q96KN9 370 aaPredicted RBP11.58□□□□□ -0.56
VCAN-207ENST00000507162 BLMP54132 1417 aaPredicted RBP11.58□□□□□ -0.56
VCAN-207ENST00000507162 CHD2O14647 1828 aaKnown RBP11.58□□□□□ -0.56
VCAN-207ENST00000507162 MROH1Q8NDA8 1641 aa11.57□□□□□ -0.56
VCAN-207ENST00000507162 ATRNO75882 1429 aa11.56□□□□□ -0.56
VCAN-207ENST00000507162 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.56□□□□□ -0.56
VCAN-207ENST00000507162 RIMS2Q9UQ26 1411 aa11.56□□□□□ -0.56
VCAN-207ENST00000507162 ASXL1Q8IXJ9 1541 aa11.55□□□□□ -0.56
VCAN-207ENST00000507162 ARHGEF5Q12774 1597 aa11.54□□□□□ -0.56
VCAN-207ENST00000507162 LRP5O75197 1615 aa11.53□□□□□ -0.56
VCAN-207ENST00000507162 R3HDM1Q15032 1099 aaKnown RBP11.53□□□□□ -0.56
VCAN-207ENST00000507162 RNF39Q9H2S5 420 aa11.53□□□□□ -0.56
VCAN-207ENST00000507162 EHBP1L1Q8N3D4 1523 aa11.53□□□□□ -0.56
VCAN-207ENST00000507162 EIF2AK4Q9P2K8 1649 aaKnown RBP11.53□□□□□ -0.56
VCAN-207ENST00000507162 MST1RQ04912 1400 aa11.52□□□□□ -0.56
VCAN-207ENST00000507162 BAG6P46379 1132 aa11.52□□□□□ -0.57
VCAN-207ENST00000507162 KIF15Q9NS87 1388 aa11.52□□□□□ -0.57
VCAN-207ENST00000507162 DUOX2Q9NRD8 1548 aa11.51□□□□□ -0.57
VCAN-207ENST00000507162 SENP3-EIF4A1A0A087X0R7 540 aa11.51□□□□□ -0.57
VCAN-207ENST00000507162 DCAF8L1A6NGE4 600 aa11.51□□□□□ -0.57
VCAN-207ENST00000507162 ZFYVE9O95405 1425 aa11.51□□□□□ -0.57
VCAN-207ENST00000507162 SEPT12Q8IYM1 358 aa11.5□□□□□ -0.57
VCAN-207ENST00000507162 PIK3R4Q99570 1358 aa11.5□□□□□ -0.57
VCAN-207ENST00000507162 PTCH1Q13635 1447 aa11.5□□□□□ -0.57
VCAN-207ENST00000507162 ADAMTS13Q76LX8 1427 aa11.5□□□□□ -0.57
VCAN-207ENST00000507162 ADGRB3O60242 1522 aa11.5□□□□□ -0.57
VCAN-207ENST00000507162 ORAI2Q96SN7 254 aa11.49□□□□□ -0.57
VCAN-207ENST00000507162 NOS1P29475 1434 aa11.49□□□□□ -0.57
VCAN-207ENST00000507162 DCCP43146 1447 aa11.49□□□□□ -0.57
VCAN-207ENST00000507162 BCL9LQ86UU0 1499 aa11.49□□□□□ -0.57
VCAN-207ENST00000507162 EN1Q05925 392 aaPredicted RBP11.48□□□□□ -0.57
VCAN-207ENST00000507162 PTPRUQ92729 1446 aa11.48□□□□□ -0.57
VCAN-207ENST00000507162 NHSL1Q5SYE7 1610 aa11.47□□□□□ -0.57
VCAN-207ENST00000507162 SOS2Q07890 1332 aaPredicted RBP11.47□□□□□ -0.57
VCAN-207ENST00000507162 KRT27Q7Z3Y8 459 aa11.47□□□□□ -0.57
VCAN-207ENST00000507162 UNC5CLQ8IV45 518 aa11.47□□□□□ -0.57
VCAN-207ENST00000507162 CHIC2Q9UKJ5 165 aa11.47□□□□□ -0.57
VCAN-207ENST00000507162 CCDC9Q9Y3X0 531 aaKnown RBP11.47□□□□□ -0.57
VCAN-207ENST00000507162 A0A0G2JS52 829 aa11.46□□□□□ -0.57
VCAN-207ENST00000507162 MYT1Q01538 1121 aa11.46□□□□□ -0.57
VCAN-207ENST00000507162 ERBINQ96RT1 1412 aa11.44□□□□□ -0.58
VCAN-207ENST00000507162 XPCQ01831 940 aaPredicted RBP11.44□□□□□ -0.58
VCAN-207ENST00000507162 PPP1R1BQ9UD71 204 aaPredicted RBP11.43□□□□□ -0.58
VCAN-207ENST00000507162 C1orf167Q5SNV9 1468 aa11.43□□□□□ -0.58
VCAN-207ENST00000507162 RALGAPBQ86X10 1494 aa11.43□□□□□ -0.58
VCAN-207ENST00000507162 MYOM3Q5VTT5 1437 aa11.43□□□□□ -0.58
VCAN-207ENST00000507162 PLEKHG5O94827 1062 aa11.42□□□□□ -0.58
VCAN-207ENST00000507162 ADGRL3Q9HAR2 1447 aa11.42□□□□□ -0.58
VCAN-207ENST00000507162 TRPM2O94759 1503 aa11.41□□□□□ -0.58
VCAN-207ENST00000507162 MYO5BQ9ULV0 1848 aa11.41□□□□□ -0.58
VCAN-207ENST00000507162 LMTK2Q8IWU2 1503 aa11.4□□□□□ -0.58
VCAN-207ENST00000507162 ESCO1Q5FWF5 840 aa11.4□□□□□ -0.58
VCAN-207ENST00000507162 ZNF784Q8NCA9 323 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms