RNA–Protein interactions for RNA: ENST00000506661.2

HOPX-208, Transcript of HOP homeobox, human

Gene HOPX, Length 2,540 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HOPX-208	ENST00000506661	RIOK3	O14730	519 aa	Known RBP	11.32	□□□□□ -0.6
HOPX-208	ENST00000506661	B4GALNT3	Q6L9W6	998 aa		11.32	□□□□□ -0.6
HOPX-208	ENST00000506661	TERF2IP	Q9NYB0	399 aa		11.32	□□□□□ -0.6
HOPX-208	ENST00000506661	PAK3	O75914	559 aa	Predicted RBP	11.32	□□□□□ -0.6
HOPX-208	ENST00000506661	CCDC18	Q5T9S5	1454 aa		11.31	□□□□□ -0.6
HOPX-208	ENST00000506661	IGF1R	P08069	1367 aa		11.31	□□□□□ -0.6
HOPX-208	ENST00000506661	WASHC2A	Q641Q2	1341 aa		11.31	□□□□□ -0.6
HOPX-208	ENST00000506661	UACA	Q9BZF9	1416 aa		11.31	□□□□□ -0.6
HOPX-208	ENST00000506661	KIAA1522	Q9P206	1035 aa	Predicted RBP	11.31	□□□□□ -0.6
HOPX-208	ENST00000506661	NCOA2	Q15596	1464 aa		11.3	□□□□□ -0.6
HOPX-208	ENST00000506661	SEMA3E	O15041	775 aa		11.3	□□□□□ -0.6
HOPX-208	ENST00000506661	FOSB	P53539	338 aa		11.3	□□□□□ -0.6
HOPX-208	ENST00000506661	CCDC184	Q52MB2	194 aa		11.3	□□□□□ -0.6
HOPX-208	ENST00000506661	NME8	Q8N427	588 aa		11.3	□□□□□ -0.6
HOPX-208	ENST00000506661	EVI5L	Q96CN4	794 aa		11.29	□□□□□ -0.6
HOPX-208	ENST00000506661	PTPN23	Q9H3S7	1636 aa		11.29	□□□□□ -0.6
HOPX-208	ENST00000506661	HFM1	A2PYH4	1435 aa		11.28	□□□□□ -0.6
HOPX-208	ENST00000506661	RAB11FIP3	O75154	756 aa		11.28	□□□□□ -0.6
HOPX-208	ENST00000506661	DRC1	Q96MC2	740 aa		11.28	□□□□□ -0.6
HOPX-208	ENST00000506661	PEX14	O75381	377 aa		11.27	□□□□□ -0.61
HOPX-208	ENST00000506661	FANCD2	Q9BXW9	1451 aa		11.27	□□□□□ -0.61
HOPX-208	ENST00000506661	ZBED9	Q6R2W3	1325 aa		11.27	□□□□□ -0.61
HOPX-208	ENST00000506661	PTPRK	Q15262	1439 aa		11.27	□□□□□ -0.61
HOPX-208	ENST00000506661	FGD6	Q6ZV73	1430 aa		11.27	□□□□□ -0.61
HOPX-208	ENST00000506661	CNTLN	Q9NXG0	1405 aa		11.27	□□□□□ -0.61
HOPX-208	ENST00000506661	CARMIL1	Q5VZK9	1371 aa		11.27	□□□□□ -0.61
HOPX-208	ENST00000506661	RALBP1	Q15311	655 aa		11.27	□□□□□ -0.61
HOPX-208	ENST00000506661	PHF14	O94880	888 aa		11.26	□□□□□ -0.61
HOPX-208	ENST00000506661	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.26	□□□□□ -0.61
HOPX-208	ENST00000506661	CFTR	P13569	1480 aa		11.26	□□□□□ -0.61
HOPX-208	ENST00000506661	FYCO1	Q9BQS8	1478 aa		11.26	□□□□□ -0.61
HOPX-208	ENST00000506661	HSPA5	P11021	654 aa	Known RBP	11.26	□□□□□ -0.61
HOPX-208	ENST00000506661	RTL5	Q5HYW3	569 aa	Predicted RBP	11.26	□□□□□ -0.61
HOPX-208	ENST00000506661	GIMAP6	Q6P9H5	292 aa		11.26	□□□□□ -0.61
HOPX-208	ENST00000506661	AQR	O60306	1485 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
HOPX-208	ENST00000506661	RBM26	Q5T8P6	1007 aa	Known RBP	11.25	□□□□□ -0.61
HOPX-208	ENST00000506661	FBXO41	Q8TF61	875 aa		11.25	□□□□□ -0.61
HOPX-208	ENST00000506661	AK7	Q96M32	723 aa		11.25	□□□□□ -0.61
HOPX-208	ENST00000506661	TESPA1	A2RU30	521 aa	Predicted RBP	11.24	□□□□□ -0.61
HOPX-208	ENST00000506661	EIF4G3	O43432	1585 aa	Known RBP	11.24	□□□□□ -0.61
HOPX-208	ENST00000506661	NAIP	Q13075	1403 aa		11.24	□□□□□ -0.61
HOPX-208	ENST00000506661	FGD5	Q6ZNL6	1462 aa		11.23	□□□□□ -0.61
HOPX-208	ENST00000506661	PROSER2	Q86WR7	435 aa	Predicted RBP	11.23	□□□□□ -0.61
HOPX-208	ENST00000506661	RNF25	Q96BH1	459 aa	Predicted RBP	11.23	□□□□□ -0.61
HOPX-208	ENST00000506661	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.23	□□□□□ -0.61
HOPX-208	ENST00000506661	CASKIN1	Q8WXD9	1431 aa		11.23	□□□□□ -0.61
HOPX-208	ENST00000506661	FHOD3	Q2V2M9	1422 aa		11.22	□□□□□ -0.61
HOPX-208	ENST00000506661	CDCA8	Q53HL2	280 aa		11.22	□□□□□ -0.61
HOPX-208	ENST00000506661	CLGN	O14967	610 aa		11.22	□□□□□ -0.61
HOPX-208	ENST00000506661	SREK1	Q8WXA9	508 aa	Known RBP	11.22	□□□□□ -0.61
HOPX-208	ENST00000506661	IPO9	Q96P70	1041 aa	Known RBP	11.22	□□□□□ -0.61
HOPX-208	ENST00000506661	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.22	□□□□□ -0.61
HOPX-208	ENST00000506661	PLEKHG3	A1L390	1219 aa		11.21	□□□□□ -0.61
HOPX-208	ENST00000506661	MAP4K4	O95819	1239 aa	Predicted RBP	11.21	□□□□□ -0.61
HOPX-208	ENST00000506661	MRRF	Q96E11	262 aa	Known RBP	11.21	□□□□□ -0.61
HOPX-208	ENST00000506661	POM121	Q96HA1	1249 aa		11.21	□□□□□ -0.61
HOPX-208	ENST00000506661	STAC3	Q96MF2	364 aa		11.21	□□□□□ -0.61
HOPX-208	ENST00000506661	KIF13A	Q9H1H9	1805 aa		11.21	□□□□□ -0.62
HOPX-208	ENST00000506661	SOX12	O15370	315 aa		11.2	□□□□□ -0.62
HOPX-208	ENST00000506661	FOXD4	Q12950	439 aa	Predicted RBP	11.2	□□□□□ -0.62
HOPX-208	ENST00000506661	CNGB1	Q14028	1251 aa	Predicted RBP	11.2	□□□□□ -0.62
HOPX-208	ENST00000506661	STK24	Q9Y6E0	443 aa		11.2	□□□□□ -0.62
HOPX-208	ENST00000506661	NCOA1	Q15788	1441 aa		11.2	□□□□□ -0.62
HOPX-208	ENST00000506661	DENND4B	O75064	1496 aa	Predicted RBP	11.2	□□□□□ -0.62
HOPX-208	ENST00000506661	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.2	□□□□□ -0.62
HOPX-208	ENST00000506661	C11orf95	C9JLR9	678 aa	Predicted RBP	11.19	□□□□□ -0.62
HOPX-208	ENST00000506661	MRS2	Q9HD23	443 aa		11.19	□□□□□ -0.62
HOPX-208	ENST00000506661	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.19	□□□□□ -0.62
HOPX-208	ENST00000506661	EFCAB5	A4FU69	1503 aa		11.19	□□□□□ -0.62
HOPX-208	ENST00000506661	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
HOPX-208	ENST00000506661	PDE4D	Q08499	809 aa		11.19	□□□□□ -0.62
HOPX-208	ENST00000506661	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
HOPX-208	ENST00000506661	AKNA	Q7Z591	1439 aa		11.19	□□□□□ -0.62
HOPX-208	ENST00000506661	CCDC7	Q96M83	1385 aa		11.19	□□□□□ -0.62
HOPX-208	ENST00000506661	URB2	Q14146	1524 aa	Known RBP	11.18	□□□□□ -0.62
HOPX-208	ENST00000506661	SMG6	Q86US8	1419 aa	Known RBP	11.18	□□□□□ -0.62
HOPX-208	ENST00000506661	RNF123	Q5XPI4	1314 aa		11.18	□□□□□ -0.62
HOPX-208	ENST00000506661	CARNS1	A5YM72	827 aa		11.18	□□□□□ -0.62
HOPX-208	ENST00000506661	ANP32A	P39687	249 aa	Known RBP	11.18	□□□□□ -0.62
HOPX-208	ENST00000506661	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.18	□□□□□ -0.62
HOPX-208	ENST00000506661	FMN1	Q68DA7	1419 aa		11.18	□□□□□ -0.62
HOPX-208	ENST00000506661	HECW1	Q76N89	1606 aa		11.17	□□□□□ -0.62
HOPX-208	ENST00000506661	POLR1A	O95602	1720 aa	Predicted RBP	11.17	□□□□□ -0.62
HOPX-208	ENST00000506661	CADPS2	Q86UW7	1296 aa		11.17	□□□□□ -0.62
HOPX-208	ENST00000506661	PPFIA4	O75335	1185 aa		11.16	□□□□□ -0.62
HOPX-208	ENST00000506661	PLCD3	Q8N3E9	789 aa		11.16	□□□□□ -0.62
HOPX-208	ENST00000506661	RPS6KL1	Q9Y6S9	549 aa		11.16	□□□□□ -0.62
HOPX-208	ENST00000506661	SNAPC4	Q5SXM2	1469 aa		11.16	□□□□□ -0.62
HOPX-208	ENST00000506661	ABCA5	Q8WWZ7	1642 aa		11.16	□□□□□ -0.62
HOPX-208	ENST00000506661	MCM6	Q14566	821 aa		11.16	□□□□□ -0.62
HOPX-208	ENST00000506661	PLSCR2	Q9NRY7	297 aa		11.16	□□□□□ -0.62
HOPX-208	ENST00000506661	KLHL42	Q9P2K6	505 aa		11.16	□□□□□ -0.62
HOPX-208	ENST00000506661	IVNS1ABP	Q9Y6Y0	642 aa		11.16	□□□□□ -0.62
HOPX-208	ENST00000506661	LRRIQ1	Q96JM4	1722 aa		11.16	□□□□□ -0.62
HOPX-208	ENST00000506661	RBM47	A0AV96	593 aa	Known RBP	11.15	□□□□□ -0.62
HOPX-208	ENST00000506661	KCNA1	Q09470	495 aa		11.15	□□□□□ -0.62
HOPX-208	ENST00000506661	SND1	Q7KZF4	910 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
HOPX-208	ENST00000506661	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.15	□□□□□ -0.62
HOPX-208	ENST00000506661	CYB5RL	Q6IPT4	315 aa		11.14	□□□□□ -0.63
HOPX-208	ENST00000506661	VTI1A	Q96AJ9	217 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms