RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 SETD1BQ9UPS6 1966 aaKnown RBP12.91□□□□□ -0.34
SCAMP1-202ENST00000506858 SPHKAPQ2M3C7 1700 aa12.9□□□□□ -0.34
SCAMP1-202ENST00000506858 UHRF1BP1Q6BDS2 1440 aa12.9□□□□□ -0.34
SCAMP1-202ENST00000506858 ZNF326Q5BKZ1 582 aaKnown RBP12.89□□□□□ -0.35
SCAMP1-202ENST00000506858 CLTCL1P53675 1640 aa12.89□□□□□ -0.35
SCAMP1-202ENST00000506858 TRPM2O94759 1503 aa12.88□□□□□ -0.35
SCAMP1-202ENST00000506858 CCDC144AA2RUR9 1427 aa12.88□□□□□ -0.35
SCAMP1-202ENST00000506858 PIK3C2BO00750 1634 aa12.88□□□□□ -0.35
SCAMP1-202ENST00000506858 MYO3AQ8NEV4 1616 aa12.88□□□□□ -0.35
SCAMP1-202ENST00000506858 LMTK3Q96Q04 1460 aa12.87□□□□□ -0.35
SCAMP1-202ENST00000506858 A2ML1A8K2U0 1454 aa12.87□□□□□ -0.35
SCAMP1-202ENST00000506858 NCKAP5LQ9HCH0 1330 aa12.87□□□□□ -0.35
SCAMP1-202ENST00000506858 LTKP29376 864 aa12.86□□□□□ -0.35
SCAMP1-202ENST00000506858 NLRP1Q9C000 1473 aa12.86□□□□□ -0.35
SCAMP1-202ENST00000506858 CEP170BQ9Y4F5 1589 aaPredicted RBP12.86□□□□□ -0.35
SCAMP1-202ENST00000506858 THEMISQ8N1K5 641 aaPredicted RBP12.85□□□□□ -0.35
SCAMP1-202ENST00000506858 KDM2AQ9Y2K7 1162 aa12.84□□□□□ -0.35
SCAMP1-202ENST00000506858 MYO5BQ9ULV0 1848 aa12.84□□□□□ -0.35
SCAMP1-202ENST00000506858 TXNDC2Q86VQ3 553 aa12.84□□□□□ -0.35
SCAMP1-202ENST00000506858 TMEM131LA2VDJ0 1609 aa12.83□□□□□ -0.36
SCAMP1-202ENST00000506858 DSG3P32926 999 aa12.83□□□□□ -0.36
SCAMP1-202ENST00000506858 SPATA31E1Q6ZUB1 1445 aa12.83□□□□□ -0.36
SCAMP1-202ENST00000506858 ADGRB3O60242 1522 aa12.82□□□□□ -0.36
SCAMP1-202ENST00000506858 UBR1Q8IWV7 1749 aa12.82□□□□□ -0.36
SCAMP1-202ENST00000506858 L3MBTL2Q969R5 705 aa12.81□□□□□ -0.36
SCAMP1-202ENST00000506858 TMEM2Q9UHN6 1383 aa12.81□□□□□ -0.36
SCAMP1-202ENST00000506858 DCAF11Q8TEB1 546 aa12.8□□□□□ -0.36
SCAMP1-202ENST00000506858 RIMS2Q9UQ26 1411 aa12.8□□□□□ -0.36
SCAMP1-202ENST00000506858 ADGRF5Q8IZF2 1346 aa12.8□□□□□ -0.36
SCAMP1-202ENST00000506858 PPP1R15AO75807 674 aaPredicted RBP12.8□□□□□ -0.36
SCAMP1-202ENST00000506858 ANKLE2Q86XL3 938 aa12.8□□□□□ -0.36
SCAMP1-202ENST00000506858 BCANQ96GW7 911 aa12.8□□□□□ -0.36
SCAMP1-202ENST00000506858 ZNF142P52746 1687 aaPredicted RBP12.79□□□□□ -0.36
SCAMP1-202ENST00000506858 KIF1BO60333 1816 aa12.78□□□□□ -0.36
SCAMP1-202ENST00000506858 EID1Q9Y6B2 187 aa12.78□□□□□ -0.36
SCAMP1-202ENST00000506858 SLC26A8Q96RN1 970 aa12.77□□□□□ -0.36
SCAMP1-202ENST00000506858 ZFYVE9O95405 1425 aa12.77□□□□□ -0.37
SCAMP1-202ENST00000506858 ARHGAP23Q9P227 1491 aa12.76□□□□□ -0.37
SCAMP1-202ENST00000506858 SLIT1O75093 1534 aa12.75□□□□□ -0.37
SCAMP1-202ENST00000506858 NEXMIFQ5QGS0 1516 aa12.75□□□□□ -0.37
SCAMP1-202ENST00000506858 SCAF11Q99590 1463 aaKnown RBP12.74□□□□□ -0.37
SCAMP1-202ENST00000506858 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.74□□□□□ -0.37
SCAMP1-202ENST00000506858 TONSLQ96HA7 1378 aa12.74□□□□□ -0.37
SCAMP1-202ENST00000506858 RPGRIP1LQ68CZ1 1315 aa12.74□□□□□ -0.37
SCAMP1-202ENST00000506858 VGFO15240 615 aaPredicted RBP12.73□□□□□ -0.37
SCAMP1-202ENST00000506858 STRCQ7RTU9 1775 aa12.73□□□□□ -0.37
SCAMP1-202ENST00000506858 CLSPNQ9HAW4 1339 aa12.73□□□□□ -0.37
SCAMP1-202ENST00000506858 HDGFP51858 240 aaKnown RBP12.73□□□□□ -0.37
SCAMP1-202ENST00000506858 NBPF8Q3BBV2 869 aa12.73□□□□□ -0.37
SCAMP1-202ENST00000506858 CFAP70Q5T0N1 1121 aa12.73□□□□□ -0.37
SCAMP1-202ENST00000506858 TMEM132EQ6IEE7 984 aa12.72□□□□□ -0.37
SCAMP1-202ENST00000506858 NPHP4O75161 1426 aaPredicted RBP12.71□□□□□ -0.37
SCAMP1-202ENST00000506858 NEURL4Q96JN8 1562 aa12.71□□□□□ -0.37
SCAMP1-202ENST00000506858 KDM5AP29375 1690 aaKnown RBP12.7□□□□□ -0.38
SCAMP1-202ENST00000506858 PLEKHG1Q9ULL1 1385 aa12.7□□□□□ -0.38
SCAMP1-202ENST00000506858 NBPF1Q3BBV0 1214 aa12.7□□□□□ -0.38
SCAMP1-202ENST00000506858 PPLO60437 1756 aa12.69□□□□□ -0.38
SCAMP1-202ENST00000506858 ADAMTS13Q76LX8 1427 aa12.69□□□□□ -0.38
SCAMP1-202ENST00000506858 RBM33Q96EV2 1170 aaKnown RBP12.68□□□□□ -0.38
SCAMP1-202ENST00000506858 STK26Q9P289 416 aa12.68□□□□□ -0.38
SCAMP1-202ENST00000506858 METP08581 1390 aa12.67□□□□□ -0.38
SCAMP1-202ENST00000506858 ZNF335Q9H4Z2 1342 aaPredicted RBP12.67□□□□□ -0.38
SCAMP1-202ENST00000506858 IFT172Q9UG01 1749 aa12.67□□□□□ -0.38
SCAMP1-202ENST00000506858 ABCB7O75027 752 aa12.66□□□□□ -0.38
SCAMP1-202ENST00000506858 ATXN8OSP0DMR3 200 aa12.66□□□□□ -0.38
SCAMP1-202ENST00000506858 C14orf93Q9H972 538 aaKnown RBP12.66□□□□□ -0.38
SCAMP1-202ENST00000506858 MED14O60244 1454 aa12.66□□□□□ -0.38
SCAMP1-202ENST00000506858 POLR1AO95602 1720 aaPredicted RBP12.66□□□□□ -0.38
SCAMP1-202ENST00000506858 TBX22Q9Y458 520 aa12.66□□□□□ -0.38
SCAMP1-202ENST00000506858 PIK3C2GO75747 1445 aa12.65□□□□□ -0.38
SCAMP1-202ENST00000506858 PRAG1Q86YV5 1406 aa12.65□□□□□ -0.38
SCAMP1-202ENST00000506858 IQGAP1P46940 1657 aa12.65□□□□□ -0.38
SCAMP1-202ENST00000506858 NRXN3Q9Y4C0 1643 aa12.64□□□□□ -0.39
SCAMP1-202ENST00000506858 MYOM2P54296 1465 aa12.64□□□□□ -0.39
SCAMP1-202ENST00000506858 ALKQ9UM73 1620 aa12.64□□□□□ -0.39
SCAMP1-202ENST00000506858 PTPRUQ92729 1446 aa12.64□□□□□ -0.39
SCAMP1-202ENST00000506858 NRXN1Q9ULB1 1477 aa12.64□□□□□ -0.39
SCAMP1-202ENST00000506858 AMOTL2Q9Y2J4 779 aa12.63□□□□□ -0.39
SCAMP1-202ENST00000506858 KCNA6P17658 529 aa12.62□□□□□ -0.39
SCAMP1-202ENST00000506858 ZBTB22O15209 634 aa12.62□□□□□ -0.39
SCAMP1-202ENST00000506858 TRAK1Q9UPV9 953 aa12.62□□□□□ -0.39
SCAMP1-202ENST00000506858 SETBP1Q9Y6X0 1596 aa12.61□□□□□ -0.39
SCAMP1-202ENST00000506858 STAC3Q96MF2 364 aa12.61□□□□□ -0.39
SCAMP1-202ENST00000506858 TIMELESSQ9UNS1 1208 aa12.61□□□□□ -0.39
SCAMP1-202ENST00000506858 ASXL1Q8IXJ9 1541 aa12.6□□□□□ -0.39
SCAMP1-202ENST00000506858 SAFB2Q14151 953 aaKnown RBP eCLIP12.6□□□□□ -0.39
SCAMP1-202ENST00000506858 WAPLQ7Z5K2 1190 aa12.6□□□□□ -0.39
SCAMP1-202ENST00000506858 SP7Q8TDD2 431 aaPredicted RBP12.59□□□□□ -0.39
SCAMP1-202ENST00000506858 ROCK2O75116 1388 aaKnown RBP12.58□□□□□ -0.4
SCAMP1-202ENST00000506858 PROSER2Q86WR7 435 aaPredicted RBP12.58□□□□□ -0.4
SCAMP1-202ENST00000506858 CARD11Q9BXL7 1154 aa12.58□□□□□ -0.4
SCAMP1-202ENST00000506858 ZBTB12Q9Y330 459 aaPredicted RBP12.58□□□□□ -0.4
SCAMP1-202ENST00000506858 SETD1AO15047 1707 aaKnown RBP12.57□□□□□ -0.4
SCAMP1-202ENST00000506858 PLEKHH1Q9ULM0 1364 aa12.57□□□□□ -0.4
SCAMP1-202ENST00000506858 STRCP1A6NGW2 1772 aa12.57□□□□□ -0.4
SCAMP1-202ENST00000506858 YTHDC2Q9H6S0 1430 aaKnown RBP12.57□□□□□ -0.4
SCAMP1-202ENST00000506858 ROBO2Q9HCK4 1378 aa12.56□□□□□ -0.4
SCAMP1-202ENST00000506858 POLA2Q14181 598 aa12.56□□□□□ -0.4
SCAMP1-202ENST00000506858 HIRIP3Q9BW71 556 aaPredicted RBP12.56□□□□□ -0.4
SCAMP1-202ENST00000506858 LRPPRCP42704 1394 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms