RNA–Protein interactions for RNA: ENST00000505306.5

ITGA3-204, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 5,479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-204ENST00000505306 PLEKHH2Q8IVE3 1493 aa20.66■□□□□ 0.9
ITGA3-204ENST00000505306 SLC26A8Q96RN1 970 aa20.66■□□□□ 0.9
ITGA3-204ENST00000505306 C9orf78Q9NZ63 289 aaPredicted RBP20.66■□□□□ 0.9
ITGA3-204ENST00000505306 BCL2L13Q9BXK5 485 aa20.65■□□□□ 0.9
ITGA3-204ENST00000505306 DCAF8L1A6NGE4 600 aa20.65■□□□□ 0.9
ITGA3-204ENST00000505306 SPRYD3Q8NCJ5 442 aa20.65■□□□□ 0.9
ITGA3-204ENST00000505306 SLC52A1Q9NWF4 448 aa20.65■□□□□ 0.9
ITGA3-204ENST00000505306 SF3B2Q13435 895 aaKnown RBP20.64■□□□□ 0.89
ITGA3-204ENST00000505306 DDX58O95786 925 aaKnown RBP20.64■□□□□ 0.89
ITGA3-204ENST00000505306 RIPK4P57078 832 aa20.64■□□□□ 0.89
ITGA3-204ENST00000505306 PRAM1Q96QH2 718 aa20.63■□□□□ 0.89
ITGA3-204ENST00000505306 DNMBPQ6XZF7 1577 aa20.63■□□□□ 0.89
ITGA3-204ENST00000505306 KIF21BO75037 1637 aa20.63■□□□□ 0.89
ITGA3-204ENST00000505306 GOLGA6L6A8MZA4 724 aa20.63■□□□□ 0.89
ITGA3-204ENST00000505306 HMOX1P09601 288 aa20.63■□□□□ 0.89
ITGA3-204ENST00000505306 HSP90B1P14625 803 aaKnown RBP20.63■□□□□ 0.89
ITGA3-204ENST00000505306 RRBP1Q9P2E9 1410 aaKnown RBP20.62■□□□□ 0.89
ITGA3-204ENST00000505306 TROQ12816 1431 aaPredicted RBP20.62■□□□□ 0.89
ITGA3-204ENST00000505306 SYNJ1O43426 1573 aa20.61■□□□□ 0.89
ITGA3-204ENST00000505306 APAF1O14727 1248 aa20.61■□□□□ 0.89
ITGA3-204ENST00000505306 NCBP3Q53F19 620 aaKnown RBP20.61■□□□□ 0.89
ITGA3-204ENST00000505306 FBXW7Q969H0 707 aa20.6■□□□□ 0.89
ITGA3-204ENST00000505306 NOL10Q9BSC4 688 aaKnown RBP20.59■□□□□ 0.89
ITGA3-204ENST00000505306 C9orf84Q5VXU9 1444 aa20.59■□□□□ 0.89
ITGA3-204ENST00000505306 VPS37DQ86XT2 251 aa20.59■□□□□ 0.89
ITGA3-204ENST00000505306 TSPYL4Q9UJ04 414 aa20.58■□□□□ 0.89
ITGA3-204ENST00000505306 E9PSI1 815 aa20.58■□□□□ 0.89
ITGA3-204ENST00000505306 SLKQ9H2G2 1235 aaPredicted RBP20.58■□□□□ 0.89
ITGA3-204ENST00000505306 NRDCO43847 1150 aa20.57■□□□□ 0.88
ITGA3-204ENST00000505306 KIAA0586Q9BVV6 1533 aa20.57■□□□□ 0.88
ITGA3-204ENST00000505306 MSNP26038 577 aaKnown RBP20.57■□□□□ 0.88
ITGA3-204ENST00000505306 TRIM34Q9BYJ4 488 aa20.57■□□□□ 0.88
ITGA3-204ENST00000505306 FKBP5Q13451 457 aaPredicted RBP20.56■□□□□ 0.88
ITGA3-204ENST00000505306 CD109Q6YHK3 1445 aa20.56■□□□□ 0.88
ITGA3-204ENST00000505306 LAMC3Q9Y6N6 1575 aa20.56■□□□□ 0.88
ITGA3-204ENST00000505306 ZKSCAN2Q63HK3 967 aa20.56■□□□□ 0.88
ITGA3-204ENST00000505306 ERICH3Q5RHP9 1530 aa20.55■□□□□ 0.88
ITGA3-204ENST00000505306 GZF1Q9H116 711 aaPredicted RBP20.55■□□□□ 0.88
ITGA3-204ENST00000505306 PRKRIP1Q9H875 184 aaPredicted RBP20.55■□□□□ 0.88
ITGA3-204ENST00000505306 MFAP1P55081 439 aaKnown RBP20.54■□□□□ 0.88
ITGA3-204ENST00000505306 VPS53Q5VIR6 699 aa20.54■□□□□ 0.88
ITGA3-204ENST00000505306 RBM33Q96EV2 1170 aaKnown RBP20.54■□□□□ 0.88
ITGA3-204ENST00000505306 EFCAB5A4FU69 1503 aa20.54■□□□□ 0.88
ITGA3-204ENST00000505306 TOM1L2Q6ZVM7 507 aa20.53■□□□□ 0.88
ITGA3-204ENST00000505306 AIMP1Q12904 312 aaKnown RBP20.52■□□□□ 0.88
ITGA3-204ENST00000505306 ARAP1Q96P48 1450 aa20.52■□□□□ 0.88
ITGA3-204ENST00000505306 AMOTL1Q8IY63 956 aa20.52■□□□□ 0.88
ITGA3-204ENST00000505306 RBM42Q9BTD8 480 aaKnown RBP20.52■□□□□ 0.88
ITGA3-204ENST00000505306 RAD21O60216 631 aa20.51■□□□□ 0.87
ITGA3-204ENST00000505306 RASSF8Q8NHQ8 419 aa20.51■□□□□ 0.87
ITGA3-204ENST00000505306 RILPL2Q969X0 211 aa20.51■□□□□ 0.87
ITGA3-204ENST00000505306 PRDM11Q9NQV5 511 aa20.51■□□□□ 0.87
ITGA3-204ENST00000505306 RIC3Q7Z5B4 369 aa20.51■□□□□ 0.87
ITGA3-204ENST00000505306 HTATSF1O43719 755 aaKnown RBP20.5■□□□□ 0.87
ITGA3-204ENST00000505306 PPP1R1BQ9UD71 204 aaPredicted RBP20.5■□□□□ 0.87
ITGA3-204ENST00000505306 RUNDC1Q96C34 613 aa20.5■□□□□ 0.87
ITGA3-204ENST00000505306 MARCH6O60337 910 aa20.5■□□□□ 0.87
ITGA3-204ENST00000505306 PLEKHO1Q53GL0 409 aaPredicted RBP20.5■□□□□ 0.87
ITGA3-204ENST00000505306 GNAI1P63096 354 aa20.5■□□□□ 0.87
ITGA3-204ENST00000505306 GSE1Q14687 1217 aa20.5■□□□□ 0.87
ITGA3-204ENST00000505306 LRRFIP1Q32MZ4 808 aaKnown RBP20.5■□□□□ 0.87
ITGA3-204ENST00000505306 CDK19Q9BWU1 502 aa20.5■□□□□ 0.87
ITGA3-204ENST00000505306 TOP2BQ02880 1626 aa20.49■□□□□ 0.87
ITGA3-204ENST00000505306 TATP17735 454 aaPredicted RBP20.49■□□□□ 0.87
ITGA3-204ENST00000505306 NOL8Q76FK4 1167 aaKnown RBP20.49■□□□□ 0.87
ITGA3-204ENST00000505306 PDE4AP27815 886 aa20.48■□□□□ 0.87
ITGA3-204ENST00000505306 API5Q9BZZ5 524 aaKnown RBP20.48■□□□□ 0.87
ITGA3-204ENST00000505306 HFM1A2PYH4 1435 aa20.48■□□□□ 0.87
ITGA3-204ENST00000505306 GOLGA6L3A6NEY3 463 aa20.48■□□□□ 0.87
ITGA3-204ENST00000505306 RSPH6AQ9H0K4 717 aa20.48■□□□□ 0.87
ITGA3-204ENST00000505306 CTDP1Q9Y5B0 961 aaPredicted RBP20.48■□□□□ 0.87
ITGA3-204ENST00000505306 ANKRD45Q5TZF3 282 aa20.47■□□□□ 0.87
ITGA3-204ENST00000505306 WASHC2AQ641Q2 1341 aa20.47■□□□□ 0.87
ITGA3-204ENST00000505306 SMG6Q86US8 1419 aaKnown RBP20.47■□□□□ 0.87
ITGA3-204ENST00000505306 EHBP1L1Q8N3D4 1523 aa20.46■□□□□ 0.87
ITGA3-204ENST00000505306 XPCQ01831 940 aaPredicted RBP20.46■□□□□ 0.87
ITGA3-204ENST00000505306 DDX54Q8TDD1 881 aaKnown RBP20.46■□□□□ 0.87
ITGA3-204ENST00000505306 ZNF692Q9BU19 519 aaPredicted RBP20.46■□□□□ 0.87
ITGA3-204ENST00000505306 CABP1Q9NZU7 370 aa20.46■□□□□ 0.87
ITGA3-204ENST00000505306 FAM177BA6PVY3 158 aa20.46■□□□□ 0.87
ITGA3-204ENST00000505306 HECW1Q76N89 1606 aa20.46■□□□□ 0.87
ITGA3-204ENST00000505306 G3BP1Q13283 466 aaKnown RBP eCLIP20.45■□□□□ 0.86
ITGA3-204ENST00000505306 MTHFSP49914 203 aa20.45■□□□□ 0.86
ITGA3-204ENST00000505306 GAS2L2Q8NHY3 880 aa20.45■□□□□ 0.86
ITGA3-204ENST00000505306 IFIT2P09913 472 aaKnown RBP20.44■□□□□ 0.86
ITGA3-204ENST00000505306 CCDC34Q96HJ3 373 aa20.44■□□□□ 0.86
ITGA3-204ENST00000505306 PRXQ9BXM0 1461 aa20.44■□□□□ 0.86
ITGA3-204ENST00000505306 ZBED9Q6R2W3 1325 aa20.43■□□□□ 0.86
ITGA3-204ENST00000505306 APPP05067 770 aa20.43■□□□□ 0.86
ITGA3-204ENST00000505306 ABCA10Q8WWZ4 1543 aa20.43■□□□□ 0.86
ITGA3-204ENST00000505306 NBPF1Q3BBV0 1214 aa20.42■□□□□ 0.86
ITGA3-204ENST00000505306 RTEL1-TNFRSF6BF6WH68 1400 aa20.42■□□□□ 0.86
ITGA3-204ENST00000505306 DIAPH3Q9NSV4 1193 aa20.42■□□□□ 0.86
ITGA3-204ENST00000505306 COG6Q9Y2V7 657 aa20.42■□□□□ 0.86
ITGA3-204ENST00000505306 SLC4A3P48751 1232 aa20.42■□□□□ 0.86
ITGA3-204ENST00000505306 KIF7Q2M1P5 1343 aa20.41■□□□□ 0.86
ITGA3-204ENST00000505306 RPGRIP1LQ68CZ1 1315 aa20.41■□□□□ 0.86
ITGA3-204ENST00000505306 MAGI1Q96QZ7 1491 aaPredicted RBP20.41■□□□□ 0.86
ITGA3-204ENST00000505306 AMER1Q5JTC6 1135 aaPredicted RBP20.41■□□□□ 0.86
ITGA3-204ENST00000505306 CEBPAP49715 358 aaPredicted RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms