RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 HS6ST3Q8IZP7 471 aa8.74□□□□□ -1.01
TOPBP1-205ENST00000506779 PNMA3Q9UL41 463 aa8.74□□□□□ -1.01
TOPBP1-205ENST00000506779 SMCPP49901 116 aaPredicted RBP8.73□□□□□ -1.01
TOPBP1-205ENST00000506779 FOXC1Q12948 553 aa8.73□□□□□ -1.01
TOPBP1-205ENST00000506779 LMOD2Q6P5Q4 547 aa8.73□□□□□ -1.01
TOPBP1-205ENST00000506779 NBPF26B4DH59 902 aa8.72□□□□□ -1.01
TOPBP1-205ENST00000506779 PKD2Q13563 968 aa8.72□□□□□ -1.01
TOPBP1-205ENST00000506779 S1PR4O95977 384 aa8.71□□□□□ -1.02
TOPBP1-205ENST00000506779 DDX12PQ92771 950 aa8.71□□□□□ -1.02
TOPBP1-205ENST00000506779 MAP3K7O43318 606 aa8.7□□□□□ -1.02
TOPBP1-205ENST00000506779 TLL1O43897 1013 aa8.7□□□□□ -1.02
TOPBP1-205ENST00000506779 EN1Q05925 392 aaPredicted RBP8.7□□□□□ -1.02
TOPBP1-205ENST00000506779 PCDHB3Q9Y5E6 796 aa8.7□□□□□ -1.02
TOPBP1-205ENST00000506779 BLOC1S3Q6QNY0 202 aa8.69□□□□□ -1.02
TOPBP1-205ENST00000506779 TOR4AQ9NXH8 423 aa8.69□□□□□ -1.02
TOPBP1-205ENST00000506779 PLA2G2CQ5R387 149 aa8.68□□□□□ -1.02
TOPBP1-205ENST00000506779 GMPRP36959 345 aa8.67□□□□□ -1.02
TOPBP1-205ENST00000506779 NUDT18Q6ZVK8 323 aa8.67□□□□□ -1.02
TOPBP1-205ENST00000506779 SLF2Q8IX21 1173 aa8.67□□□□□ -1.02
TOPBP1-205ENST00000506779 RYDENQ9NUL5 291 aaKnown RBP8.67□□□□□ -1.02
TOPBP1-205ENST00000506779 NKX1-1Q15270 411 aaPredicted RBP8.66□□□□□ -1.02
TOPBP1-205ENST00000506779 SWT1Q5T5J6 900 aaKnown RBP8.66□□□□□ -1.02
TOPBP1-205ENST00000506779 TRIM47Q96LD4 638 aa8.66□□□□□ -1.02
TOPBP1-205ENST00000506779 KCTD17Q8N5Z5 321 aa8.65□□□□□ -1.02
TOPBP1-205ENST00000506779 ATP13A2Q9NQ11 1180 aa8.65□□□□□ -1.02
TOPBP1-205ENST00000506779 NBR1Q14596 966 aa8.64□□□□□ -1.03
TOPBP1-205ENST00000506779 CYP4X1Q8N118 509 aa8.64□□□□□ -1.03
TOPBP1-205ENST00000506779 SLC16A10Q8TF71 515 aa8.64□□□□□ -1.03
TOPBP1-205ENST00000506779 PRR14Q9BWN1 585 aa8.64□□□□□ -1.03
TOPBP1-205ENST00000506779 DPYSL4O14531 572 aa8.62□□□□□ -1.03
TOPBP1-205ENST00000506779 CERKQ8TCT0 537 aa8.62□□□□□ -1.03
TOPBP1-205ENST00000506779 SENP2Q9HC62 589 aa8.62□□□□□ -1.03
TOPBP1-205ENST00000506779 ADH1BP00325 375 aa8.57□□□□□ -1.04
TOPBP1-205ENST00000506779 SLC4A3P48751 1232 aa8.57□□□□□ -1.04
TOPBP1-205ENST00000506779 DNAJC5Q9H3Z4 198 aa8.57□□□□□ -1.04
TOPBP1-205ENST00000506779 CHGAP10645 457 aaKnown RBP8.56□□□□□ -1.04
TOPBP1-205ENST00000506779 KCNMA1Q12791 1236 aa8.56□□□□□ -1.04
TOPBP1-205ENST00000506779 IRF7Q92985 503 aa8.56□□□□□ -1.04
TOPBP1-205ENST00000506779 SLC6A16Q9GZN6 736 aa8.56□□□□□ -1.04
TOPBP1-205ENST00000506779 NXF1Q9UBU9 619 aaKnown RBP8.56□□□□□ -1.04
TOPBP1-205ENST00000506779 GSK3AP49840 483 aa8.55□□□□□ -1.04
TOPBP1-205ENST00000506779 XP32Q5T750 250 aa8.55□□□□□ -1.04
TOPBP1-205ENST00000506779 KIFC2Q96AC6 838 aa8.55□□□□□ -1.04
TOPBP1-205ENST00000506779 RPIAP49247 311 aa8.54□□□□□ -1.04
TOPBP1-205ENST00000506779 CAMK2BQ13554 666 aa8.54□□□□□ -1.04
TOPBP1-205ENST00000506779 KRTAP4-8Q9BYQ9 185 aa8.53□□□□□ -1.04
TOPBP1-205ENST00000506779 TTC24A2A3L6 582 aaPredicted RBP8.52□□□□□ -1.05
TOPBP1-205ENST00000506779 RBM27Q9P2N5 1060 aaKnown RBP8.52□□□□□ -1.05
TOPBP1-205ENST00000506779 CD2BP2O95400 341 aaKnown RBP8.51□□□□□ -1.05
TOPBP1-205ENST00000506779 SMPD1P17405 629 aa8.5□□□□□ -1.05
TOPBP1-205ENST00000506779 PRIM1P49642 420 aaKnown RBP8.5□□□□□ -1.05
TOPBP1-205ENST00000506779 NPAS3Q8IXF0 933 aa8.5□□□□□ -1.05
TOPBP1-205ENST00000506779 ACTN4O43707 911 aaKnown RBP8.48□□□□□ -1.05
TOPBP1-205ENST00000506779 TMEM151AQ8N4L1 468 aa8.48□□□□□ -1.05
TOPBP1-205ENST00000506779 ERBB4Q15303 1308 aa8.48□□□□□ -1.05
TOPBP1-205ENST00000506779 H3BM21 787 aa8.46□□□□□ -1.06
TOPBP1-205ENST00000506779 VEGFBP49765 207 aa8.46□□□□□ -1.06
TOPBP1-205ENST00000506779 TTC13Q8NBP0 860 aa8.46□□□□□ -1.06
TOPBP1-205ENST00000506779 NR1I2O75469 434 aa8.45□□□□□ -1.06
TOPBP1-205ENST00000506779 CDHR5Q9HBB8 845 aa8.45□□□□□ -1.06
TOPBP1-205ENST00000506779 GDF11O95390 407 aa8.44□□□□□ -1.06
TOPBP1-205ENST00000506779 KMT5BQ4FZB7 885 aa8.44□□□□□ -1.06
TOPBP1-205ENST00000506779 SNIP1Q8TAD8 396 aaKnown RBP8.43□□□□□ -1.06
TOPBP1-205ENST00000506779 EYA1Q99502 592 aa8.43□□□□□ -1.06
TOPBP1-205ENST00000506779 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.42□□□□□ -1.06
TOPBP1-205ENST00000506779 GTPBP6O43824 516 aaPredicted RBP8.42□□□□□ -1.06
TOPBP1-205ENST00000506779 RASSF7Q02833 373 aa8.42□□□□□ -1.06
TOPBP1-205ENST00000506779 PDIA6Q15084 440 aa8.42□□□□□ -1.06
TOPBP1-205ENST00000506779 CADPS2Q86UW7 1296 aa8.42□□□□□ -1.06
TOPBP1-205ENST00000506779 PADI6Q6TGC4 694 aa8.41□□□□□ -1.06
TOPBP1-205ENST00000506779 J3QL48 77 aa8.4□□□□□ -1.06
TOPBP1-205ENST00000506779 HPS1Q92902 700 aa8.4□□□□□ -1.06
TOPBP1-205ENST00000506779 SCUBE3Q8IX30 993 aa8.39□□□□□ -1.07
TOPBP1-205ENST00000506779 KRTAP9-2Q9BYQ4 174 aa8.39□□□□□ -1.07
TOPBP1-205ENST00000506779 FCF1Q9Y324 198 aaKnown RBP8.39□□□□□ -1.07
TOPBP1-205ENST00000506779 WNT7AO00755 349 aa8.38□□□□□ -1.07
TOPBP1-205ENST00000506779 CFHP08603 1231 aa8.38□□□□□ -1.07
TOPBP1-205ENST00000506779 SPSB2Q99619 263 aa8.38□□□□□ -1.07
TOPBP1-205ENST00000506779 KRTAP9-6A0A140TA67 174 aa8.36□□□□□ -1.07
TOPBP1-205ENST00000506779 SPDYE16A6NNV3 312 aaPredicted RBP8.36□□□□□ -1.07
TOPBP1-205ENST00000506779 GRXCR2A6NFK2 248 aa8.35□□□□□ -1.07
TOPBP1-205ENST00000506779 NPDC1Q9NQX5 325 aaPredicted RBP8.33□□□□□ -1.08
TOPBP1-205ENST00000506779 DNAJB2P25686 324 aa8.32□□□□□ -1.08
TOPBP1-205ENST00000506779 GPAT2Q6NUI2 795 aa8.32□□□□□ -1.08
TOPBP1-205ENST00000506779 MRGPRX2Q96LB1 330 aa8.32□□□□□ -1.08
TOPBP1-205ENST00000506779 PSMG3-AS1Q96PY0 264 aa8.32□□□□□ -1.08
TOPBP1-205ENST00000506779 OSBPP22059 807 aa8.31□□□□□ -1.08
TOPBP1-205ENST00000506779 TMEM134Q9H6X4 195 aa8.31□□□□□ -1.08
TOPBP1-205ENST00000506779 IGHA1P01876 353 aa8.3□□□□□ -1.08
TOPBP1-205ENST00000506779 ZBTB24O43167 697 aaPredicted RBP8.29□□□□□ -1.08
TOPBP1-205ENST00000506779 PUS10Q3MIT2 529 aaKnown RBP8.29□□□□□ -1.08
TOPBP1-205ENST00000506779 SLC10A3P09131 477 aa8.28□□□□□ -1.08
TOPBP1-205ENST00000506779 TRIM46Q7Z4K8 759 aa8.28□□□□□ -1.08
TOPBP1-205ENST00000506779 KRTAP1-3Q8IUG1 177 aa8.28□□□□□ -1.08
TOPBP1-205ENST00000506779 RNF225M0QZC1 329 aaPredicted RBP8.27□□□□□ -1.09
TOPBP1-205ENST00000506779 VSIG8P0DPA2 414 aa8.27□□□□□ -1.09
TOPBP1-205ENST00000506779 BMP1P13497 986 aa8.27□□□□□ -1.09
TOPBP1-205ENST00000506779 FAM160A2Q8N612 972 aaPredicted RBP8.24□□□□□ -1.09
TOPBP1-205ENST00000506779 DNMT3AQ9Y6K1 912 aaPredicted RBP8.24□□□□□ -1.09
TOPBP1-205ENST00000506779 ADAMTS8Q9UP79 889 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms