RNA–Protein interactions for RNA: ENST00000507002.5

SIL1-209, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-209ENST00000507002 ZMYM3Q14202 1370 aa17.72■□□□□ 0.43
SIL1-209ENST00000507002 NBPF1Q3BBV0 1214 aa17.72■□□□□ 0.43
SIL1-209ENST00000507002 RPGRIP1LQ68CZ1 1315 aa17.72■□□□□ 0.43
SIL1-209ENST00000507002 NEXMIFQ5QGS0 1516 aa17.71■□□□□ 0.43
SIL1-209ENST00000507002 IQGAP1P46940 1657 aa17.69■□□□□ 0.42
SIL1-209ENST00000507002 DDX10Q13206 875 aaKnown RBP17.69■□□□□ 0.42
SIL1-209ENST00000507002 ADGRF5Q8IZF2 1346 aa17.69■□□□□ 0.42
SIL1-209ENST00000507002 WASHC2AQ641Q2 1341 aa17.68■□□□□ 0.42
SIL1-209ENST00000507002 CCDC7Q96M83 1385 aa17.66■□□□□ 0.42
SIL1-209ENST00000507002 C3P01024 1663 aa17.66■□□□□ 0.42
SIL1-209ENST00000507002 TNRQ92752 1358 aa17.65■□□□□ 0.42
SIL1-209ENST00000507002 PIK3C2GO75747 1445 aa17.64■□□□□ 0.42
SIL1-209ENST00000507002 C11orf95C9JLR9 678 aaPredicted RBP17.64■□□□□ 0.41
SIL1-209ENST00000507002 MIER1Q8N108 512 aa17.64■□□□□ 0.41
SIL1-209ENST00000507002 ST20-MTHFSA0A0A6YYL1 179 aa17.63■□□□□ 0.41
SIL1-209ENST00000507002 ZFYVE9O95405 1425 aa17.63■□□□□ 0.41
SIL1-209ENST00000507002 A2ML1A8K2U0 1454 aa17.63■□□□□ 0.41
SIL1-209ENST00000507002 SETBP1Q9Y6X0 1596 aa17.62■□□□□ 0.41
SIL1-209ENST00000507002 STAG3Q9UJ98 1225 aa17.62■□□□□ 0.41
SIL1-209ENST00000507002 KIF7Q2M1P5 1343 aa17.62■□□□□ 0.41
SIL1-209ENST00000507002 SCAF11Q99590 1463 aaKnown RBP17.62■□□□□ 0.41
SIL1-209ENST00000507002 KDM5AP29375 1690 aaKnown RBP17.61■□□□□ 0.41
SIL1-209ENST00000507002 VGFO15240 615 aaPredicted RBP17.61■□□□□ 0.41
SIL1-209ENST00000507002 CFAP70Q5T0N1 1121 aa17.61■□□□□ 0.41
SIL1-209ENST00000507002 RIMS1Q86UR5 1692 aaKnown RBP17.59■□□□□ 0.41
SIL1-209ENST00000507002 UBR1Q8IWV7 1749 aa17.58■□□□□ 0.41
SIL1-209ENST00000507002 NUTM2DQ5VT03 806 aaPredicted RBP17.58■□□□□ 0.4
SIL1-209ENST00000507002 C14orf93Q9H972 538 aaKnown RBP17.58■□□□□ 0.4
SIL1-209ENST00000507002 ADAMTSL3P82987 1691 aa17.58■□□□□ 0.4
SIL1-209ENST00000507002 ADGRB1O14514 1584 aa17.57■□□□□ 0.4
SIL1-209ENST00000507002 NLRP1Q9C000 1473 aa17.56■□□□□ 0.4
SIL1-209ENST00000507002 CEBPAP49715 358 aaPredicted RBP17.56■□□□□ 0.4
SIL1-209ENST00000507002 RIMS2Q9UQ26 1411 aa17.55■□□□□ 0.4
SIL1-209ENST00000507002 EIF3AQ14152 1382 aaKnown RBP17.55■□□□□ 0.4
SIL1-209ENST00000507002 TESK2Q96S53 571 aa17.54■□□□□ 0.4
SIL1-209ENST00000507002 MYO3AQ8NEV4 1616 aa17.54■□□□□ 0.4
SIL1-209ENST00000507002 POLR3GLQ9BT43 218 aa17.52■□□□□ 0.4
SIL1-209ENST00000507002 ASXL1Q8IXJ9 1541 aa17.51■□□□□ 0.39
SIL1-209ENST00000507002 ALKQ9UM73 1620 aa17.5■□□□□ 0.39
SIL1-209ENST00000507002 PLPPR3Q6T4P5 718 aa17.5■□□□□ 0.39
SIL1-209ENST00000507002 DISP3Q9P2K9 1392 aa17.5■□□□□ 0.39
SIL1-209ENST00000507002 ARHGEF28Q8N1W1 1705 aaKnown RBP17.5■□□□□ 0.39
SIL1-209ENST00000507002 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.49■□□□□ 0.39
SIL1-209ENST00000507002 SETD1AO15047 1707 aaKnown RBP17.49■□□□□ 0.39
SIL1-209ENST00000507002 QRICH2Q9H0J4 1663 aa17.48■□□□□ 0.39
SIL1-209ENST00000507002 ANP32CO43423 234 aa17.48■□□□□ 0.39
SIL1-209ENST00000507002 TMF1P82094 1093 aa17.48■□□□□ 0.39
SIL1-209ENST00000507002 TMEM132EQ6IEE7 984 aa17.48■□□□□ 0.39
SIL1-209ENST00000507002 TMEM2Q9UHN6 1383 aa17.47■□□□□ 0.39
SIL1-209ENST00000507002 NRXN3Q9Y4C0 1643 aa17.47■□□□□ 0.39
SIL1-209ENST00000507002 HDGFP51858 240 aaKnown RBP17.45■□□□□ 0.38
SIL1-209ENST00000507002 SENP3Q9H4L4 574 aaPredicted RBP17.45■□□□□ 0.38
SIL1-209ENST00000507002 TRAK1Q9UPV9 953 aa17.45■□□□□ 0.38
SIL1-209ENST00000507002 SETD1BQ9UPS6 1966 aaKnown RBP17.45■□□□□ 0.38
SIL1-209ENST00000507002 SBNO2Q9Y2G9 1366 aa17.44■□□□□ 0.38
SIL1-209ENST00000507002 CENPJQ9HC77 1338 aaPredicted RBP17.44■□□□□ 0.38
SIL1-209ENST00000507002 PTPRMP28827 1452 aa17.44■□□□□ 0.38
SIL1-209ENST00000507002 CEP170BQ9Y4F5 1589 aaPredicted RBP17.43■□□□□ 0.38
SIL1-209ENST00000507002 ARHGAP23Q9P227 1491 aa17.43■□□□□ 0.38
SIL1-209ENST00000507002 ZNF142P52746 1687 aaPredicted RBP17.42■□□□□ 0.38
SIL1-209ENST00000507002 SLIT1O75093 1534 aa17.42■□□□□ 0.38
SIL1-209ENST00000507002 YTHDC2Q9H6S0 1430 aaKnown RBP17.42■□□□□ 0.38
SIL1-209ENST00000507002 SLC24A1O60721 1099 aa17.42■□□□□ 0.38
SIL1-209ENST00000507002 CDCA8Q53HL2 280 aa17.41■□□□□ 0.38
SIL1-209ENST00000507002 MYOM1P52179 1685 aa17.39■□□□□ 0.37
SIL1-209ENST00000507002 CCER2I3L3R5 266 aa17.38■□□□□ 0.37
SIL1-209ENST00000507002 THEMISQ8N1K5 641 aaPredicted RBP17.38■□□□□ 0.37
SIL1-209ENST00000507002 STK26Q9P289 416 aa17.38■□□□□ 0.37
SIL1-209ENST00000507002 PLEKHG1Q9ULL1 1385 aa17.38■□□□□ 0.37
SIL1-209ENST00000507002 DLC1Q96QB1 1528 aa17.37■□□□□ 0.37
SIL1-209ENST00000507002 KNDC1Q76NI1 1749 aa17.37■□□□□ 0.37
SIL1-209ENST00000507002 LRPPRCP42704 1394 aaKnown RBP17.37■□□□□ 0.37
SIL1-209ENST00000507002 LTKP29376 864 aa17.36■□□□□ 0.37
SIL1-209ENST00000507002 TXNDC2Q86VQ3 553 aa17.36■□□□□ 0.37
SIL1-209ENST00000507002 EID1Q9Y6B2 187 aa17.36■□□□□ 0.37
SIL1-209ENST00000507002 ADAMTS13Q76LX8 1427 aa17.34■□□□□ 0.37
SIL1-209ENST00000507002 BCANQ96GW7 911 aa17.34■□□□□ 0.37
SIL1-209ENST00000507002 PRKRIP1Q9H875 184 aaPredicted RBP17.34■□□□□ 0.37
SIL1-209ENST00000507002 TULP4Q9NRJ4 1543 aa17.33■□□□□ 0.37
SIL1-209ENST00000507002 METP08581 1390 aa17.33■□□□□ 0.36
SIL1-209ENST00000507002 AEBP2Q6ZN18 517 aaPredicted RBP17.33■□□□□ 0.36
SIL1-209ENST00000507002 ABCC11Q96J66 1382 aa17.32■□□□□ 0.36
SIL1-209ENST00000507002 MED14O60244 1454 aa17.31■□□□□ 0.36
SIL1-209ENST00000507002 DIP2AQ14689 1571 aa17.31■□□□□ 0.36
SIL1-209ENST00000507002 EVC2Q86UK5 1308 aa17.3■□□□□ 0.36
SIL1-209ENST00000507002 PRAM1Q96QH2 718 aa17.3■□□□□ 0.36
SIL1-209ENST00000507002 PANK3Q9H999 370 aa17.3■□□□□ 0.36
SIL1-209ENST00000507002 POGKQ9P215 609 aa17.3■□□□□ 0.36
SIL1-209ENST00000507002 CPS1P31327 1500 aa17.3■□□□□ 0.36
SIL1-209ENST00000507002 SAFB2Q14151 953 aaKnown RBP eCLIP17.29■□□□□ 0.36
SIL1-209ENST00000507002 YTHDC1Q96MU7 727 aaKnown RBP17.29■□□□□ 0.36
SIL1-209ENST00000507002 TECPR2O15040 1411 aa17.29■□□□□ 0.36
SIL1-209ENST00000507002 PER1O15534 1290 aaPredicted RBP17.27■□□□□ 0.36
SIL1-209ENST00000507002 PUS7Q96PZ0 661 aaKnown RBP17.27■□□□□ 0.36
SIL1-209ENST00000507002 MINK1Q8N4C8 1332 aaPredicted RBP17.26■□□□□ 0.35
SIL1-209ENST00000507002 FAM135BQ49AJ0 1406 aa17.26■□□□□ 0.35
SIL1-209ENST00000507002 SIRT1Q96EB6 747 aa17.25■□□□□ 0.35
SIL1-209ENST00000507002 TBX22Q9Y458 520 aa17.25■□□□□ 0.35
SIL1-209ENST00000507002 KTN1Q86UP2 1357 aaKnown RBP17.25■□□□□ 0.35
SIL1-209ENST00000507002 PLEKHH1Q9ULM0 1364 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms