RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 SWT1Q5T5J6 900 aaKnown RBP8.83□□□□□ -1
LINC01088-202ENST00000505149 SLC4A3P48751 1232 aa8.82□□□□□ -1
LINC01088-202ENST00000505149 CCDC102AQ96A19 550 aa8.82□□□□□ -1
LINC01088-202ENST00000505149 PHOX2BQ99453 314 aa8.82□□□□□ -1
LINC01088-202ENST00000505149 DAXXQ9UER7 740 aaPredicted RBP8.81□□□□□ -1
LINC01088-202ENST00000505149 HPS5Q9UPZ3 1129 aa8.81□□□□□ -1
LINC01088-202ENST00000505149 PTPN5P54829 565 aa8.79□□□□□ -1
LINC01088-202ENST00000505149 PPP4CP60510 307 aa8.79□□□□□ -1
LINC01088-202ENST00000505149 WBP1LQ9NX94 342 aa8.79□□□□□ -1
LINC01088-202ENST00000505149 AMHR2Q16671 573 aa8.77□□□□□ -1.01
LINC01088-202ENST00000505149 KRI1Q8N9T8 703 aaKnown RBP8.77□□□□□ -1.01
LINC01088-202ENST00000505149 TMUB1Q9BVT8 246 aa8.77□□□□□ -1.01
LINC01088-202ENST00000505149 IFFO2Q5TF58 517 aa8.76□□□□□ -1.01
LINC01088-202ENST00000505149 AK7Q96M32 723 aa8.76□□□□□ -1.01
LINC01088-202ENST00000505149 PRR14Q9BWN1 585 aa8.76□□□□□ -1.01
LINC01088-202ENST00000505149 SULF1Q8IWU6 871 aa8.75□□□□□ -1.01
LINC01088-202ENST00000505149 ITGBL1O95965 494 aaPredicted RBP8.74□□□□□ -1.01
LINC01088-202ENST00000505149 CLCN1P35523 988 aa8.74□□□□□ -1.01
LINC01088-202ENST00000505149 RSPH4AQ5TD94 716 aa8.74□□□□□ -1.01
LINC01088-202ENST00000505149 SLC10A3P09131 477 aa8.73□□□□□ -1.01
LINC01088-202ENST00000505149 GPCPD1Q9NPB8 672 aa8.73□□□□□ -1.01
LINC01088-202ENST00000505149 TRIM66O15016 1216 aa8.72□□□□□ -1.01
LINC01088-202ENST00000505149 RNF40O75150 1001 aa8.71□□□□□ -1.02
LINC01088-202ENST00000505149 APLP1P51693 650 aa8.71□□□□□ -1.02
LINC01088-202ENST00000505149 ACTN4O43707 911 aaKnown RBP8.7□□□□□ -1.02
LINC01088-202ENST00000505149 MDM2Q00987 491 aaPredicted RBP8.7□□□□□ -1.02
LINC01088-202ENST00000505149 KMT5BQ4FZB7 885 aa8.7□□□□□ -1.02
LINC01088-202ENST00000505149 NLRP7Q8WX94 980 aa8.7□□□□□ -1.02
LINC01088-202ENST00000505149 SLC24A3Q9HC58 644 aa8.7□□□□□ -1.02
LINC01088-202ENST00000505149 CD46P15529 392 aa8.69□□□□□ -1.02
LINC01088-202ENST00000505149 FAM217BQ9NTX9 383 aaPredicted RBP8.69□□□□□ -1.02
LINC01088-202ENST00000505149 CFHP08603 1231 aa8.68□□□□□ -1.02
LINC01088-202ENST00000505149 DDX11L8A8MPP1 907 aa8.67□□□□□ -1.02
LINC01088-202ENST00000505149 GCGRP47871 477 aa8.67□□□□□ -1.02
LINC01088-202ENST00000505149 TJAP1Q5JTD0 557 aa8.67□□□□□ -1.02
LINC01088-202ENST00000505149 REPIN1Q9BWE0 567 aaKnown RBP8.67□□□□□ -1.02
LINC01088-202ENST00000505149 PLA2G2EQ9NZK7 142 aa8.67□□□□□ -1.02
LINC01088-202ENST00000505149 PDE4DQ08499 809 aa8.65□□□□□ -1.02
LINC01088-202ENST00000505149 PARP9Q8IXQ6 854 aa8.65□□□□□ -1.02
LINC01088-202ENST00000505149 RDH13Q8NBN7 331 aa8.65□□□□□ -1.02
LINC01088-202ENST00000505149 IL21Q9HBE4 155 aa8.65□□□□□ -1.02
LINC01088-202ENST00000505149 KCNC4Q03721 635 aa8.64□□□□□ -1.03
LINC01088-202ENST00000505149 GIGYF2Q6Y7W6 1299 aaKnown RBP8.64□□□□□ -1.03
LINC01088-202ENST00000505149 MTRQ99707 1265 aa8.64□□□□□ -1.03
LINC01088-202ENST00000505149 TTLL12Q14166 644 aaPredicted RBP8.63□□□□□ -1.03
LINC01088-202ENST00000505149 PCDHB3Q9Y5E6 796 aa8.63□□□□□ -1.03
LINC01088-202ENST00000505149 SSTR3P32745 418 aaPredicted RBP8.62□□□□□ -1.03
LINC01088-202ENST00000505149 ATP6V1AP38606 617 aa8.61□□□□□ -1.03
LINC01088-202ENST00000505149 USP46P62068 366 aa8.61□□□□□ -1.03
LINC01088-202ENST00000505149 KDM4AO75164 1064 aa8.59□□□□□ -1.03
LINC01088-202ENST00000505149 ZPR1O75312 459 aa8.59□□□□□ -1.03
LINC01088-202ENST00000505149 FUT2Q10981 343 aa8.59□□□□□ -1.03
LINC01088-202ENST00000505149 TPRNQ4KMQ1 711 aa8.59□□□□□ -1.03
LINC01088-202ENST00000505149 GRIPAP1Q4V328 841 aa8.59□□□□□ -1.03
LINC01088-202ENST00000505149 MORN1Q5T089 497 aa8.59□□□□□ -1.03
LINC01088-202ENST00000505149 BLOC1S3Q6QNY0 202 aa8.59□□□□□ -1.03
LINC01088-202ENST00000505149 SALL2Q9Y467 1007 aaPredicted RBP8.59□□□□□ -1.03
LINC01088-202ENST00000505149 NR1I2O75469 434 aa8.58□□□□□ -1.04
LINC01088-202ENST00000505149 A0A0G2JS52 829 aa8.57□□□□□ -1.04
LINC01088-202ENST00000505149 MS4A1P11836 297 aa8.57□□□□□ -1.04
LINC01088-202ENST00000505149 COPS2P61201 443 aa8.56□□□□□ -1.04
LINC01088-202ENST00000505149 DIXDC1Q155Q3 683 aa8.56□□□□□ -1.04
LINC01088-202ENST00000505149 SCUBE3Q8IX30 993 aa8.56□□□□□ -1.04
LINC01088-202ENST00000505149 ZNF516Q92618 1163 aa8.56□□□□□ -1.04
LINC01088-202ENST00000505149 HOXA2O43364 376 aa8.55□□□□□ -1.04
LINC01088-202ENST00000505149 GJA5P36382 358 aa8.55□□□□□ -1.04
LINC01088-202ENST00000505149 BEGAINQ9BUH8 593 aa8.55□□□□□ -1.04
LINC01088-202ENST00000505149 RGS20O76081 388 aa8.54□□□□□ -1.04
LINC01088-202ENST00000505149 THAP11Q96EK4 314 aa8.54□□□□□ -1.04
LINC01088-202ENST00000505149 PUS10Q3MIT2 529 aaKnown RBP8.53□□□□□ -1.04
LINC01088-202ENST00000505149 NUTM1Q86Y26 1132 aa8.53□□□□□ -1.04
LINC01088-202ENST00000505149 SPIRE2Q8WWL2 714 aa8.53□□□□□ -1.04
LINC01088-202ENST00000505149 SLC27A5Q9Y2P5 690 aa8.53□□□□□ -1.04
LINC01088-202ENST00000505149 ADH1BP00325 375 aa8.52□□□□□ -1.05
LINC01088-202ENST00000505149 Q3C1V9 767 aa8.52□□□□□ -1.05
LINC01088-202ENST00000505149 KDM4CQ9H3R0 1056 aa8.52□□□□□ -1.05
LINC01088-202ENST00000505149 BRICD5Q6PL45 260 aa8.5□□□□□ -1.05
LINC01088-202ENST00000505149 NKX2-3Q8TAU0 364 aa8.5□□□□□ -1.05
LINC01088-202ENST00000505149 FMNL1O95466 1100 aaPredicted RBP8.49□□□□□ -1.05
LINC01088-202ENST00000505149 TUSC1Q2TAM9 212 aa8.49□□□□□ -1.05
LINC01088-202ENST00000505149 DDRGK1Q96HY6 314 aa8.49□□□□□ -1.05
LINC01088-202ENST00000505149 TBC1D2Q9BYX2 928 aa8.49□□□□□ -1.05
LINC01088-202ENST00000505149 TLL1O43897 1013 aa8.48□□□□□ -1.05
LINC01088-202ENST00000505149 GGCXP38435 758 aa8.48□□□□□ -1.05
LINC01088-202ENST00000505149 MSS51Q4VC12 460 aa8.48□□□□□ -1.05
LINC01088-202ENST00000505149 SPSB2Q99619 263 aa8.48□□□□□ -1.05
LINC01088-202ENST00000505149 GPBP1L1Q9HC44 474 aaPredicted RBP8.48□□□□□ -1.05
LINC01088-202ENST00000505149 SPTLC1O15269 473 aa8.47□□□□□ -1.05
LINC01088-202ENST00000505149 PPP1R18Q6NYC8 613 aa8.47□□□□□ -1.05
LINC01088-202ENST00000505149 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.47□□□□□ -1.05
LINC01088-202ENST00000505149 MOXD2PA6NHM9 499 aa8.46□□□□□ -1.06
LINC01088-202ENST00000505149 FDX1P10109 184 aa8.46□□□□□ -1.06
LINC01088-202ENST00000505149 BRPF1P55201 1214 aaPredicted RBP8.46□□□□□ -1.06
LINC01088-202ENST00000505149 RSBN1LQ6PCB5 846 aaPredicted RBP8.46□□□□□ -1.06
LINC01088-202ENST00000505149 RSPH6AQ9H0K4 717 aa8.46□□□□□ -1.06
LINC01088-202ENST00000505149 MYSM1Q5VVJ2 828 aa8.45□□□□□ -1.06
LINC01088-202ENST00000505149 RNF19BQ6ZMZ0 732 aa8.45□□□□□ -1.06
LINC01088-202ENST00000505149 FAM160A2Q8N612 972 aaPredicted RBP8.45□□□□□ -1.06
LINC01088-202ENST00000505149 HLA-CQ95604 372 aa8.45□□□□□ -1.06
LINC01088-202ENST00000505149 SLC6A16Q9GZN6 736 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms