RNA–Protein interactions for RNA: ENST00000506611.1

TRIO-208, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 526 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-208ENST00000506611 TJAP1Q5JTD0 557 aa10.67□□□□□ -0.7
TRIO-208ENST00000506611 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.66□□□□□ -0.7
TRIO-208ENST00000506611 SLC10A3P09131 477 aa10.65□□□□□ -0.7
TRIO-208ENST00000506611 A0A0G2JS52 829 aa10.64□□□□□ -0.71
TRIO-208ENST00000506611 MTRQ99707 1265 aa10.64□□□□□ -0.71
TRIO-208ENST00000506611 TULP1O00294 542 aaPredicted RBP10.62□□□□□ -0.71
TRIO-208ENST00000506611 KCNC4Q03721 635 aa10.62□□□□□ -0.71
TRIO-208ENST00000506611 LMOD2Q6P5Q4 547 aa10.62□□□□□ -0.71
TRIO-208ENST00000506611 ZNF516Q92618 1163 aa10.61□□□□□ -0.71
TRIO-208ENST00000506611 MAP2K5Q13163 448 aa10.6□□□□□ -0.71
TRIO-208ENST00000506611 IRF6O14896 467 aa10.58□□□□□ -0.72
TRIO-208ENST00000506611 CFHP08603 1231 aa10.58□□□□□ -0.72
TRIO-208ENST00000506611 COPS2P61201 443 aa10.57□□□□□ -0.72
TRIO-208ENST00000506611 NECTIN2Q92692 538 aa10.57□□□□□ -0.72
TRIO-208ENST00000506611 IL21Q9HBE4 155 aa10.57□□□□□ -0.72
TRIO-208ENST00000506611 SLC4A3P48751 1232 aa10.56□□□□□ -0.72
TRIO-208ENST00000506611 NKX2-3Q8TAU0 364 aa10.56□□□□□ -0.72
TRIO-208ENST00000506611 DAXXQ9UER7 740 aaPredicted RBP10.56□□□□□ -0.72
TRIO-208ENST00000506611 BLOC1S3Q6QNY0 202 aa10.55□□□□□ -0.72
TRIO-208ENST00000506611 CCDC102AQ96A19 550 aa10.55□□□□□ -0.72
TRIO-208ENST00000506611 ACTN4O43707 911 aaKnown RBP10.54□□□□□ -0.72
TRIO-208ENST00000506611 ZC3H15Q8WU90 426 aaKnown RBP10.54□□□□□ -0.72
TRIO-208ENST00000506611 MINK1Q8N4C8 1332 aaPredicted RBP10.54□□□□□ -0.72
TRIO-208ENST00000506611 PCDHB3Q9Y5E6 796 aa10.53□□□□□ -0.72
TRIO-208ENST00000506611 ZMYND10O75800 440 aa10.52□□□□□ -0.73
TRIO-208ENST00000506611 DDX11L8A8MPP1 907 aa10.51□□□□□ -0.73
TRIO-208ENST00000506611 PRR14Q9BWN1 585 aa10.51□□□□□ -0.73
TRIO-208ENST00000506611 ZPR1O75312 459 aa10.5□□□□□ -0.73
TRIO-208ENST00000506611 TLL1O43897 1013 aa10.49□□□□□ -0.73
TRIO-208ENST00000506611 SLC24A1O60721 1099 aa10.49□□□□□ -0.73
TRIO-208ENST00000506611 KMT5BQ4FZB7 885 aa10.49□□□□□ -0.73
TRIO-208ENST00000506611 BARGINQ6ZT62 677 aa10.49□□□□□ -0.73
TRIO-208ENST00000506611 MDM2Q00987 491 aaPredicted RBP10.48□□□□□ -0.73
TRIO-208ENST00000506611 PPP1R18Q6NYC8 613 aa10.48□□□□□ -0.73
TRIO-208ENST00000506611 RDH13Q8NBN7 331 aa10.48□□□□□ -0.73
TRIO-208ENST00000506611 PUS10Q3MIT2 529 aaKnown RBP10.47□□□□□ -0.73
TRIO-208ENST00000506611 TMUB1Q9BVT8 246 aa10.47□□□□□ -0.73
TRIO-208ENST00000506611 RGS20O76081 388 aa10.46□□□□□ -0.73
TRIO-208ENST00000506611 GCGRP47871 477 aa10.46□□□□□ -0.73
TRIO-208ENST00000506611 REPIN1Q9BWE0 567 aaKnown RBP10.46□□□□□ -0.73
TRIO-208ENST00000506611 CD46P15529 392 aa10.44□□□□□ -0.74
TRIO-208ENST00000506611 FUT2Q10981 343 aa10.44□□□□□ -0.74
TRIO-208ENST00000506611 SULF1Q8IWU6 871 aa10.44□□□□□ -0.74
TRIO-208ENST00000506611 RSPH4AQ5TD94 716 aa10.43□□□□□ -0.74
TRIO-208ENST00000506611 MORN1Q5T089 497 aa10.42□□□□□ -0.74
TRIO-208ENST00000506611 SCUBE3Q8IX30 993 aa10.42□□□□□ -0.74
TRIO-208ENST00000506611 KRI1Q8N9T8 703 aaKnown RBP10.41□□□□□ -0.74
TRIO-208ENST00000506611 GPCPD1Q9NPB8 672 aa10.4□□□□□ -0.74
TRIO-208ENST00000506611 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.4□□□□□ -0.74
TRIO-208ENST00000506611 FAM217BQ9NTX9 383 aaPredicted RBP10.4□□□□□ -0.74
TRIO-208ENST00000506611 NR1I2O75469 434 aa10.38□□□□□ -0.75
TRIO-208ENST00000506611 EMID1Q96A84 441 aaPredicted RBP10.38□□□□□ -0.75
TRIO-208ENST00000506611 THAP11Q96EK4 314 aa10.38□□□□□ -0.75
TRIO-208ENST00000506611 SLC27A5Q9Y2P5 690 aa10.38□□□□□ -0.75
TRIO-208ENST00000506611 S1PR4O95977 384 aa10.37□□□□□ -0.75
TRIO-208ENST00000506611 CLCN1P35523 988 aa10.37□□□□□ -0.75
TRIO-208ENST00000506611 ATP6V1AP38606 617 aa10.37□□□□□ -0.75
TRIO-208ENST00000506611 AMHR2Q16671 573 aa10.37□□□□□ -0.75
TRIO-208ENST00000506611 RNF223E7ERA6 249 aa10.36□□□□□ -0.75
TRIO-208ENST00000506611 ADH1BP00325 375 aa10.36□□□□□ -0.75
TRIO-208ENST00000506611 HLA-CQ95604 372 aa10.36□□□□□ -0.75
TRIO-208ENST00000506611 PPEF1O14829 653 aaPredicted RBP10.35□□□□□ -0.75
TRIO-208ENST00000506611 PRKD2Q9BZL6 878 aa10.34□□□□□ -0.75
TRIO-208ENST00000506611 TRIM66O15016 1216 aa10.33□□□□□ -0.76
TRIO-208ENST00000506611 RNF19BQ6ZMZ0 732 aa10.33□□□□□ -0.76
TRIO-208ENST00000506611 SPSB2Q99619 263 aa10.33□□□□□ -0.76
TRIO-208ENST00000506611 KDM4AO75164 1064 aa10.32□□□□□ -0.76
TRIO-208ENST00000506611 FAM160A2Q8N612 972 aaPredicted RBP10.32□□□□□ -0.76
TRIO-208ENST00000506611 GIGYF2Q6Y7W6 1299 aaKnown RBP10.31□□□□□ -0.76
TRIO-208ENST00000506611 PARP9Q8IXQ6 854 aa10.31□□□□□ -0.76
TRIO-208ENST00000506611 SLC6A16Q9GZN6 736 aa10.31□□□□□ -0.76
TRIO-208ENST00000506611 HOXA2O43364 376 aa10.3□□□□□ -0.76
TRIO-208ENST00000506611 SSTR3P32745 418 aaPredicted RBP10.3□□□□□ -0.76
TRIO-208ENST00000506611 GGCXP38435 758 aa10.3□□□□□ -0.76
TRIO-208ENST00000506611 TTLL12Q14166 644 aaPredicted RBP10.3□□□□□ -0.76
TRIO-208ENST00000506611 PLA2G2CQ5R387 149 aa10.3□□□□□ -0.76
TRIO-208ENST00000506611 BRICD5Q6PL45 260 aa10.3□□□□□ -0.76
TRIO-208ENST00000506611 SLC24A3Q9HC58 644 aa10.3□□□□□ -0.76
TRIO-208ENST00000506611 PRDM9Q9NQV7 894 aa10.3□□□□□ -0.76
TRIO-208ENST00000506611 GUCA2AQ02747 115 aa10.29□□□□□ -0.76
TRIO-208ENST00000506611 BCANQ96GW7 911 aa10.29□□□□□ -0.76
TRIO-208ENST00000506611 AK7Q96M32 723 aa10.29□□□□□ -0.76
TRIO-208ENST00000506611 ANKLE1Q8NAG6 615 aa10.28□□□□□ -0.76
TRIO-208ENST00000506611 IRX2Q9BZI1 471 aaPredicted RBP10.28□□□□□ -0.76
TRIO-208ENST00000506611 SALL2Q9Y467 1007 aaPredicted RBP10.28□□□□□ -0.76
TRIO-208ENST00000506611 V9GY48 417 aaPredicted RBP10.28□□□□□ -0.76
TRIO-208ENST00000506611 FMNL1O95466 1100 aaPredicted RBP10.27□□□□□ -0.77
TRIO-208ENST00000506611 MS4A1P11836 297 aa10.26□□□□□ -0.77
TRIO-208ENST00000506611 LIAT1Q6ZQX7 453 aa10.26□□□□□ -0.77
TRIO-208ENST00000506611 USP46P62068 366 aa10.25□□□□□ -0.77
TRIO-208ENST00000506611 GRIPAP1Q4V328 841 aa10.25□□□□□ -0.77
TRIO-208ENST00000506611 SPIRE2Q8WWL2 714 aa10.24□□□□□ -0.77
TRIO-208ENST00000506611 SLC19A1P41440 591 aa10.23□□□□□ -0.77
TRIO-208ENST00000506611 SYMPKQ92797 1274 aaKnown RBP10.23□□□□□ -0.77
TRIO-208ENST00000506611 PCDHGC3Q9UN70 934 aa10.23□□□□□ -0.77
TRIO-208ENST00000506611 PDE4DQ08499 809 aa10.22□□□□□ -0.77
TRIO-208ENST00000506611 MSS51Q4VC12 460 aa10.22□□□□□ -0.77
TRIO-208ENST00000506611 NDUFV2P19404 249 aa10.21□□□□□ -0.77
TRIO-208ENST00000506611 TRIM67Q6ZTA4 783 aa10.21□□□□□ -0.77
TRIO-208ENST00000506611 NUTM1Q86Y26 1132 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms