RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 CCDC102AQ96A19 550 aa8.59□□□□□ -1.03
HMGB1P29-201ENST00000505659 BCANQ96GW7 911 aa8.59□□□□□ -1.03
HMGB1P29-201ENST00000505659 PLA2G2EQ9NZK7 142 aa8.59□□□□□ -1.03
HMGB1P29-201ENST00000505659 IRF6O14896 467 aa8.58□□□□□ -1.04
HMGB1P29-201ENST00000505659 APLP1P51693 650 aa8.58□□□□□ -1.04
HMGB1P29-201ENST00000505659 SLF2Q8IX21 1173 aa8.58□□□□□ -1.04
HMGB1P29-201ENST00000505659 ZMYND10O75800 440 aa8.57□□□□□ -1.04
HMGB1P29-201ENST00000505659 MINK1Q8N4C8 1332 aaPredicted RBP8.56□□□□□ -1.04
HMGB1P29-201ENST00000505659 SLC10A3P09131 477 aa8.56□□□□□ -1.04
HMGB1P29-201ENST00000505659 BARGINQ6ZT62 677 aa8.56□□□□□ -1.04
HMGB1P29-201ENST00000505659 NYAP1Q6ZVC0 841 aa8.54□□□□□ -1.04
HMGB1P29-201ENST00000505659 KRI1Q8N9T8 703 aaKnown RBP8.53□□□□□ -1.04
HMGB1P29-201ENST00000505659 CFHP08603 1231 aa8.52□□□□□ -1.05
HMGB1P29-201ENST00000505659 SLC4A3P48751 1232 aa8.52□□□□□ -1.05
HMGB1P29-201ENST00000505659 MDM2Q00987 491 aaPredicted RBP8.52□□□□□ -1.05
HMGB1P29-201ENST00000505659 DAXXQ9UER7 740 aaPredicted RBP8.52□□□□□ -1.05
HMGB1P29-201ENST00000505659 DDX11L8A8MPP1 907 aa8.51□□□□□ -1.05
HMGB1P29-201ENST00000505659 ITGBL1O95965 494 aaPredicted RBP8.51□□□□□ -1.05
HMGB1P29-201ENST00000505659 MTRQ99707 1265 aa8.51□□□□□ -1.05
HMGB1P29-201ENST00000505659 TJAP1Q5JTD0 557 aa8.5□□□□□ -1.05
HMGB1P29-201ENST00000505659 RDH13Q8NBN7 331 aa8.5□□□□□ -1.05
HMGB1P29-201ENST00000505659 COPS2P61201 443 aa8.49□□□□□ -1.05
HMGB1P29-201ENST00000505659 ZNF516Q92618 1163 aa8.49□□□□□ -1.05
HMGB1P29-201ENST00000505659 REPIN1Q9BWE0 567 aaKnown RBP8.49□□□□□ -1.05
HMGB1P29-201ENST00000505659 NECTIN2Q92692 538 aa8.48□□□□□ -1.05
HMGB1P29-201ENST00000505659 BLOC1S3Q6QNY0 202 aa8.47□□□□□ -1.05
HMGB1P29-201ENST00000505659 ACTN4O43707 911 aaKnown RBP8.46□□□□□ -1.06
HMGB1P29-201ENST00000505659 KCNC4Q03721 635 aa8.46□□□□□ -1.06
HMGB1P29-201ENST00000505659 KMT5BQ4FZB7 885 aa8.46□□□□□ -1.06
HMGB1P29-201ENST00000505659 SLC24A3Q9HC58 644 aa8.46□□□□□ -1.06
HMGB1P29-201ENST00000505659 PCDHB3Q9Y5E6 796 aa8.46□□□□□ -1.06
HMGB1P29-201ENST00000505659 NKX2-3Q8TAU0 364 aa8.45□□□□□ -1.06
HMGB1P29-201ENST00000505659 TMUB1Q9BVT8 246 aa8.45□□□□□ -1.06
HMGB1P29-201ENST00000505659 IL21Q9HBE4 155 aa8.45□□□□□ -1.06
HMGB1P29-201ENST00000505659 PUS10Q3MIT2 529 aaKnown RBP8.44□□□□□ -1.06
HMGB1P29-201ENST00000505659 IFFO2Q5TF58 517 aa8.44□□□□□ -1.06
HMGB1P29-201ENST00000505659 SULF1Q8IWU6 871 aa8.44□□□□□ -1.06
HMGB1P29-201ENST00000505659 PRR14Q9BWN1 585 aa8.44□□□□□ -1.06
HMGB1P29-201ENST00000505659 GPCPD1Q9NPB8 672 aa8.44□□□□□ -1.06
HMGB1P29-201ENST00000505659 TRIM66O15016 1216 aa8.43□□□□□ -1.06
HMGB1P29-201ENST00000505659 TLL1O43897 1013 aa8.43□□□□□ -1.06
HMGB1P29-201ENST00000505659 CD46P15529 392 aa8.43□□□□□ -1.06
HMGB1P29-201ENST00000505659 CLCN1P35523 988 aa8.43□□□□□ -1.06
HMGB1P29-201ENST00000505659 TTLL12Q14166 644 aaPredicted RBP8.43□□□□□ -1.06
HMGB1P29-201ENST00000505659 FAM217BQ9NTX9 383 aaPredicted RBP8.43□□□□□ -1.06
HMGB1P29-201ENST00000505659 A0A0G2JS52 829 aa8.42□□□□□ -1.06
HMGB1P29-201ENST00000505659 GCGRP47871 477 aa8.42□□□□□ -1.06
HMGB1P29-201ENST00000505659 FUT2Q10981 343 aa8.42□□□□□ -1.06
HMGB1P29-201ENST00000505659 AMHR2Q16671 573 aa8.42□□□□□ -1.06
HMGB1P29-201ENST00000505659 RSPH4AQ5TD94 716 aa8.42□□□□□ -1.06
HMGB1P29-201ENST00000505659 AK7Q96M32 723 aa8.42□□□□□ -1.06
HMGB1P29-201ENST00000505659 ZPR1O75312 459 aa8.4□□□□□ -1.06
HMGB1P29-201ENST00000505659 PARP9Q8IXQ6 854 aa8.4□□□□□ -1.06
HMGB1P29-201ENST00000505659 GIGYF2Q6Y7W6 1299 aaKnown RBP8.39□□□□□ -1.07
HMGB1P29-201ENST00000505659 HLA-CQ95604 372 aa8.38□□□□□ -1.07
HMGB1P29-201ENST00000505659 SSTR3P32745 418 aaPredicted RBP8.37□□□□□ -1.07
HMGB1P29-201ENST00000505659 PDE4DQ08499 809 aa8.37□□□□□ -1.07
HMGB1P29-201ENST00000505659 MORN1Q5T089 497 aa8.37□□□□□ -1.07
HMGB1P29-201ENST00000505659 SCUBE3Q8IX30 993 aa8.36□□□□□ -1.07
HMGB1P29-201ENST00000505659 KDM4AO75164 1064 aa8.35□□□□□ -1.07
HMGB1P29-201ENST00000505659 NR1I2O75469 434 aa8.35□□□□□ -1.07
HMGB1P29-201ENST00000505659 MS4A1P11836 297 aa8.35□□□□□ -1.07
HMGB1P29-201ENST00000505659 ATP6V1AP38606 617 aa8.35□□□□□ -1.07
HMGB1P29-201ENST00000505659 SLC27A5Q9Y2P5 690 aa8.35□□□□□ -1.07
HMGB1P29-201ENST00000505659 GUCA2AQ02747 115 aa8.34□□□□□ -1.07
HMGB1P29-201ENST00000505659 PPP1R18Q6NYC8 613 aa8.34□□□□□ -1.07
HMGB1P29-201ENST00000505659 HOXA2O43364 376 aa8.32□□□□□ -1.08
HMGB1P29-201ENST00000505659 S1PR4O95977 384 aa8.32□□□□□ -1.08
HMGB1P29-201ENST00000505659 RNF19BQ6ZMZ0 732 aa8.32□□□□□ -1.08
HMGB1P29-201ENST00000505659 THAP11Q96EK4 314 aa8.32□□□□□ -1.08
HMGB1P29-201ENST00000505659 ADH1BP00325 375 aa8.31□□□□□ -1.08
HMGB1P29-201ENST00000505659 TPRNQ4KMQ1 711 aa8.31□□□□□ -1.08
HMGB1P29-201ENST00000505659 BEGAINQ9BUH8 593 aa8.31□□□□□ -1.08
HMGB1P29-201ENST00000505659 PPEF1O14829 653 aaPredicted RBP8.3□□□□□ -1.08
HMGB1P29-201ENST00000505659 NUTM1Q86Y26 1132 aa8.3□□□□□ -1.08
HMGB1P29-201ENST00000505659 SPIRE2Q8WWL2 714 aa8.3□□□□□ -1.08
HMGB1P29-201ENST00000505659 SPSB2Q99619 263 aa8.3□□□□□ -1.08
HMGB1P29-201ENST00000505659 GPBP1L1Q9HC44 474 aaPredicted RBP8.3□□□□□ -1.08
HMGB1P29-201ENST00000505659 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.3□□□□□ -1.08
HMGB1P29-201ENST00000505659 USP46P62068 366 aa8.29□□□□□ -1.08
HMGB1P29-201ENST00000505659 PRDM9Q9NQV7 894 aa8.29□□□□□ -1.08
HMGB1P29-201ENST00000505659 RNF223E7ERA6 249 aa8.28□□□□□ -1.08
HMGB1P29-201ENST00000505659 NDUFV2P19404 249 aa8.28□□□□□ -1.08
HMGB1P29-201ENST00000505659 GRIPAP1Q4V328 841 aa8.28□□□□□ -1.08
HMGB1P29-201ENST00000505659 BRICD5Q6PL45 260 aa8.28□□□□□ -1.08
HMGB1P29-201ENST00000505659 FAM160A2Q8N612 972 aaPredicted RBP8.28□□□□□ -1.08
HMGB1P29-201ENST00000505659 MOXD2PA6NHM9 499 aa8.27□□□□□ -1.09
HMGB1P29-201ENST00000505659 FMNL1O95466 1100 aaPredicted RBP8.27□□□□□ -1.09
HMGB1P29-201ENST00000505659 SYMPKQ92797 1274 aaKnown RBP8.27□□□□□ -1.09
HMGB1P29-201ENST00000505659 SLC6A16Q9GZN6 736 aa8.27□□□□□ -1.09
HMGB1P29-201ENST00000505659 PCDHGC3Q9UN70 934 aa8.27□□□□□ -1.09
HMGB1P29-201ENST00000505659 TBC1D2Q9BYX2 928 aa8.26□□□□□ -1.09
HMGB1P29-201ENST00000505659 EMID1Q96A84 441 aaPredicted RBP8.25□□□□□ -1.09
HMGB1P29-201ENST00000505659 FDX1P10109 184 aa8.24□□□□□ -1.09
HMGB1P29-201ENST00000505659 GGCXP38435 758 aa8.24□□□□□ -1.09
HMGB1P29-201ENST00000505659 PLA2G2CQ5R387 149 aa8.24□□□□□ -1.09
HMGB1P29-201ENST00000505659 PRKD2Q9BZL6 878 aa8.24□□□□□ -1.09
HMGB1P29-201ENST00000505659 KDM4CQ9H3R0 1056 aa8.24□□□□□ -1.09
HMGB1P29-201ENST00000505659 RGS20O76081 388 aa8.23□□□□□ -1.09
HMGB1P29-201ENST00000505659 PRKCSHP14314 528 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms