RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 SENP3-EIF4A1A0A087X0R7 540 aa16.76■□□□□ 0.27
LIN54-206ENST00000506560 ZMYM4Q5VZL5 1548 aa16.76■□□□□ 0.27
LIN54-206ENST00000506560 IFT172Q9UG01 1749 aa16.76■□□□□ 0.27
LIN54-206ENST00000506560 FBXO31Q5XUX0 539 aaPredicted RBP16.75■□□□□ 0.27
LIN54-206ENST00000506560 MLECQ14165 292 aa16.74■□□□□ 0.27
LIN54-206ENST00000506560 IDI1Q13907 227 aa16.73■□□□□ 0.27
LIN54-206ENST00000506560 MYOM2P54296 1465 aa16.73■□□□□ 0.27
LIN54-206ENST00000506560 SCAF11Q99590 1463 aaKnown RBP16.73■□□□□ 0.27
LIN54-206ENST00000506560 NEURL4Q96JN8 1562 aa16.73■□□□□ 0.27
LIN54-206ENST00000506560 TMF1P82094 1093 aa16.72■□□□□ 0.27
LIN54-206ENST00000506560 PER1O15534 1290 aaPredicted RBP16.72■□□□□ 0.27
LIN54-206ENST00000506560 PANK3Q9H999 370 aa16.71■□□□□ 0.27
LIN54-206ENST00000506560 TMEM132EQ6IEE7 984 aa16.71■□□□□ 0.26
LIN54-206ENST00000506560 STAC3Q96MF2 364 aa16.7■□□□□ 0.26
LIN54-206ENST00000506560 NRXN1Q9ULB1 1477 aa16.7■□□□□ 0.26
LIN54-206ENST00000506560 PPLO60437 1756 aa16.7■□□□□ 0.26
LIN54-206ENST00000506560 PIK3C2BO00750 1634 aa16.68■□□□□ 0.26
LIN54-206ENST00000506560 CC2D1BQ5T0F9 858 aaKnown RBP16.68■□□□□ 0.26
LIN54-206ENST00000506560 ARHGAP31Q2M1Z3 1444 aa16.67■□□□□ 0.26
LIN54-206ENST00000506560 MYO5BQ9ULV0 1848 aa16.67■□□□□ 0.26
LIN54-206ENST00000506560 KIAA1210Q9ULL0 1709 aa16.67■□□□□ 0.26
LIN54-206ENST00000506560 PIK3C2GO75747 1445 aa16.67■□□□□ 0.26
LIN54-206ENST00000506560 TRAK1Q9UPV9 953 aa16.66■□□□□ 0.26
LIN54-206ENST00000506560 SUPT16HQ9Y5B9 1047 aaKnown RBP16.66■□□□□ 0.26
LIN54-206ENST00000506560 ZC3H13Q5T200 1668 aaKnown RBP16.66■□□□□ 0.26
LIN54-206ENST00000506560 PREX1Q8TCU6 1659 aa16.65■□□□□ 0.26
LIN54-206ENST00000506560 C14orf93Q9H972 538 aaKnown RBP16.64■□□□□ 0.25
LIN54-206ENST00000506560 NEXMIFQ5QGS0 1516 aa16.63■□□□□ 0.25
LIN54-206ENST00000506560 CLTCQ00610 1675 aaKnown RBP16.62■□□□□ 0.25
LIN54-206ENST00000506560 TMC1Q8TDI8 760 aa16.62■□□□□ 0.25
LIN54-206ENST00000506560 ADGRB1O14514 1584 aa16.61■□□□□ 0.25
LIN54-206ENST00000506560 PNISRQ8TF01 805 aaKnown RBP16.61■□□□□ 0.25
LIN54-206ENST00000506560 PARD3Q8TEW0 1356 aa16.61■□□□□ 0.25
LIN54-206ENST00000506560 MYBBP1AQ9BQG0 1328 aaKnown RBP16.61■□□□□ 0.25
LIN54-206ENST00000506560 ERVK-7P63135 1459 aa16.61■□□□□ 0.25
LIN54-206ENST00000506560 EIF3AQ14152 1382 aaKnown RBP16.6■□□□□ 0.25
LIN54-206ENST00000506560 KTN1Q86UP2 1357 aaKnown RBP16.6■□□□□ 0.25
LIN54-206ENST00000506560 AGLP35573 1532 aa16.6■□□□□ 0.25
LIN54-206ENST00000506560 RALBP1Q15311 655 aa16.6■□□□□ 0.25
LIN54-206ENST00000506560 BCANQ96GW7 911 aa16.6■□□□□ 0.25
LIN54-206ENST00000506560 SLC52A1Q9NWF4 448 aa16.6■□□□□ 0.25
LIN54-206ENST00000506560 ARHGEF40Q8TER5 1519 aa16.59■□□□□ 0.25
LIN54-206ENST00000506560 RPGRIP1LQ68CZ1 1315 aa16.59■□□□□ 0.25
LIN54-206ENST00000506560 REREQ9P2R6 1566 aa16.59■□□□□ 0.25
LIN54-206ENST00000506560 MYOM1P52179 1685 aa16.59■□□□□ 0.25
LIN54-206ENST00000506560 TMEM131LA2VDJ0 1609 aa16.59■□□□□ 0.25
LIN54-206ENST00000506560 FKBP8Q14318 412 aa16.58■□□□□ 0.25
LIN54-206ENST00000506560 CENPJQ9HC77 1338 aaPredicted RBP16.57■□□□□ 0.24
LIN54-206ENST00000506560 VGFO15240 615 aaPredicted RBP16.57■□□□□ 0.24
LIN54-206ENST00000506560 SAFB2Q14151 953 aaKnown RBP eCLIP16.57■□□□□ 0.24
LIN54-206ENST00000506560 SETBP1Q9Y6X0 1596 aa16.56■□□□□ 0.24
LIN54-206ENST00000506560 STK26Q9P289 416 aa16.55■□□□□ 0.24
LIN54-206ENST00000506560 BRD4O60885 1362 aaPredicted RBP16.55■□□□□ 0.24
LIN54-206ENST00000506560 AMER1Q5JTC6 1135 aaPredicted RBP16.55■□□□□ 0.24
LIN54-206ENST00000506560 ZBED9Q6R2W3 1325 aa16.54■□□□□ 0.24
LIN54-206ENST00000506560 KDM5AP29375 1690 aaKnown RBP16.54■□□□□ 0.24
LIN54-206ENST00000506560 ASXL1Q8IXJ9 1541 aa16.54■□□□□ 0.24
LIN54-206ENST00000506560 NLRP13Q86W25 1043 aa16.54■□□□□ 0.24
LIN54-206ENST00000506560 STAG3Q9UJ98 1225 aa16.54■□□□□ 0.24
LIN54-206ENST00000506560 IRX6P78412 446 aaPredicted RBP16.53■□□□□ 0.24
LIN54-206ENST00000506560 KNSTRNQ9Y448 316 aa16.53■□□□□ 0.24
LIN54-206ENST00000506560 MYO3AQ8NEV4 1616 aa16.53■□□□□ 0.24
LIN54-206ENST00000506560 CDCA8Q53HL2 280 aa16.53■□□□□ 0.24
LIN54-206ENST00000506560 CARD14Q9BXL6 1004 aa16.53■□□□□ 0.24
LIN54-206ENST00000506560 QRICH2Q9H0J4 1663 aa16.52■□□□□ 0.24
LIN54-206ENST00000506560 LRPPRCP42704 1394 aaKnown RBP16.51■□□□□ 0.23
LIN54-206ENST00000506560 ZMYM3Q14202 1370 aa16.5■□□□□ 0.23
LIN54-206ENST00000506560 SLC12A5Q9H2X9 1139 aa16.5■□□□□ 0.23
LIN54-206ENST00000506560 SALL2Q9Y467 1007 aaPredicted RBP16.5■□□□□ 0.23
LIN54-206ENST00000506560 SPATA31D1Q6ZQQ2 1576 aa16.49■□□□□ 0.23
LIN54-206ENST00000506560 ARHGEF28Q8N1W1 1705 aaKnown RBP16.49■□□□□ 0.23
LIN54-206ENST00000506560 TRHP20396 242 aaPredicted RBP16.49■□□□□ 0.23
LIN54-206ENST00000506560 PPP6R1Q9UPN7 881 aa16.49■□□□□ 0.23
LIN54-206ENST00000506560 SBNO2Q9Y2G9 1366 aa16.49■□□□□ 0.23
LIN54-206ENST00000506560 A2ML1A8K2U0 1454 aa16.48■□□□□ 0.23
LIN54-206ENST00000506560 ZFYVE9O95405 1425 aa16.48■□□□□ 0.23
LIN54-206ENST00000506560 PLPPR3Q6T4P5 718 aa16.47■□□□□ 0.23
LIN54-206ENST00000506560 ESF1Q9H501 851 aaKnown RBP16.47■□□□□ 0.23
LIN54-206ENST00000506560 PPP2R1AP30153 589 aa16.47■□□□□ 0.23
LIN54-206ENST00000506560 CEBPAP49715 358 aaPredicted RBP16.47■□□□□ 0.23
LIN54-206ENST00000506560 CABP2Q9NPB3 220 aa16.46■□□□□ 0.23
LIN54-206ENST00000506560 TULP4Q9NRJ4 1543 aa16.45■□□□□ 0.22
LIN54-206ENST00000506560 ALKQ9UM73 1620 aa16.44■□□□□ 0.22
LIN54-206ENST00000506560 NEFLP07196 543 aa16.43■□□□□ 0.22
LIN54-206ENST00000506560 MINK1Q8N4C8 1332 aaPredicted RBP16.43■□□□□ 0.22
LIN54-206ENST00000506560 RIMS2Q9UQ26 1411 aa16.43■□□□□ 0.22
LIN54-206ENST00000506560 PRAM1Q96QH2 718 aa16.43■□□□□ 0.22
LIN54-206ENST00000506560 PTPRMP28827 1452 aa16.42■□□□□ 0.22
LIN54-206ENST00000506560 YTHDC2Q9H6S0 1430 aaKnown RBP16.42■□□□□ 0.22
LIN54-206ENST00000506560 NSD3Q9BZ95 1437 aa16.41■□□□□ 0.22
LIN54-206ENST00000506560 ADAMTS8Q9UP79 889 aa16.4■□□□□ 0.22
LIN54-206ENST00000506560 TNNT2P45379 298 aaPredicted RBP16.39■□□□□ 0.21
LIN54-206ENST00000506560 WAPLQ7Z5K2 1190 aa16.39■□□□□ 0.21
LIN54-206ENST00000506560 EVC2Q86UK5 1308 aa16.39■□□□□ 0.21
LIN54-206ENST00000506560 SLC24A1O60721 1099 aa16.38■□□□□ 0.21
LIN54-206ENST00000506560 TNRQ92752 1358 aa16.38■□□□□ 0.21
LIN54-206ENST00000506560 PLEKHH1Q9ULM0 1364 aa16.38■□□□□ 0.21
LIN54-206ENST00000506560 POGKQ9P215 609 aa16.38■□□□□ 0.21
LIN54-206ENST00000506560 SRPK2P78362 688 aaKnown RBP16.37■□□□□ 0.21
LIN54-206ENST00000506560 NPC1L1Q9UHC9 1359 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms