RNA–Protein interactions for RNA: ENST00000505566.1

FBXO4-204, Transcript of F-box protein 4, humanhuman

TSL 2

Gene FBXO4, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO4-204ENST00000505566 GNPATO15228 680 aa13.05□□□□□ -0.32
FBXO4-204ENST00000505566 METTL3Q86U44 580 aaKnown RBP13.05□□□□□ -0.32
FBXO4-204ENST00000505566 SLC10A3P09131 477 aa13.03□□□□□ -0.32
FBXO4-204ENST00000505566 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.02□□□□□ -0.33
FBXO4-204ENST00000505566 NKX2-3Q8TAU0 364 aa13.02□□□□□ -0.33
FBXO4-204ENST00000505566 PHOX2BQ99453 314 aa13.01□□□□□ -0.33
FBXO4-204ENST00000505566 NECTIN2Q92692 538 aa13□□□□□ -0.33
FBXO4-204ENST00000505566 OATP04181 439 aa12.99□□□□□ -0.33
FBXO4-204ENST00000505566 COPS2P61201 443 aa12.99□□□□□ -0.33
FBXO4-204ENST00000505566 GPIHBP1Q8IV16 184 aa12.97□□□□□ -0.33
FBXO4-204ENST00000505566 NLRP7Q8WX94 980 aa12.97□□□□□ -0.33
FBXO4-204ENST00000505566 BLOC1S3Q6QNY0 202 aa12.96□□□□□ -0.33
FBXO4-204ENST00000505566 CFHP08603 1231 aa12.95□□□□□ -0.34
FBXO4-204ENST00000505566 PPP1R18Q6NYC8 613 aa12.95□□□□□ -0.34
FBXO4-204ENST00000505566 ACTN4O43707 911 aaKnown RBP12.94□□□□□ -0.34
FBXO4-204ENST00000505566 PCDHB3Q9Y5E6 796 aa12.94□□□□□ -0.34
FBXO4-204ENST00000505566 ZPR1O75312 459 aa12.93□□□□□ -0.34
FBXO4-204ENST00000505566 SLC4A3P48751 1232 aa12.92□□□□□ -0.34
FBXO4-204ENST00000505566 PRR14Q9BWN1 585 aa12.92□□□□□ -0.34
FBXO4-204ENST00000505566 TLL1O43897 1013 aa12.9□□□□□ -0.34
FBXO4-204ENST00000505566 IRX2Q9BZI1 471 aaPredicted RBP12.88□□□□□ -0.35
FBXO4-204ENST00000505566 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.88□□□□□ -0.35
FBXO4-204ENST00000505566 KMT5BQ4FZB7 885 aa12.87□□□□□ -0.35
FBXO4-204ENST00000505566 DAXXQ9UER7 740 aaPredicted RBP12.87□□□□□ -0.35
FBXO4-204ENST00000505566 EMID1Q96A84 441 aaPredicted RBP12.84□□□□□ -0.35
FBXO4-204ENST00000505566 MAP2K5Q13163 448 aa12.83□□□□□ -0.36
FBXO4-204ENST00000505566 PRKD2Q9BZL6 878 aa12.83□□□□□ -0.36
FBXO4-204ENST00000505566 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.82□□□□□ -0.36
FBXO4-204ENST00000505566 PUS10Q3MIT2 529 aaKnown RBP12.81□□□□□ -0.36
FBXO4-204ENST00000505566 DDX11L8A8MPP1 907 aa12.79□□□□□ -0.36
FBXO4-204ENST00000505566 RNF223E7ERA6 249 aa12.79□□□□□ -0.36
FBXO4-204ENST00000505566 IRF6O14896 467 aa12.79□□□□□ -0.36
FBXO4-204ENST00000505566 SCUBE3Q8IX30 993 aa12.78□□□□□ -0.36
FBXO4-204ENST00000505566 TMUB1Q9BVT8 246 aa12.78□□□□□ -0.36
FBXO4-204ENST00000505566 V9GY48 417 aaPredicted RBP12.78□□□□□ -0.36
FBXO4-204ENST00000505566 FUT2Q10981 343 aa12.77□□□□□ -0.37
FBXO4-204ENST00000505566 LCE2BO14633 110 aa12.76□□□□□ -0.37
FBXO4-204ENST00000505566 S1PR4O95977 384 aa12.76□□□□□ -0.37
FBXO4-204ENST00000505566 GCGRP47871 477 aa12.76□□□□□ -0.37
FBXO4-204ENST00000505566 MORN1Q5T089 497 aa12.76□□□□□ -0.37
FBXO4-204ENST00000505566 RDH13Q8NBN7 331 aa12.76□□□□□ -0.37
FBXO4-204ENST00000505566 NR1I2O75469 434 aa12.75□□□□□ -0.37
FBXO4-204ENST00000505566 ADH1BP00325 375 aa12.75□□□□□ -0.37
FBXO4-204ENST00000505566 CCDC102AQ96A19 550 aa12.75□□□□□ -0.37
FBXO4-204ENST00000505566 MINK1Q8N4C8 1332 aaPredicted RBP12.74□□□□□ -0.37
FBXO4-204ENST00000505566 PPEF1O14829 653 aaPredicted RBP12.73□□□□□ -0.37
FBXO4-204ENST00000505566 THAP11Q96EK4 314 aa12.73□□□□□ -0.37
FBXO4-204ENST00000505566 GGCXP38435 758 aa12.72□□□□□ -0.37
FBXO4-204ENST00000505566 TULP1O00294 542 aaPredicted RBP12.71□□□□□ -0.37
FBXO4-204ENST00000505566 CD46P15529 392 aa12.71□□□□□ -0.37
FBXO4-204ENST00000505566 RSPH4AQ5TD94 716 aa12.71□□□□□ -0.37
FBXO4-204ENST00000505566 LMOD2Q6P5Q4 547 aa12.71□□□□□ -0.37
FBXO4-204ENST00000505566 SULF1Q8IWU6 871 aa12.71□□□□□ -0.37
FBXO4-204ENST00000505566 PLA2G2CQ5R387 149 aa12.7□□□□□ -0.38
FBXO4-204ENST00000505566 MDM2Q00987 491 aaPredicted RBP12.69□□□□□ -0.38
FBXO4-204ENST00000505566 ANKLE1Q8NAG6 615 aa12.69□□□□□ -0.38
FBXO4-204ENST00000505566 SLC27A5Q9Y2P5 690 aa12.69□□□□□ -0.38
FBXO4-204ENST00000505566 ATP6V1AP38606 617 aa12.68□□□□□ -0.38
FBXO4-204ENST00000505566 TRIM67Q6ZTA4 783 aa12.68□□□□□ -0.38
FBXO4-204ENST00000505566 SPSB2Q99619 263 aa12.67□□□□□ -0.38
FBXO4-204ENST00000505566 GFRA3O60609 400 aa12.66□□□□□ -0.38
FBXO4-204ENST00000505566 LIAT1Q6ZQX7 453 aa12.66□□□□□ -0.38
FBXO4-204ENST00000505566 FAM160A2Q8N612 972 aaPredicted RBP12.66□□□□□ -0.38
FBXO4-204ENST00000505566 SLC6A16Q9GZN6 736 aa12.66□□□□□ -0.38
FBXO4-204ENST00000505566 REPIN1Q9BWE0 567 aaKnown RBP12.65□□□□□ -0.38
FBXO4-204ENST00000505566 ZMYND10O75800 440 aa12.63□□□□□ -0.39
FBXO4-204ENST00000505566 SLC19A1P41440 591 aa12.63□□□□□ -0.39
FBXO4-204ENST00000505566 RNF19BQ6ZMZ0 732 aa12.63□□□□□ -0.39
FBXO4-204ENST00000505566 Q6ZNB5 142 aa12.63□□□□□ -0.39
FBXO4-204ENST00000505566 NRG2O14511 850 aaPredicted RBP12.62□□□□□ -0.39
FBXO4-204ENST00000505566 LAPTM4AQ15012 233 aa12.62□□□□□ -0.39
FBXO4-204ENST00000505566 SPRYD7Q5W111 196 aa12.62□□□□□ -0.39
FBXO4-204ENST00000505566 BRICD5Q6PL45 260 aa12.62□□□□□ -0.39
FBXO4-204ENST00000505566 BARGINQ6ZT62 677 aa12.62□□□□□ -0.39
FBXO4-204ENST00000505566 ZC3H15Q8WU90 426 aaKnown RBP12.62□□□□□ -0.39
FBXO4-204ENST00000505566 SALL2Q9Y467 1007 aaPredicted RBP12.62□□□□□ -0.39
FBXO4-204ENST00000505566 HLA-CQ95604 372 aa12.61□□□□□ -0.39
FBXO4-204ENST00000505566 PRDM9Q9NQV7 894 aa12.61□□□□□ -0.39
FBXO4-204ENST00000505566 FAM217BQ9NTX9 383 aaPredicted RBP12.61□□□□□ -0.39
FBXO4-204ENST00000505566 GPCPD1Q9NPB8 672 aa12.59□□□□□ -0.39
FBXO4-204ENST00000505566 PDZRN3Q9UPQ7 1066 aa12.58□□□□□ -0.4
FBXO4-204ENST00000505566 KDM4AO75164 1064 aa12.57□□□□□ -0.4
FBXO4-204ENST00000505566 FMNL1O95466 1100 aaPredicted RBP12.57□□□□□ -0.4
FBXO4-204ENST00000505566 ZNF598Q86UK7 904 aaKnown RBP12.56□□□□□ -0.4
FBXO4-204ENST00000505566 CLCN1P35523 988 aa12.55□□□□□ -0.4
FBXO4-204ENST00000505566 MSS51Q4VC12 460 aa12.54□□□□□ -0.4
FBXO4-204ENST00000505566 FCF1Q9Y324 198 aaKnown RBP12.54□□□□□ -0.4
FBXO4-204ENST00000505566 HOXA2O43364 376 aa12.53□□□□□ -0.4
FBXO4-204ENST00000505566 GDF9O60383 454 aa12.52□□□□□ -0.41
FBXO4-204ENST00000505566 GUCA2AQ02747 115 aa12.52□□□□□ -0.41
FBXO4-204ENST00000505566 AMHR2Q16671 573 aa12.52□□□□□ -0.41
FBXO4-204ENST00000505566 ZNF697Q5TEC3 545 aa12.51□□□□□ -0.41
FBXO4-204ENST00000505566 USP46P62068 366 aa12.5□□□□□ -0.41
FBXO4-204ENST00000505566 PRR20EP86478 221 aa12.5□□□□□ -0.41
FBXO4-204ENST00000505566 PRR20CP86479 221 aa12.5□□□□□ -0.41
FBXO4-204ENST00000505566 PRR20DP86480 221 aa12.5□□□□□ -0.41
FBXO4-204ENST00000505566 PRR20BP86481 221 aa12.5□□□□□ -0.41
FBXO4-204ENST00000505566 PRR20AP86496 221 aa12.5□□□□□ -0.41
FBXO4-204ENST00000505566 GRIPAP1Q4V328 841 aa12.5□□□□□ -0.41
FBXO4-204ENST00000505566 TRAF7Q6Q0C0 670 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms