RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 ZC3H15Q8WU90 426 aaKnown RBP7.09□□□□□ -1.27
RFC1-209ENST00000504974 MTRQ99707 1265 aa7.09□□□□□ -1.27
RFC1-209ENST00000504974 DNAJB2P25686 324 aa7.08□□□□□ -1.28
RFC1-209ENST00000504974 TJAP1Q5JTD0 557 aa7.08□□□□□ -1.28
RFC1-209ENST00000504974 METTL3Q86U44 580 aaKnown RBP7.08□□□□□ -1.28
RFC1-209ENST00000504974 NKX2-3Q8TAU0 364 aa7.08□□□□□ -1.28
RFC1-209ENST00000504974 TMEM134Q9H6X4 195 aa7.08□□□□□ -1.28
RFC1-209ENST00000504974 ITGBL1O95965 494 aaPredicted RBP7.07□□□□□ -1.28
RFC1-209ENST00000504974 SLC10A3P09131 477 aa7.07□□□□□ -1.28
RFC1-209ENST00000504974 A0A0G2JS52 829 aa7.06□□□□□ -1.28
RFC1-209ENST00000504974 KCNC4Q03721 635 aa7.06□□□□□ -1.28
RFC1-209ENST00000504974 SLF2Q8IX21 1173 aa7.06□□□□□ -1.28
RFC1-209ENST00000504974 NYAP1Q6ZVC0 841 aa7.05□□□□□ -1.28
RFC1-209ENST00000504974 OATP04181 439 aa7.03□□□□□ -1.28
RFC1-209ENST00000504974 BLOC1S3Q6QNY0 202 aa7.03□□□□□ -1.28
RFC1-209ENST00000504974 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.02□□□□□ -1.29
RFC1-209ENST00000504974 CFHP08603 1231 aa7.02□□□□□ -1.29
RFC1-209ENST00000504974 PUS10Q3MIT2 529 aaKnown RBP7.02□□□□□ -1.29
RFC1-209ENST00000504974 IFFO2Q5TF58 517 aa7.02□□□□□ -1.29
RFC1-209ENST00000504974 KRI1Q8N9T8 703 aaKnown RBP7.02□□□□□ -1.29
RFC1-209ENST00000504974 SLC24A3Q9HC58 644 aa7.02□□□□□ -1.29
RFC1-209ENST00000504974 DDX11L8A8MPP1 907 aa7.01□□□□□ -1.29
RFC1-209ENST00000504974 TLL1O43897 1013 aa7.01□□□□□ -1.29
RFC1-209ENST00000504974 ZMYND10O75800 440 aa7.01□□□□□ -1.29
RFC1-209ENST00000504974 IL21Q9HBE4 155 aa7.01□□□□□ -1.29
RFC1-209ENST00000504974 PCDHB3Q9Y5E6 796 aa7□□□□□ -1.29
RFC1-209ENST00000504974 IRF6O14896 467 aa6.99□□□□□ -1.29
RFC1-209ENST00000504974 PPP1R18Q6NYC8 613 aa6.99□□□□□ -1.29
RFC1-209ENST00000504974 BARGINQ6ZT62 677 aa6.98□□□□□ -1.29
RFC1-209ENST00000504974 RDH13Q8NBN7 331 aa6.98□□□□□ -1.29
RFC1-209ENST00000504974 DAXXQ9UER7 740 aaPredicted RBP6.98□□□□□ -1.29
RFC1-209ENST00000504974 PPEF1O14829 653 aaPredicted RBP6.97□□□□□ -1.29
RFC1-209ENST00000504974 ZPR1O75312 459 aa6.97□□□□□ -1.29
RFC1-209ENST00000504974 SLC4A3P48751 1232 aa6.97□□□□□ -1.29
RFC1-209ENST00000504974 MDM2Q00987 491 aaPredicted RBP6.97□□□□□ -1.29
RFC1-209ENST00000504974 MAP2K5Q13163 448 aa6.97□□□□□ -1.29
RFC1-209ENST00000504974 CCDC102AQ96A19 550 aa6.97□□□□□ -1.29
RFC1-209ENST00000504974 ACTN4O43707 911 aaKnown RBP6.96□□□□□ -1.3
RFC1-209ENST00000504974 KMT5BQ4FZB7 885 aa6.95□□□□□ -1.3
RFC1-209ENST00000504974 REPIN1Q9BWE0 567 aaKnown RBP6.95□□□□□ -1.3
RFC1-209ENST00000504974 FUT2Q10981 343 aa6.94□□□□□ -1.3
RFC1-209ENST00000504974 NEUROD2Q15784 382 aa6.94□□□□□ -1.3
RFC1-209ENST00000504974 HLA-CQ95604 372 aa6.94□□□□□ -1.3
RFC1-209ENST00000504974 SCUBE3Q8IX30 993 aa6.93□□□□□ -1.3
RFC1-209ENST00000504974 AK7Q96M32 723 aa6.93□□□□□ -1.3
RFC1-209ENST00000504974 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.93□□□□□ -1.3
RFC1-209ENST00000504974 MINK1Q8N4C8 1332 aaPredicted RBP6.93□□□□□ -1.3
RFC1-209ENST00000504974 S1PR4O95977 384 aa6.92□□□□□ -1.3
RFC1-209ENST00000504974 PRKD2Q9BZL6 878 aa6.92□□□□□ -1.3
RFC1-209ENST00000504974 GCGRP47871 477 aa6.91□□□□□ -1.3
RFC1-209ENST00000504974 NECTIN2Q92692 538 aa6.91□□□□□ -1.3
RFC1-209ENST00000504974 EMID1Q96A84 441 aaPredicted RBP6.91□□□□□ -1.3
RFC1-209ENST00000504974 RNF223E7ERA6 249 aa6.9□□□□□ -1.3
RFC1-209ENST00000504974 BRPF1P55201 1214 aaPredicted RBP6.9□□□□□ -1.3
RFC1-209ENST00000504974 PRR14Q9BWN1 585 aa6.9□□□□□ -1.3
RFC1-209ENST00000504974 SLC27A5Q9Y2P5 690 aa6.9□□□□□ -1.3
RFC1-209ENST00000504974 GUCA2AQ02747 115 aa6.89□□□□□ -1.31
RFC1-209ENST00000504974 MORN1Q5T089 497 aa6.89□□□□□ -1.31
RFC1-209ENST00000504974 TRIM66O15016 1216 aa6.88□□□□□ -1.31
RFC1-209ENST00000504974 CD46P15529 392 aa6.88□□□□□ -1.31
RFC1-209ENST00000504974 PLA2G2CQ5R387 149 aa6.88□□□□□ -1.31
RFC1-209ENST00000504974 RSPH4AQ5TD94 716 aa6.88□□□□□ -1.31
RFC1-209ENST00000504974 RNF19BQ6ZMZ0 732 aa6.88□□□□□ -1.31
RFC1-209ENST00000504974 IRX2Q9BZI1 471 aaPredicted RBP6.88□□□□□ -1.31
RFC1-209ENST00000504974 PRDM9Q9NQV7 894 aa6.88□□□□□ -1.31
RFC1-209ENST00000504974 NR1I2O75469 434 aa6.87□□□□□ -1.31
RFC1-209ENST00000504974 ATP6V1AP38606 617 aa6.87□□□□□ -1.31
RFC1-209ENST00000504974 SULF1Q8IWU6 871 aa6.87□□□□□ -1.31
RFC1-209ENST00000504974 GPBP1L1Q9HC44 474 aaPredicted RBP6.87□□□□□ -1.31
RFC1-209ENST00000504974 RGS20O76081 388 aa6.86□□□□□ -1.31
RFC1-209ENST00000504974 ADH1BP00325 375 aa6.86□□□□□ -1.31
RFC1-209ENST00000504974 PDE4DQ08499 809 aa6.86□□□□□ -1.31
RFC1-209ENST00000504974 FAM160A2Q8N612 972 aaPredicted RBP6.86□□□□□ -1.31
RFC1-209ENST00000504974 THAP11Q96EK4 314 aa6.86□□□□□ -1.31
RFC1-209ENST00000504974 SPSB2Q99619 263 aa6.86□□□□□ -1.31
RFC1-209ENST00000504974 TMUB1Q9BVT8 246 aa6.86□□□□□ -1.31
RFC1-209ENST00000504974 FAM217BQ9NTX9 383 aaPredicted RBP6.86□□□□□ -1.31
RFC1-209ENST00000504974 TTLL12Q14166 644 aaPredicted RBP6.85□□□□□ -1.31
RFC1-209ENST00000504974 LIAT1Q6ZQX7 453 aa6.85□□□□□ -1.31
RFC1-209ENST00000504974 SYMPKQ92797 1274 aaKnown RBP6.85□□□□□ -1.31
RFC1-209ENST00000504974 SLC6A16Q9GZN6 736 aa6.85□□□□□ -1.31
RFC1-209ENST00000504974 GPCPD1Q9NPB8 672 aa6.85□□□□□ -1.31
RFC1-209ENST00000504974 KDM4AO75164 1064 aa6.84□□□□□ -1.31
RFC1-209ENST00000504974 SSTR3P32745 418 aaPredicted RBP6.83□□□□□ -1.32
RFC1-209ENST00000504974 GFRA3O60609 400 aa6.82□□□□□ -1.32
RFC1-209ENST00000504974 CLCN1P35523 988 aa6.82□□□□□ -1.32
RFC1-209ENST00000504974 GGCXP38435 758 aa6.82□□□□□ -1.32
RFC1-209ENST00000504974 SLC19A1P41440 591 aa6.82□□□□□ -1.32
RFC1-209ENST00000504974 BRICD5Q6PL45 260 aa6.82□□□□□ -1.32
RFC1-209ENST00000504974 KDM4CQ9H3R0 1056 aa6.82□□□□□ -1.32
RFC1-209ENST00000504974 LCE2BO14633 110 aa6.81□□□□□ -1.32
RFC1-209ENST00000504974 NDUFV2P19404 249 aa6.81□□□□□ -1.32
RFC1-209ENST00000504974 GIGYF2Q6Y7W6 1299 aaKnown RBP6.81□□□□□ -1.32
RFC1-209ENST00000504974 HOXA2O43364 376 aa6.8□□□□□ -1.32
RFC1-209ENST00000504974 FMNL1O95466 1100 aaPredicted RBP6.8□□□□□ -1.32
RFC1-209ENST00000504974 MS4A1P11836 297 aa6.8□□□□□ -1.32
RFC1-209ENST00000504974 TRIM67Q6ZTA4 783 aa6.8□□□□□ -1.32
RFC1-209ENST00000504974 PARP9Q8IXQ6 854 aa6.8□□□□□ -1.32
RFC1-209ENST00000504974 PCDHGC3Q9UN70 934 aa6.8□□□□□ -1.32
RFC1-209ENST00000504974 FCF1Q9Y324 198 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms