RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 P3H3Q8IVL6 736 aa8.17□□□□□ -1.1
CDH9-203ENST00000505045 COL17A1Q9UMD9 1497 aaPredicted RBP8.16□□□□□ -1.1
CDH9-203ENST00000505045 FHOD3Q2V2M9 1422 aa8.16□□□□□ -1.1
CDH9-203ENST00000505045 PTPN5P54829 565 aa8.16□□□□□ -1.1
CDH9-203ENST00000505045 ARID3CA6NKF2 412 aa8.15□□□□□ -1.1
CDH9-203ENST00000505045 LAPTM4AQ15012 233 aa8.15□□□□□ -1.1
CDH9-203ENST00000505045 PPP1R15BQ5SWA1 713 aa8.15□□□□□ -1.1
CDH9-203ENST00000505045 ZNF775Q96BV0 537 aaPredicted RBP8.15□□□□□ -1.1
CDH9-203ENST00000505045 CFAP43Q8NDM7 1665 aa8.15□□□□□ -1.1
CDH9-203ENST00000505045 OXER1Q8TDS5 423 aa8.15□□□□□ -1.11
CDH9-203ENST00000505045 LHX6Q9UPM6 363 aa8.15□□□□□ -1.11
CDH9-203ENST00000505045 ATP10BO94823 1461 aa8.14□□□□□ -1.11
CDH9-203ENST00000505045 NUP153P49790 1475 aaKnown RBP8.14□□□□□ -1.11
CDH9-203ENST00000505045 RANGAP1P46060 587 aaPredicted RBP8.14□□□□□ -1.11
CDH9-203ENST00000505045 EFCAB5A4FU69 1503 aa8.13□□□□□ -1.11
CDH9-203ENST00000505045 TK2O00142 265 aa8.13□□□□□ -1.11
CDH9-203ENST00000505045 ABCA9Q8IUA7 1624 aa8.12□□□□□ -1.11
CDH9-203ENST00000505045 LARP6Q9BRS8 491 aaKnown RBP8.12□□□□□ -1.11
CDH9-203ENST00000505045 ARHGAP33O14559 1287 aa8.11□□□□□ -1.11
CDH9-203ENST00000505045 LRRIQ1Q96JM4 1722 aa8.11□□□□□ -1.11
CDH9-203ENST00000505045 TEX14Q8IWB6 1497 aa8.1□□□□□ -1.11
CDH9-203ENST00000505045 ZNF787Q6DD87 383 aa8.1□□□□□ -1.11
CDH9-203ENST00000505045 SPRYD3Q8NCJ5 442 aa8.1□□□□□ -1.11
CDH9-203ENST00000505045 DDX27Q96GQ7 796 aaKnown RBP8.1□□□□□ -1.11
CDH9-203ENST00000505045 CDK13Q14004 1512 aaKnown RBP8.1□□□□□ -1.11
CDH9-203ENST00000505045 MAGI3Q5TCQ9 1506 aa8.1□□□□□ -1.11
CDH9-203ENST00000505045 ARHGAP35Q9NRY4 1499 aa8.09□□□□□ -1.11
CDH9-203ENST00000505045 TBC1D12O60347 775 aa8.09□□□□□ -1.11
CDH9-203ENST00000505045 CD109Q6YHK3 1445 aa8.09□□□□□ -1.11
CDH9-203ENST00000505045 KCNH8Q96L42 1107 aa8.08□□□□□ -1.12
CDH9-203ENST00000505045 STAC3Q96MF2 364 aa8.08□□□□□ -1.12
CDH9-203ENST00000505045 TTC37Q6PGP7 1564 aa8.08□□□□□ -1.12
CDH9-203ENST00000505045 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.08□□□□□ -1.12
CDH9-203ENST00000505045 FRMPD1Q5SYB0 1578 aa8.07□□□□□ -1.12
CDH9-203ENST00000505045 UPF1Q92900 1129 aaKnown RBP eCLIP8.06□□□□□ -1.12
CDH9-203ENST00000505045 EMILIN3Q9NT22 766 aa8.06□□□□□ -1.12
CDH9-203ENST00000505045 ADGRL1O94910 1474 aa8.06□□□□□ -1.12
CDH9-203ENST00000505045 PSDA5PKW4 1024 aaPredicted RBP8.06□□□□□ -1.12
CDH9-203ENST00000505045 CAMK2BQ13554 666 aa8.06□□□□□ -1.12
CDH9-203ENST00000505045 ANO8Q9HCE9 1232 aaPredicted RBP8.06□□□□□ -1.12
CDH9-203ENST00000505045 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.05□□□□□ -1.12
CDH9-203ENST00000505045 PCF11O94913 1555 aaKnown RBP8.05□□□□□ -1.12
CDH9-203ENST00000505045 HECW1Q76N89 1606 aa8.05□□□□□ -1.12
CDH9-203ENST00000505045 KIF14Q15058 1648 aa8.04□□□□□ -1.12
CDH9-203ENST00000505045 GFRA3O60609 400 aa8.04□□□□□ -1.12
CDH9-203ENST00000505045 PAXIP1Q6ZW49 1069 aaPredicted RBP8.04□□□□□ -1.12
CDH9-203ENST00000505045 UBTFP17480 764 aaKnown RBP8.03□□□□□ -1.12
CDH9-203ENST00000505045 DMRTA1Q5VZB9 504 aa8.03□□□□□ -1.12
CDH9-203ENST00000505045 ARAP3Q8WWN8 1544 aa8.03□□□□□ -1.12
CDH9-203ENST00000505045 RICTORQ6R327 1708 aa8.03□□□□□ -1.12
CDH9-203ENST00000505045 SIGLEC1Q9BZZ2 1709 aa8.01□□□□□ -1.13
CDH9-203ENST00000505045 CFAP44Q96MT7 982 aa8.01□□□□□ -1.13
CDH9-203ENST00000505045 NEO1Q92859 1461 aa8.01□□□□□ -1.13
CDH9-203ENST00000505045 FMN1Q68DA7 1419 aa8.01□□□□□ -1.13
CDH9-203ENST00000505045 EVI5O60447 810 aa8.01□□□□□ -1.13
CDH9-203ENST00000505045 MYO5CQ9NQX4 1742 aa8□□□□□ -1.13
CDH9-203ENST00000505045 FOSBP53539 338 aa8□□□□□ -1.13
CDH9-203ENST00000505045 PPP4R3BQ5MIZ7 849 aa7.99□□□□□ -1.13
CDH9-203ENST00000505045 CFAP74Q9C0B2 1584 aa7.99□□□□□ -1.13
CDH9-203ENST00000505045 ARHGEF40Q8TER5 1519 aa7.99□□□□□ -1.13
CDH9-203ENST00000505045 FANCAO15360 1455 aa7.99□□□□□ -1.13
CDH9-203ENST00000505045 RAPGEF3O95398 923 aa7.98□□□□□ -1.13
CDH9-203ENST00000505045 PSEN2P49810 448 aa7.98□□□□□ -1.13
CDH9-203ENST00000505045 MAP3K9P80192 1104 aa7.98□□□□□ -1.13
CDH9-203ENST00000505045 CDC42BPBQ9Y5S2 1711 aa7.97□□□□□ -1.13
CDH9-203ENST00000505045 ZMYM4Q5VZL5 1548 aa7.97□□□□□ -1.13
CDH9-203ENST00000505045 PLEKHD1A6NEE1 506 aa7.96□□□□□ -1.13
CDH9-203ENST00000505045 THSD4Q6ZMP0 1018 aa7.96□□□□□ -1.13
CDH9-203ENST00000505045 ADAMTSL3P82987 1691 aa7.96□□□□□ -1.14
CDH9-203ENST00000505045 CLIP1P30622 1438 aa7.96□□□□□ -1.14
CDH9-203ENST00000505045 TROQ12816 1431 aaPredicted RBP7.96□□□□□ -1.14
CDH9-203ENST00000505045 BCORL1Q5H9F3 1711 aa7.96□□□□□ -1.14
CDH9-203ENST00000505045 AKNAQ7Z591 1439 aa7.96□□□□□ -1.14
CDH9-203ENST00000505045 ZNF454Q8N9F8 522 aa7.96□□□□□ -1.14
CDH9-203ENST00000505045 CASKIN1Q8WXD9 1431 aa7.96□□□□□ -1.14
CDH9-203ENST00000505045 PREX2Q70Z35 1606 aa7.95□□□□□ -1.14
CDH9-203ENST00000505045 MADDQ8WXG6 1647 aa7.95□□□□□ -1.14
CDH9-203ENST00000505045 FYCO1Q9BQS8 1478 aa7.95□□□□□ -1.14
CDH9-203ENST00000505045 CDC42BPAQ5VT25 1732 aa7.95□□□□□ -1.14
CDH9-203ENST00000505045 BCL2L12Q9HB09 334 aa7.95□□□□□ -1.14
CDH9-203ENST00000505045 ATP1B4Q9UN42 357 aaPredicted RBP7.95□□□□□ -1.14
CDH9-203ENST00000505045 DENND4BO75064 1496 aaPredicted RBP7.95□□□□□ -1.14
CDH9-203ENST00000505045 YEATS2Q9ULM3 1422 aa7.94□□□□□ -1.14
CDH9-203ENST00000505045 PHLDB1Q86UU1 1377 aa7.94□□□□□ -1.14
CDH9-203ENST00000505045 HECW2Q9P2P5 1572 aa7.94□□□□□ -1.14
CDH9-203ENST00000505045 PLCH2O75038 1416 aa7.94□□□□□ -1.14
CDH9-203ENST00000505045 POGZQ7Z3K3 1410 aa7.94□□□□□ -1.14
CDH9-203ENST00000505045 CCDC18Q5T9S5 1454 aa7.94□□□□□ -1.14
CDH9-203ENST00000505045 ARHGAP5Q13017 1502 aa7.93□□□□□ -1.14
CDH9-203ENST00000505045 DPYSL4O14531 572 aa7.93□□□□□ -1.14
CDH9-203ENST00000505045 ZFYVE16Q7Z3T8 1539 aa7.93□□□□□ -1.14
CDH9-203ENST00000505045 ARIH1Q9Y4X5 557 aaPredicted RBP7.92□□□□□ -1.14
CDH9-203ENST00000505045 PCDHGA10Q9Y5H3 936 aa7.92□□□□□ -1.14
CDH9-203ENST00000505045 RIMS1Q86UR5 1692 aaKnown RBP7.92□□□□□ -1.14
CDH9-203ENST00000505045 ITSN2Q9NZM3 1697 aa7.92□□□□□ -1.14
CDH9-203ENST00000505045 KDM5CP41229 1560 aa7.92□□□□□ -1.14
CDH9-203ENST00000505045 ZDHHC16Q969W1 377 aa7.92□□□□□ -1.14
CDH9-203ENST00000505045 ABCC1P33527 1531 aa7.91□□□□□ -1.14
CDH9-203ENST00000505045 CEP162Q5TB80 1403 aa7.91□□□□□ -1.14
CDH9-203ENST00000505045 ABCA6Q8N139 1617 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms