RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 LMTK3Q96Q04 1460 aa14.88□□□□□ -0.03
RFC1-210ENST00000505077 ARHGAP23Q9P227 1491 aa14.88□□□□□ -0.03
RFC1-210ENST00000505077 TONSLQ96HA7 1378 aa14.86□□□□□ -0.03
RFC1-210ENST00000505077 RPGRIP1LQ68CZ1 1315 aa14.86□□□□□ -0.03
RFC1-210ENST00000505077 ZFYVE9O95405 1425 aa14.85□□□□□ -0.03
RFC1-210ENST00000505077 STAC3Q96MF2 364 aa14.85□□□□□ -0.03
RFC1-210ENST00000505077 STAG3Q9UJ98 1225 aa14.85□□□□□ -0.03
RFC1-210ENST00000505077 THEMISQ8N1K5 641 aaPredicted RBP14.84□□□□□ -0.03
RFC1-210ENST00000505077 SIN3AQ96ST3 1273 aa14.84□□□□□ -0.03
RFC1-210ENST00000505077 TMEM2Q9UHN6 1383 aa14.84□□□□□ -0.03
RFC1-210ENST00000505077 IQGAP1P46940 1657 aa14.83□□□□□ -0.04
RFC1-210ENST00000505077 NRXN1Q9ULB1 1477 aa14.82□□□□□ -0.04
RFC1-210ENST00000505077 SETD1AO15047 1707 aaKnown RBP14.82□□□□□ -0.04
RFC1-210ENST00000505077 RIMS2Q9UQ26 1411 aa14.82□□□□□ -0.04
RFC1-210ENST00000505077 SCAF11Q99590 1463 aaKnown RBP14.82□□□□□ -0.04
RFC1-210ENST00000505077 DIP2AQ14689 1571 aa14.81□□□□□ -0.04
RFC1-210ENST00000505077 SETBP1Q9Y6X0 1596 aa14.81□□□□□ -0.04
RFC1-210ENST00000505077 TRPM1Q7Z4N2 1603 aa14.81□□□□□ -0.04
RFC1-210ENST00000505077 STRCQ7RTU9 1775 aa14.81□□□□□ -0.04
RFC1-210ENST00000505077 CHGAP10645 457 aaKnown RBP14.81□□□□□ -0.04
RFC1-210ENST00000505077 NEUROD1Q13562 356 aa14.81□□□□□ -0.04
RFC1-210ENST00000505077 NRXN3Q9Y4C0 1643 aa14.81□□□□□ -0.04
RFC1-210ENST00000505077 HDGFP51858 240 aaKnown RBP14.8□□□□□ -0.04
RFC1-210ENST00000505077 ZNF326Q5BKZ1 582 aaKnown RBP14.8□□□□□ -0.04
RFC1-210ENST00000505077 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.8□□□□□ -0.04
RFC1-210ENST00000505077 MED14O60244 1454 aa14.78□□□□□ -0.04
RFC1-210ENST00000505077 PIK3C2GO75747 1445 aa14.78□□□□□ -0.04
RFC1-210ENST00000505077 RGL3Q3MIN7 710 aa14.77□□□□□ -0.05
RFC1-210ENST00000505077 PRAG1Q86YV5 1406 aa14.76□□□□□ -0.05
RFC1-210ENST00000505077 VGFO15240 615 aaPredicted RBP14.76□□□□□ -0.05
RFC1-210ENST00000505077 ZEB1P37275 1124 aaPredicted RBP14.76□□□□□ -0.05
RFC1-210ENST00000505077 L3MBTL2Q969R5 705 aa14.76□□□□□ -0.05
RFC1-210ENST00000505077 EID1Q9Y6B2 187 aa14.76□□□□□ -0.05
RFC1-210ENST00000505077 PLEKHG1Q9ULL1 1385 aa14.75□□□□□ -0.05
RFC1-210ENST00000505077 KNDC1Q76NI1 1749 aa14.75□□□□□ -0.05
RFC1-210ENST00000505077 DCAF11Q8TEB1 546 aa14.74□□□□□ -0.05
RFC1-210ENST00000505077 CHD2O14647 1828 aaKnown RBP14.73□□□□□ -0.05
RFC1-210ENST00000505077 PPP1R15AO75807 674 aaPredicted RBP14.73□□□□□ -0.05
RFC1-210ENST00000505077 ANKLE2Q86XL3 938 aa14.73□□□□□ -0.05
RFC1-210ENST00000505077 RALGAPBQ86X10 1494 aa14.73□□□□□ -0.05
RFC1-210ENST00000505077 ALKQ9UM73 1620 aa14.73□□□□□ -0.05
RFC1-210ENST00000505077 TXNDC2Q86VQ3 553 aa14.71□□□□□ -0.05
RFC1-210ENST00000505077 NPHP4O75161 1426 aaPredicted RBP14.7□□□□□ -0.06
RFC1-210ENST00000505077 LTKP29376 864 aa14.69□□□□□ -0.06
RFC1-210ENST00000505077 XRN1Q8IZH2 1706 aaKnown RBP14.69□□□□□ -0.06
RFC1-210ENST00000505077 ADGRB1O14514 1584 aa14.68□□□□□ -0.06
RFC1-210ENST00000505077 ADGRF5Q8IZF2 1346 aa14.68□□□□□ -0.06
RFC1-210ENST00000505077 ARHGEF28Q8N1W1 1705 aaKnown RBP14.68□□□□□ -0.06
RFC1-210ENST00000505077 NWD1Q149M9 1564 aa14.68□□□□□ -0.06
RFC1-210ENST00000505077 ADAMTS13Q76LX8 1427 aa14.67□□□□□ -0.06
RFC1-210ENST00000505077 ASXL1Q8IXJ9 1541 aa14.67□□□□□ -0.06
RFC1-210ENST00000505077 NPM3O75607 178 aaKnown RBP14.67□□□□□ -0.06
RFC1-210ENST00000505077 GPRASP1Q5JY77 1395 aa14.66□□□□□ -0.06
RFC1-210ENST00000505077 PIK3R4Q99570 1358 aa14.66□□□□□ -0.06
RFC1-210ENST00000505077 HSPA2P54652 639 aa14.66□□□□□ -0.06
RFC1-210ENST00000505077 KDM2AQ9Y2K7 1162 aa14.66□□□□□ -0.06
RFC1-210ENST00000505077 CPS1P31327 1500 aa14.65□□□□□ -0.06
RFC1-210ENST00000505077 NUTM2DQ5VT03 806 aaPredicted RBP14.64□□□□□ -0.07
RFC1-210ENST00000505077 C14orf93Q9H972 538 aaKnown RBP14.64□□□□□ -0.07
RFC1-210ENST00000505077 DLC1Q96QB1 1528 aa14.63□□□□□ -0.07
RFC1-210ENST00000505077 PIAS4Q8N2W9 510 aaPredicted RBP14.63□□□□□ -0.07
RFC1-210ENST00000505077 DMRT2Q9Y5R5 561 aa14.63□□□□□ -0.07
RFC1-210ENST00000505077 ROCK2O75116 1388 aaKnown RBP14.62□□□□□ -0.07
RFC1-210ENST00000505077 TBX22Q9Y458 520 aa14.62□□□□□ -0.07
RFC1-210ENST00000505077 STRCP1A6NGW2 1772 aa14.62□□□□□ -0.07
RFC1-210ENST00000505077 NCKAP5LQ9HCH0 1330 aa14.62□□□□□ -0.07
RFC1-210ENST00000505077 TECPR2O15040 1411 aa14.61□□□□□ -0.07
RFC1-210ENST00000505077 NBPF8Q3BBV2 869 aa14.61□□□□□ -0.07
RFC1-210ENST00000505077 NKTRP30414 1462 aaKnown RBP14.61□□□□□ -0.07
RFC1-210ENST00000505077 QRICH2Q9H0J4 1663 aa14.61□□□□□ -0.07
RFC1-210ENST00000505077 BCANQ96GW7 911 aa14.6□□□□□ -0.07
RFC1-210ENST00000505077 PTCH1Q13635 1447 aa14.59□□□□□ -0.07
RFC1-210ENST00000505077 YTHDC2Q9H6S0 1430 aaKnown RBP14.59□□□□□ -0.07
RFC1-210ENST00000505077 EIF3AQ14152 1382 aaKnown RBP14.59□□□□□ -0.07
RFC1-210ENST00000505077 CFAP70Q5T0N1 1121 aa14.58□□□□□ -0.08
RFC1-210ENST00000505077 LRPPRCP42704 1394 aaKnown RBP14.58□□□□□ -0.08
RFC1-210ENST00000505077 METP08581 1390 aa14.57□□□□□ -0.08
RFC1-210ENST00000505077 XIRP1Q702N8 1843 aaKnown RBP14.57□□□□□ -0.08
RFC1-210ENST00000505077 ABCC11Q96J66 1382 aa14.56□□□□□ -0.08
RFC1-210ENST00000505077 FAM135BQ49AJ0 1406 aa14.56□□□□□ -0.08
RFC1-210ENST00000505077 SLC26A8Q96RN1 970 aa14.55□□□□□ -0.08
RFC1-210ENST00000505077 ADGRB2O60241 1585 aa14.55□□□□□ -0.08
RFC1-210ENST00000505077 NALCNQ8IZF0 1738 aa14.55□□□□□ -0.08
RFC1-210ENST00000505077 CARD11Q9BXL7 1154 aa14.54□□□□□ -0.08
RFC1-210ENST00000505077 PTPRUQ92729 1446 aa14.53□□□□□ -0.08
RFC1-210ENST00000505077 USP47Q96K76 1375 aa14.53□□□□□ -0.08
RFC1-210ENST00000505077 NBPF1Q3BBV0 1214 aa14.52□□□□□ -0.09
RFC1-210ENST00000505077 SBNO2Q9Y2G9 1366 aa14.51□□□□□ -0.09
RFC1-210ENST00000505077 ZBTB22O15209 634 aa14.51□□□□□ -0.09
RFC1-210ENST00000505077 SIRT1Q96EB6 747 aa14.51□□□□□ -0.09
RFC1-210ENST00000505077 KCNA6P17658 529 aa14.5□□□□□ -0.09
RFC1-210ENST00000505077 TMEM132EQ6IEE7 984 aa14.5□□□□□ -0.09
RFC1-210ENST00000505077 ITSN1Q15811 1721 aa14.49□□□□□ -0.09
RFC1-210ENST00000505077 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.49□□□□□ -0.09
RFC1-210ENST00000505077 CDC42BPGQ6DT37 1551 aa14.49□□□□□ -0.09
RFC1-210ENST00000505077 NCOA3Q9Y6Q9 1424 aa14.49□□□□□ -0.09
RFC1-210ENST00000505077 LTBP4Q8N2S1 1624 aa14.48□□□□□ -0.09
RFC1-210ENST00000505077 AMOTL2Q9Y2J4 779 aa14.48□□□□□ -0.09
RFC1-210ENST00000505077 ROBO2Q9HCK4 1378 aa14.47□□□□□ -0.09
RFC1-210ENST00000505077 FMN2Q9NZ56 1722 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms