RNA–Protein interactions for RNA: ENST00000506626.1

SMAD1-205, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-205ENST00000506626 RNF223E7ERA6 249 aa9.02□□□□□ -0.97
SMAD1-205ENST00000506626 SLC19A1P41440 591 aa9.02□□□□□ -0.97
SMAD1-205ENST00000506626 TTC13Q8NBP0 860 aa9.02□□□□□ -0.97
SMAD1-205ENST00000506626 SWT1Q5T5J6 900 aaKnown RBP9.01□□□□□ -0.97
SMAD1-205ENST00000506626 SPRYD7Q5W111 196 aa9.01□□□□□ -0.97
SMAD1-205ENST00000506626 HDGFP51858 240 aaKnown RBP9□□□□□ -0.97
SMAD1-205ENST00000506626 SLF2Q8IX21 1173 aa8.99□□□□□ -0.97
SMAD1-205ENST00000506626 TREML4Q6UXN2 200 aa8.98□□□□□ -0.97
SMAD1-205ENST00000506626 ZNF598Q86UK7 904 aaKnown RBP8.98□□□□□ -0.97
SMAD1-205ENST00000506626 KCNV2Q8TDN2 545 aa8.98□□□□□ -0.97
SMAD1-205ENST00000506626 ARHGEF1Q92888 912 aaKnown RBP8.98□□□□□ -0.97
SMAD1-205ENST00000506626 GDF9O60383 454 aa8.95□□□□□ -0.98
SMAD1-205ENST00000506626 ANKLE1Q8NAG6 615 aa8.95□□□□□ -0.98
SMAD1-205ENST00000506626 TLL1O43897 1013 aa8.94□□□□□ -0.98
SMAD1-205ENST00000506626 BLOC1S3Q6QNY0 202 aa8.94□□□□□ -0.98
SMAD1-205ENST00000506626 LIAT1Q6ZQX7 453 aa8.94□□□□□ -0.98
SMAD1-205ENST00000506626 NPDC1Q9NQX5 325 aaPredicted RBP8.94□□□□□ -0.98
SMAD1-205ENST00000506626 PCDHB3Q9Y5E6 796 aa8.94□□□□□ -0.98
SMAD1-205ENST00000506626 FAM187AA6NFU0 413 aa8.93□□□□□ -0.98
SMAD1-205ENST00000506626 MLLT3P42568 568 aaPredicted RBP8.93□□□□□ -0.98
SMAD1-205ENST00000506626 ZNF697Q5TEC3 545 aa8.93□□□□□ -0.98
SMAD1-205ENST00000506626 PADI6Q6TGC4 694 aa8.93□□□□□ -0.98
SMAD1-205ENST00000506626 PRR14Q9BWN1 585 aa8.93□□□□□ -0.98
SMAD1-205ENST00000506626 EYA1Q99502 592 aa8.92□□□□□ -0.98
SMAD1-205ENST00000506626 AAASQ9NRG9 546 aa8.92□□□□□ -0.98
SMAD1-205ENST00000506626 ST8SIA5O15466 376 aa8.91□□□□□ -0.98
SMAD1-205ENST00000506626 TNFRSF10AO00220 468 aa8.9□□□□□ -0.98
SMAD1-205ENST00000506626 PPEF1O14829 653 aaPredicted RBP8.9□□□□□ -0.98
SMAD1-205ENST00000506626 S1PR4O95977 384 aa8.89□□□□□ -0.99
SMAD1-205ENST00000506626 P3H3Q8IVL6 736 aa8.89□□□□□ -0.99
SMAD1-205ENST00000506626 SLC4A3P48751 1232 aa8.86□□□□□ -0.99
SMAD1-205ENST00000506626 PLA2G2CQ5R387 149 aa8.86□□□□□ -0.99
SMAD1-205ENST00000506626 CRIPAKQ8N1N5 446 aa8.86□□□□□ -0.99
SMAD1-205ENST00000506626 ACTN4O43707 911 aaKnown RBP8.84□□□□□ -0.99
SMAD1-205ENST00000506626 PLCB2Q00722 1185 aa8.84□□□□□ -0.99
SMAD1-205ENST00000506626 PTGDRQ13258 359 aa8.84□□□□□ -0.99
SMAD1-205ENST00000506626 PKD2L1Q9P0L9 805 aa8.84□□□□□ -0.99
SMAD1-205ENST00000506626 ADH1BP00325 375 aa8.82□□□□□ -1
SMAD1-205ENST00000506626 DACH1Q9UI36 760 aa8.82□□□□□ -1
SMAD1-205ENST00000506626 NUTM2FA1L443 756 aa8.81□□□□□ -1
SMAD1-205ENST00000506626 SEMA3EO15041 775 aa8.81□□□□□ -1
SMAD1-205ENST00000506626 WIPF1O43516 503 aa8.81□□□□□ -1
SMAD1-205ENST00000506626 WFS1O76024 890 aa8.81□□□□□ -1
SMAD1-205ENST00000506626 STK17AQ9UEE5 414 aa8.81□□□□□ -1
SMAD1-205ENST00000506626 AVPP01185 164 aa8.8□□□□□ -1
SMAD1-205ENST00000506626 NFX1Q12986 1120 aaKnown RBP8.8□□□□□ -1
SMAD1-205ENST00000506626 LMOD2Q6P5Q4 547 aa8.8□□□□□ -1
SMAD1-205ENST00000506626 TMEM134Q9H6X4 195 aa8.8□□□□□ -1
SMAD1-205ENST00000506626 DNAJB2P25686 324 aa8.79□□□□□ -1
SMAD1-205ENST00000506626 CFHP08603 1231 aa8.78□□□□□ -1
SMAD1-205ENST00000506626 KMT5BQ4FZB7 885 aa8.78□□□□□ -1
SMAD1-205ENST00000506626 GMPR2Q9P2T1 348 aaKnown RBP8.78□□□□□ -1
SMAD1-205ENST00000506626 ADGRG1Q9Y653 693 aa8.78□□□□□ -1
SMAD1-205ENST00000506626 RBM46Q8TBY0 533 aaKnown RBP8.77□□□□□ -1.01
SMAD1-205ENST00000506626 SLC6A16Q9GZN6 736 aa8.77□□□□□ -1.01
SMAD1-205ENST00000506626 TOR4AQ9NXH8 423 aa8.77□□□□□ -1.01
SMAD1-205ENST00000506626 FCHSD2O94868 740 aa8.76□□□□□ -1.01
SMAD1-205ENST00000506626 LCE2CQ5TA81 110 aa8.76□□□□□ -1.01
SMAD1-205ENST00000506626 FOXC1Q12948 553 aa8.75□□□□□ -1.01
SMAD1-205ENST00000506626 FAM161AQ3B820 660 aa8.75□□□□□ -1.01
SMAD1-205ENST00000506626 TESPA1A2RU30 521 aaPredicted RBP8.74□□□□□ -1.01
SMAD1-205ENST00000506626 NR1I2O75469 434 aa8.74□□□□□ -1.01
SMAD1-205ENST00000506626 SLC10A3P09131 477 aa8.74□□□□□ -1.01
SMAD1-205ENST00000506626 RCCD1A6NED2 376 aa8.73□□□□□ -1.01
SMAD1-205ENST00000506626 SMCPP49901 116 aaPredicted RBP8.73□□□□□ -1.01
SMAD1-205ENST00000506626 CTC1Q2NKJ3 1217 aa8.73□□□□□ -1.01
SMAD1-205ENST00000506626 C11orf95C9JLR9 678 aaPredicted RBP8.72□□□□□ -1.01
SMAD1-205ENST00000506626 AXIN1O15169 862 aa8.72□□□□□ -1.01
SMAD1-205ENST00000506626 INSM1Q01101 510 aaPredicted RBP8.72□□□□□ -1.01
SMAD1-205ENST00000506626 RPIAP49247 311 aa8.71□□□□□ -1.02
SMAD1-205ENST00000506626 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.7□□□□□ -1.02
SMAD1-205ENST00000506626 HAP1P54257 671 aaPredicted RBP8.7□□□□□ -1.02
SMAD1-205ENST00000506626 HIC1Q14526 733 aa8.7□□□□□ -1.02
SMAD1-205ENST00000506626 SCUBE3Q8IX30 993 aa8.7□□□□□ -1.02
SMAD1-205ENST00000506626 RBM26Q5T8P6 1007 aaKnown RBP8.69□□□□□ -1.02
SMAD1-205ENST00000506626 SMYD5Q6GMV2 418 aa8.69□□□□□ -1.02
SMAD1-205ENST00000506626 PXYLP1Q8TE99 480 aa8.69□□□□□ -1.02
SMAD1-205ENST00000506626 LOC100996750A0A140TA64 210 aa8.68□□□□□ -1.02
SMAD1-205ENST00000506626 SPSB2Q99619 263 aa8.68□□□□□ -1.02
SMAD1-205ENST00000506626 KRTAP4-6Q9BYQ5 205 aa8.68□□□□□ -1.02
SMAD1-205ENST00000506626 OATP04181 439 aa8.67□□□□□ -1.02
SMAD1-205ENST00000506626 GPR37O15354 613 aa8.66□□□□□ -1.02
SMAD1-205ENST00000506626 METTL3Q86U44 580 aaKnown RBP8.66□□□□□ -1.02
SMAD1-205ENST00000506626 CYP4X1Q8N118 509 aa8.66□□□□□ -1.02
SMAD1-205ENST00000506626 GNPATO15228 680 aa8.65□□□□□ -1.02
SMAD1-205ENST00000506626 PUS10Q3MIT2 529 aaKnown RBP8.65□□□□□ -1.02
SMAD1-205ENST00000506626 FECHP22830 423 aa8.64□□□□□ -1.03
SMAD1-205ENST00000506626 FCF1Q9Y324 198 aaKnown RBP8.64□□□□□ -1.03
SMAD1-205ENST00000506626 TERTO14746 1132 aaKnown RBP8.63□□□□□ -1.03
SMAD1-205ENST00000506626 SNRPBP14678 240 aaKnown RBP8.63□□□□□ -1.03
SMAD1-205ENST00000506626 THAP11Q96EK4 314 aa8.63□□□□□ -1.03
SMAD1-205ENST00000506626 KDM2AQ9Y2K7 1162 aa8.63□□□□□ -1.03
SMAD1-205ENST00000506626 CD2BP2O95400 341 aaKnown RBP8.62□□□□□ -1.03
SMAD1-205ENST00000506626 ATP13A2Q9NQ11 1180 aa8.62□□□□□ -1.03
SMAD1-205ENST00000506626 TRIM47Q96LD4 638 aa8.61□□□□□ -1.03
SMAD1-205ENST00000506626 SMPD1P17405 629 aa8.6□□□□□ -1.03
SMAD1-205ENST00000506626 GPIHBP1Q8IV16 184 aa8.59□□□□□ -1.03
SMAD1-205ENST00000506626 FAM160A2Q8N612 972 aaPredicted RBP8.59□□□□□ -1.03
SMAD1-205ENST00000506626 MORN1Q5T089 497 aa8.58□□□□□ -1.04
SMAD1-205ENST00000506626 RSPH4AQ5TD94 716 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms