RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 ZBTB12Q9Y330 459 aaPredicted RBP9.66□□□□□ -0.86
CDH9-202ENST00000505020 ERCC3P19447 782 aa9.66□□□□□ -0.86
CDH9-202ENST00000505020 DNAJC14Q6Y2X3 702 aaPredicted RBP9.66□□□□□ -0.86
CDH9-202ENST00000505020 VTI1AQ96AJ9 217 aa9.66□□□□□ -0.86
CDH9-202ENST00000505020 GDPD2Q9HCC8 539 aa9.66□□□□□ -0.86
CDH9-202ENST00000505020 METTL14Q9HCE5 456 aaKnown RBP9.66□□□□□ -0.86
CDH9-202ENST00000505020 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.66□□□□□ -0.86
CDH9-202ENST00000505020 HMGB1P1B2RPK0 211 aaPredicted RBP9.65□□□□□ -0.86
CDH9-202ENST00000505020 PTMAP06454 111 aaKnown RBP9.65□□□□□ -0.86
CDH9-202ENST00000505020 MFSD10Q14728 455 aa9.65□□□□□ -0.86
CDH9-202ENST00000505020 SBNO2Q9Y2G9 1366 aa9.65□□□□□ -0.87
CDH9-202ENST00000505020 SRPK2P78362 688 aaKnown RBP9.63□□□□□ -0.87
CDH9-202ENST00000505020 SMC5Q8IY18 1101 aa9.63□□□□□ -0.87
CDH9-202ENST00000505020 BCL2L13Q9BXK5 485 aa9.63□□□□□ -0.87
CDH9-202ENST00000505020 MAGEC2Q9UBF1 373 aaPredicted RBP9.63□□□□□ -0.87
CDH9-202ENST00000505020 PPFIA4O75335 1185 aa9.63□□□□□ -0.87
CDH9-202ENST00000505020 PDE4AP27815 886 aa9.63□□□□□ -0.87
CDH9-202ENST00000505020 CAMK2BQ13554 666 aa9.63□□□□□ -0.87
CDH9-202ENST00000505020 REPIN1Q9BWE0 567 aaKnown RBP9.63□□□□□ -0.87
CDH9-202ENST00000505020 PARNO95453 639 aaKnown RBP9.62□□□□□ -0.87
CDH9-202ENST00000505020 SECISBP2LQ93073 1101 aaKnown RBP9.62□□□□□ -0.87
CDH9-202ENST00000505020 DDX27Q96GQ7 796 aaKnown RBP9.62□□□□□ -0.87
CDH9-202ENST00000505020 GNEQ9Y223 722 aaKnown RBP9.62□□□□□ -0.87
CDH9-202ENST00000505020 LONRF3Q496Y0 759 aa9.61□□□□□ -0.87
CDH9-202ENST00000505020 GIPC2Q8TF65 315 aa9.61□□□□□ -0.87
CDH9-202ENST00000505020 CREB3O43889 395 aa9.6□□□□□ -0.87
CDH9-202ENST00000505020 CFAP70Q5T0N1 1121 aa9.6□□□□□ -0.87
CDH9-202ENST00000505020 LARGE2Q8N3Y3 721 aa9.6□□□□□ -0.87
CDH9-202ENST00000505020 FECHP22830 423 aa9.59□□□□□ -0.87
CDH9-202ENST00000505020 FOXD4Q12950 439 aaPredicted RBP9.59□□□□□ -0.87
CDH9-202ENST00000505020 NOM1Q5C9Z4 860 aaKnown RBP9.59□□□□□ -0.87
CDH9-202ENST00000505020 POLR3EQ9NVU0 708 aa9.59□□□□□ -0.87
CDH9-202ENST00000505020 KCNG1Q9UIX4 513 aa9.59□□□□□ -0.87
CDH9-202ENST00000505020 ZNF467Q7Z7K2 595 aaPredicted RBP9.59□□□□□ -0.88
CDH9-202ENST00000505020 NOP9Q86U38 636 aaKnown RBP9.59□□□□□ -0.88
CDH9-202ENST00000505020 TMA7Q9Y2S6 64 aaKnown RBP9.59□□□□□ -0.88
CDH9-202ENST00000505020 CCDC194A0A1B0GVG4 234 aa9.58□□□□□ -0.88
CDH9-202ENST00000505020 TMEM88BA6NKF7 163 aa9.58□□□□□ -0.88
CDH9-202ENST00000505020 ABL2P42684 1182 aa9.58□□□□□ -0.88
CDH9-202ENST00000505020 RASEFQ8IZ41 740 aa9.58□□□□□ -0.88
CDH9-202ENST00000505020 TBC1D2Q9BYX2 928 aa9.58□□□□□ -0.88
CDH9-202ENST00000505020 NUTM2FA1L443 756 aa9.57□□□□□ -0.88
CDH9-202ENST00000505020 IGBP1P78318 339 aa9.57□□□□□ -0.88
CDH9-202ENST00000505020 PMM1Q92871 262 aa9.57□□□□□ -0.88
CDH9-202ENST00000505020 NAP1L2Q9ULW6 460 aaPredicted RBP9.57□□□□□ -0.88
CDH9-202ENST00000505020 PIP4P2Q8N4L2 257 aa9.56□□□□□ -0.88
CDH9-202ENST00000505020 hCG_2014768A0A024R1R8 64 aa9.56□□□□□ -0.88
CDH9-202ENST00000505020 PSME1Q06323 249 aa9.56□□□□□ -0.88
CDH9-202ENST00000505020 MTA3Q9BTC8 594 aa9.56□□□□□ -0.88
CDH9-202ENST00000505020 RPS6KL1Q9Y6S9 549 aa9.56□□□□□ -0.88
CDH9-202ENST00000505020 ZFYVE27Q5T4F4 411 aa9.55□□□□□ -0.88
CDH9-202ENST00000505020 OSCARQ8IYS5 282 aa9.55□□□□□ -0.88
CDH9-202ENST00000505020 PNMA2Q9UL42 364 aa9.55□□□□□ -0.88
CDH9-202ENST00000505020 GNPATO15228 680 aa9.54□□□□□ -0.88
CDH9-202ENST00000505020 SH3BP5O60239 455 aa9.54□□□□□ -0.88
CDH9-202ENST00000505020 EIF3JO75822 258 aaKnown RBP9.54□□□□□ -0.88
CDH9-202ENST00000505020 PTPROQ16827 1216 aa9.54□□□□□ -0.88
CDH9-202ENST00000505020 KRBA2Q6ZNG9 492 aa9.54□□□□□ -0.88
CDH9-202ENST00000505020 BANK1Q8NDB2 785 aa9.54□□□□□ -0.88
CDH9-202ENST00000505020 SPOCK3Q9BQ16 436 aa9.54□□□□□ -0.88
CDH9-202ENST00000505020 TLDC2A0PJX2 215 aa9.54□□□□□ -0.88
CDH9-202ENST00000505020 PAX3P23760 479 aa9.54□□□□□ -0.88
CDH9-202ENST00000505020 ARID4AP29374 1257 aaPredicted RBP9.54□□□□□ -0.88
CDH9-202ENST00000505020 HDGFL1Q5TGJ6 251 aa9.54□□□□□ -0.88
CDH9-202ENST00000505020 EGFLAMQ63HQ2 1017 aa9.54□□□□□ -0.88
CDH9-202ENST00000505020 LNPKQ9C0E8 428 aa9.54□□□□□ -0.88
CDH9-202ENST00000505020 CRISPLD2Q9H0B8 497 aa9.54□□□□□ -0.88
CDH9-202ENST00000505020 FAN1Q9Y2M0 1017 aa9.54□□□□□ -0.88
CDH9-202ENST00000505020 VAMP1P23763 118 aa9.53□□□□□ -0.88
CDH9-202ENST00000505020 U2SURPO15042 1029 aaKnown RBP9.52□□□□□ -0.89
CDH9-202ENST00000505020 APLP1P51693 650 aa9.52□□□□□ -0.89
CDH9-202ENST00000505020 RTL5Q5HYW3 569 aaPredicted RBP9.52□□□□□ -0.89
CDH9-202ENST00000505020 FBXO22Q8NEZ5 403 aa9.52□□□□□ -0.89
CDH9-202ENST00000505020 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.52□□□□□ -0.89
CDH9-202ENST00000505020 PCDH10Q9P2E7 1040 aa9.52□□□□□ -0.89
CDH9-202ENST00000505020 CCER1Q8TC90 406 aaPredicted RBP9.52□□□□□ -0.89
CDH9-202ENST00000505020 KCNB2Q92953 911 aa9.52□□□□□ -0.89
CDH9-202ENST00000505020 SPACA7Q96KW9 195 aa9.52□□□□□ -0.89
CDH9-202ENST00000505020 CHPF2Q9P2E5 772 aa9.52□□□□□ -0.89
CDH9-202ENST00000505020 RFC5P40937 340 aa9.51□□□□□ -0.89
CDH9-202ENST00000505020 CDCA8Q53HL2 280 aa9.51□□□□□ -0.89
CDH9-202ENST00000505020 HSP90AB2PQ58FF8 381 aa9.51□□□□□ -0.89
CDH9-202ENST00000505020 CLEC4GQ6UXB4 293 aa9.51□□□□□ -0.89
CDH9-202ENST00000505020 MTMR14Q8NCE2 650 aa9.51□□□□□ -0.89
CDH9-202ENST00000505020 ADAMTS19Q8TE59 1207 aa9.51□□□□□ -0.89
CDH9-202ENST00000505020 MAF1Q9H063 256 aa9.51□□□□□ -0.89
CDH9-202ENST00000505020 DPYSL4O14531 572 aa9.5□□□□□ -0.89
CDH9-202ENST00000505020 RECKO95980 971 aa9.5□□□□□ -0.89
CDH9-202ENST00000505020 FBXO31Q5XUX0 539 aaPredicted RBP9.49□□□□□ -0.89
CDH9-202ENST00000505020 NPAS4Q8IUM7 802 aa9.49□□□□□ -0.89
CDH9-202ENST00000505020 IPO4Q8TEX9 1081 aaKnown RBP9.49□□□□□ -0.89
CDH9-202ENST00000505020 GABBR1Q9UBS5 961 aa9.49□□□□□ -0.89
CDH9-202ENST00000505020 CCER2I3L3R5 266 aa9.49□□□□□ -0.89
CDH9-202ENST00000505020 MYBPC2Q14324 1141 aa9.49□□□□□ -0.89
CDH9-202ENST00000505020 SDE2Q6IQ49 451 aa9.49□□□□□ -0.89
CDH9-202ENST00000505020 PDAP1Q13442 181 aaKnown RBP9.48□□□□□ -0.89
CDH9-202ENST00000505020 AKT1S1Q96B36 256 aa9.48□□□□□ -0.89
CDH9-202ENST00000505020 PPP1R12CQ9BZL4 782 aa9.48□□□□□ -0.89
CDH9-202ENST00000505020 TBC1D2BQ9UPU7 963 aa9.47□□□□□ -0.89
CDH9-202ENST00000505020 ERCC5P28715 1186 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms