RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 ARID4BQ4LE39 1312 aaPredicted RBP12.38□□□□□ -0.43
CDC42SE2-208ENST00000505065 PKD2Q13563 968 aa12.37□□□□□ -0.43
CDC42SE2-208ENST00000505065 TMEM2Q9UHN6 1383 aa12.37□□□□□ -0.43
CDC42SE2-208ENST00000505065 CPS1P31327 1500 aa12.37□□□□□ -0.43
CDC42SE2-208ENST00000505065 SCAF11Q99590 1463 aaKnown RBP12.37□□□□□ -0.43
CDC42SE2-208ENST00000505065 ALKQ9UM73 1620 aa12.37□□□□□ -0.43
CDC42SE2-208ENST00000505065 CCDC144AA2RUR9 1427 aa12.36□□□□□ -0.43
CDC42SE2-208ENST00000505065 LTBP4Q8N2S1 1624 aa12.35□□□□□ -0.43
CDC42SE2-208ENST00000505065 PLEKHG1Q9ULL1 1385 aa12.35□□□□□ -0.43
CDC42SE2-208ENST00000505065 ADAMTS13Q76LX8 1427 aa12.34□□□□□ -0.43
CDC42SE2-208ENST00000505065 DLC1Q96QB1 1528 aa12.34□□□□□ -0.43
CDC42SE2-208ENST00000505065 SLC4A1APQ9BWU0 796 aaKnown RBP12.34□□□□□ -0.43
CDC42SE2-208ENST00000505065 RPGRIP1LQ68CZ1 1315 aa12.34□□□□□ -0.43
CDC42SE2-208ENST00000505065 ADGRB2O60241 1585 aa12.34□□□□□ -0.43
CDC42SE2-208ENST00000505065 MYT1LQ9UL68 1186 aa12.34□□□□□ -0.43
CDC42SE2-208ENST00000505065 IDI1Q13907 227 aa12.33□□□□□ -0.44
CDC42SE2-208ENST00000505065 CEBPAP49715 358 aaPredicted RBP12.33□□□□□ -0.44
CDC42SE2-208ENST00000505065 RIMS2Q9UQ26 1411 aa12.32□□□□□ -0.44
CDC42SE2-208ENST00000505065 TECPR2O15040 1411 aa12.32□□□□□ -0.44
CDC42SE2-208ENST00000505065 MLECQ14165 292 aa12.32□□□□□ -0.44
CDC42SE2-208ENST00000505065 STAC3Q96MF2 364 aa12.31□□□□□ -0.44
CDC42SE2-208ENST00000505065 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.3□□□□□ -0.441e-6■■■□□ 18.6
CDC42SE2-208ENST00000505065 IQSEC2Q5JU85 1478 aa12.3□□□□□ -0.44
CDC42SE2-208ENST00000505065 RALGAPBQ86X10 1494 aa12.29□□□□□ -0.44
CDC42SE2-208ENST00000505065 NALCNQ8IZF0 1738 aa12.29□□□□□ -0.44
CDC42SE2-208ENST00000505065 GPRASP1Q5JY77 1395 aa12.28□□□□□ -0.44
CDC42SE2-208ENST00000505065 PIK3R4Q99570 1358 aa12.28□□□□□ -0.44
CDC42SE2-208ENST00000505065 NKTRP30414 1462 aaKnown RBP12.28□□□□□ -0.44
CDC42SE2-208ENST00000505065 TIMELESSQ9UNS1 1208 aa12.28□□□□□ -0.44
CDC42SE2-208ENST00000505065 TOPAZ1Q8N9V7 1692 aa12.27□□□□□ -0.44
CDC42SE2-208ENST00000505065 PCGF6Q9BYE7 350 aa12.27□□□□□ -0.45
CDC42SE2-208ENST00000505065 NPHP4O75161 1426 aaPredicted RBP12.27□□□□□ -0.45
CDC42SE2-208ENST00000505065 PTCH1Q13635 1447 aa12.25□□□□□ -0.45
CDC42SE2-208ENST00000505065 TRIM52Q96A61 297 aa12.25□□□□□ -0.45
CDC42SE2-208ENST00000505065 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.25□□□□□ -0.45
CDC42SE2-208ENST00000505065 FOXD1Q16676 465 aa12.25□□□□□ -0.45
CDC42SE2-208ENST00000505065 QRICH2Q9H0J4 1663 aa12.24□□□□□ -0.45
CDC42SE2-208ENST00000505065 ESF1Q9H501 851 aaKnown RBP12.24□□□□□ -0.45
CDC42SE2-208ENST00000505065 FMN2Q9NZ56 1722 aa12.23□□□□□ -0.45
CDC42SE2-208ENST00000505065 PTPRUQ92729 1446 aa12.23□□□□□ -0.45
CDC42SE2-208ENST00000505065 THEMISQ8N1K5 641 aaPredicted RBP12.23□□□□□ -0.45
CDC42SE2-208ENST00000505065 NCOA3Q9Y6Q9 1424 aa12.22□□□□□ -0.45
CDC42SE2-208ENST00000505065 LTKP29376 864 aa12.22□□□□□ -0.45
CDC42SE2-208ENST00000505065 USP32Q8NFA0 1604 aa12.21□□□□□ -0.46
CDC42SE2-208ENST00000505065 CDC42BPGQ6DT37 1551 aa12.21□□□□□ -0.46
CDC42SE2-208ENST00000505065 USP54Q70EL1 1684 aa12.2□□□□□ -0.46
CDC42SE2-208ENST00000505065 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.2□□□□□ -0.46
CDC42SE2-208ENST00000505065 FAM135BQ49AJ0 1406 aa12.19□□□□□ -0.46
CDC42SE2-208ENST00000505065 MYOM1P52179 1685 aa12.18□□□□□ -0.46
CDC42SE2-208ENST00000505065 ITSN1Q15811 1721 aa12.17□□□□□ -0.46
CDC42SE2-208ENST00000505065 LRRC7Q96NW7 1537 aa12.17□□□□□ -0.46
CDC42SE2-208ENST00000505065 C14orf93Q9H972 538 aaKnown RBP12.16□□□□□ -0.46
CDC42SE2-208ENST00000505065 SIRT1Q96EB6 747 aa12.16□□□□□ -0.46
CDC42SE2-208ENST00000505065 TBX22Q9Y458 520 aa12.16□□□□□ -0.46
CDC42SE2-208ENST00000505065 ADGRF5Q8IZF2 1346 aa12.16□□□□□ -0.46
CDC42SE2-208ENST00000505065 AKAP12Q02952 1782 aa12.16□□□□□ -0.46
CDC42SE2-208ENST00000505065 LRPPRCP42704 1394 aaKnown RBP12.15□□□□□ -0.46
CDC42SE2-208ENST00000505065 ABCC11Q96J66 1382 aa12.15□□□□□ -0.46
CDC42SE2-208ENST00000505065 NHSL1Q5SYE7 1610 aa12.14□□□□□ -0.47
CDC42SE2-208ENST00000505065 METP08581 1390 aa12.14□□□□□ -0.47
CDC42SE2-208ENST00000505065 DCCP43146 1447 aa12.14□□□□□ -0.47
CDC42SE2-208ENST00000505065 NRKQ7Z2Y5 1582 aa12.13□□□□□ -0.47
CDC42SE2-208ENST00000505065 SIN3AQ96ST3 1273 aa12.13□□□□□ -0.47
CDC42SE2-208ENST00000505065 SBNO2Q9Y2G9 1366 aa12.13□□□□□ -0.47
CDC42SE2-208ENST00000505065 YTHDC2Q9H6S0 1430 aaKnown RBP12.13□□□□□ -0.47
CDC42SE2-208ENST00000505065 CRYBG1Q9Y4K1 1723 aa12.13□□□□□ -0.47
CDC42SE2-208ENST00000505065 ANKLE2Q86XL3 938 aa12.13□□□□□ -0.47
CDC42SE2-208ENST00000505065 RGPD8O14715 1765 aaPredicted RBP12.12□□□□□ -0.47
CDC42SE2-208ENST00000505065 VGFO15240 615 aaPredicted RBP12.12□□□□□ -0.47
CDC42SE2-208ENST00000505065 L3MBTL2Q969R5 705 aa12.12□□□□□ -0.47
CDC42SE2-208ENST00000505065 MARF1Q9Y4F3 1742 aaKnown RBP12.12□□□□□ -0.47
CDC42SE2-208ENST00000505065 KIF1AQ12756 1690 aa12.11□□□□□ -0.47
CDC42SE2-208ENST00000505065 NCKAP5LQ9HCH0 1330 aa12.11□□□□□ -0.47
CDC42SE2-208ENST00000505065 MON2Q7Z3U7 1717 aa12.11□□□□□ -0.47
CDC42SE2-208ENST00000505065 TULP4Q9NRJ4 1543 aa12.1□□□□□ -0.47
CDC42SE2-208ENST00000505065 TRPM3Q9HCF6 1732 aaPredicted RBP12.1□□□□□ -0.47
CDC42SE2-208ENST00000505065 HDGFP51858 240 aaKnown RBP12.1□□□□□ -0.47
CDC42SE2-208ENST00000505065 PPP1R15AO75807 674 aaPredicted RBP12.09□□□□□ -0.47
CDC42SE2-208ENST00000505065 NBPF8Q3BBV2 869 aa12.09□□□□□ -0.47
CDC42SE2-208ENST00000505065 TXNDC2Q86VQ3 553 aa12.08□□□□□ -0.48
CDC42SE2-208ENST00000505065 DMRT2Q9Y5R5 561 aa12.08□□□□□ -0.48
CDC42SE2-208ENST00000505065 HSPA2P54652 639 aa12.07□□□□□ -0.48
CDC42SE2-208ENST00000505065 ADGRL3Q9HAR2 1447 aa12.06□□□□□ -0.48
CDC42SE2-208ENST00000505065 EID1Q9Y6B2 187 aa12.06□□□□□ -0.48
CDC42SE2-208ENST00000505065 AHDC1Q5TGY3 1603 aaPredicted RBP12.06□□□□□ -0.48
CDC42SE2-208ENST00000505065 ROBO2Q9HCK4 1378 aa12.06□□□□□ -0.48
CDC42SE2-208ENST00000505065 KCNA6P17658 529 aa12.05□□□□□ -0.48
CDC42SE2-208ENST00000505065 COL22A1Q8NFW1 1626 aaPredicted RBP12.05□□□□□ -0.48
CDC42SE2-208ENST00000505065 TONSLQ96HA7 1378 aa12.05□□□□□ -0.48
CDC42SE2-208ENST00000505065 ABCA3Q99758 1704 aa12.05□□□□□ -0.48
CDC42SE2-208ENST00000505065 MST1RQ04912 1400 aa12.05□□□□□ -0.48
CDC42SE2-208ENST00000505065 ALS2Q96Q42 1657 aa12.05□□□□□ -0.48
CDC42SE2-208ENST00000505065 ANKRD26Q9UPS8 1709 aa12.04□□□□□ -0.48
CDC42SE2-208ENST00000505065 DCAF11Q8TEB1 546 aa12.02□□□□□ -0.49
CDC42SE2-208ENST00000505065 ANKARQ7Z5J8 1434 aa12.02□□□□□ -0.49
CDC42SE2-208ENST00000505065 ROBO1Q9Y6N7 1651 aa12.01□□□□□ -0.49
CDC42SE2-208ENST00000505065 SHPRHQ149N8 1683 aa12.01□□□□□ -0.49
CDC42SE2-208ENST00000505065 ATP7BP35670 1465 aa12.01□□□□□ -0.49
CDC42SE2-208ENST00000505065 COL16A1Q07092 1604 aaPredicted RBP12□□□□□ -0.49
CDC42SE2-208ENST00000505065 MED1Q15648 1581 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms