RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 ERVK-7P63135 1459 aa9.77□□□□□ -0.85
GYPB-204ENST00000504951 CAMSAP2Q08AD1 1489 aa9.77□□□□□ -0.85
GYPB-204ENST00000504951 NCOA2Q15596 1464 aa9.77□□□□□ -0.85
GYPB-204ENST00000504951 TIAM1Q13009 1591 aa9.76□□□□□ -0.85
GYPB-204ENST00000504951 EID1Q9Y6B2 187 aa9.76□□□□□ -0.85
GYPB-204ENST00000504951 LRRC9Q6ZRR7 1453 aa9.76□□□□□ -0.85
GYPB-204ENST00000504951 ABCC3O15438 1527 aa9.76□□□□□ -0.85
GYPB-204ENST00000504951 ARHGEF5Q12774 1597 aa9.75□□□□□ -0.85
GYPB-204ENST00000504951 XIRP1Q702N8 1843 aaKnown RBP9.75□□□□□ -0.85
GYPB-204ENST00000504951 UPF1Q92900 1129 aaKnown RBP eCLIP9.75□□□□□ -0.85
GYPB-204ENST00000504951 JCADQ9P266 1359 aa9.75□□□□□ -0.85
GYPB-204ENST00000504951 UBR1Q8IWV7 1749 aa9.74□□□□□ -0.85
GYPB-204ENST00000504951 TMEM94Q12767 1356 aa9.74□□□□□ -0.85
GYPB-204ENST00000504951 EHBP1L1Q8N3D4 1523 aa9.73□□□□□ -0.85
GYPB-204ENST00000504951 ZNF772Q68DY9 489 aaPredicted RBP9.73□□□□□ -0.85
GYPB-204ENST00000504951 SPATA31A6Q5VVP1 1343 aa9.73□□□□□ -0.85
GYPB-204ENST00000504951 TMEM2Q9UHN6 1383 aa9.73□□□□□ -0.85
GYPB-204ENST00000504951 FGD6Q6ZV73 1430 aa9.73□□□□□ -0.85
GYPB-204ENST00000504951 NCOA3Q9Y6Q9 1424 aa9.73□□□□□ -0.85
GYPB-204ENST00000504951 EIF2AK4Q9P2K8 1649 aaKnown RBP9.72□□□□□ -0.85
GYPB-204ENST00000504951 KDM5AP29375 1690 aaKnown RBP9.72□□□□□ -0.85
GYPB-204ENST00000504951 SLAIN2Q9P270 581 aa9.72□□□□□ -0.85
GYPB-204ENST00000504951 CDK12Q9NYV4 1490 aaPredicted RBP9.72□□□□□ -0.85
GYPB-204ENST00000504951 EVX2Q03828 476 aa9.71□□□□□ -0.86
GYPB-204ENST00000504951 NKTRP30414 1462 aaKnown RBP9.71□□□□□ -0.86
GYPB-204ENST00000504951 PRDM15P57071 1507 aaPredicted RBP9.71□□□□□ -0.86
GYPB-204ENST00000504951 MAST1Q9Y2H9 1570 aa9.71□□□□□ -0.86
GYPB-204ENST00000504951 TET3O43151 1660 aa9.71□□□□□ -0.86
GYPB-204ENST00000504951 PROSER2Q86WR7 435 aaPredicted RBP9.7□□□□□ -0.86
GYPB-204ENST00000504951 MAP3K1Q13233 1512 aa9.7□□□□□ -0.86
GYPB-204ENST00000504951 ROBO1Q9Y6N7 1651 aa9.7□□□□□ -0.86
GYPB-204ENST00000504951 C19orf67A6NJJ6 358 aa9.69□□□□□ -0.86
GYPB-204ENST00000504951 MROH1Q8NDA8 1641 aa9.68□□□□□ -0.86
GYPB-204ENST00000504951 PRR29P0C7W0 189 aa9.68□□□□□ -0.86
GYPB-204ENST00000504951 NWD1Q149M9 1564 aa9.67□□□□□ -0.86
GYPB-204ENST00000504951 MSH6P52701 1360 aa9.67□□□□□ -0.86
GYPB-204ENST00000504951 RXRBP28702 533 aa9.66□□□□□ -0.86
GYPB-204ENST00000504951 IDI1Q13907 227 aa9.66□□□□□ -0.86
GYPB-204ENST00000504951 SLC52A1Q9NWF4 448 aa9.66□□□□□ -0.86
GYPB-204ENST00000504951 DUOX2Q9NRD8 1548 aa9.66□□□□□ -0.86
GYPB-204ENST00000504951 HDGFP51858 240 aaKnown RBP9.64□□□□□ -0.87
GYPB-204ENST00000504951 TBX22Q9Y458 520 aa9.64□□□□□ -0.87
GYPB-204ENST00000504951 EFCAB6Q5THR3 1501 aa9.64□□□□□ -0.87
GYPB-204ENST00000504951 ERBINQ96RT1 1412 aa9.64□□□□□ -0.87
GYPB-204ENST00000504951 COL16A1Q07092 1604 aaPredicted RBP9.64□□□□□ -0.87
GYPB-204ENST00000504951 LMTK2Q8IWU2 1503 aa9.63□□□□□ -0.87
GYPB-204ENST00000504951 PHLPP1O60346 1717 aa9.63□□□□□ -0.87
GYPB-204ENST00000504951 CADPS2Q86UW7 1296 aa9.63□□□□□ -0.87
GYPB-204ENST00000504951 SLC26A8Q96RN1 970 aa9.63□□□□□ -0.87
GYPB-204ENST00000504951 C19orf44Q9H6X5 657 aa9.63□□□□□ -0.87
GYPB-204ENST00000504951 SETD1AO15047 1707 aaKnown RBP9.62□□□□□ -0.87
GYPB-204ENST00000504951 STAG3Q9UJ98 1225 aa9.62□□□□□ -0.87
GYPB-204ENST00000504951 PIK3C2BO00750 1634 aa9.62□□□□□ -0.87
GYPB-204ENST00000504951 LRP6O75581 1613 aa9.62□□□□□ -0.87
GYPB-204ENST00000504951 AHDC1Q5TGY3 1603 aaPredicted RBP9.62□□□□□ -0.87
GYPB-204ENST00000504951 NOS1P29475 1434 aa9.62□□□□□ -0.87
GYPB-204ENST00000504951 MYOM3Q5VTT5 1437 aa9.62□□□□□ -0.87
GYPB-204ENST00000504951 PIK3R4Q99570 1358 aa9.62□□□□□ -0.87
GYPB-204ENST00000504951 CFAP65Q6ZU64 1925 aaKnown RBP9.61□□□□□ -0.87
GYPB-204ENST00000504951 PLEKHG1Q9ULL1 1385 aa9.61□□□□□ -0.87
GYPB-204ENST00000504951 SHPRHQ149N8 1683 aa9.61□□□□□ -0.87
GYPB-204ENST00000504951 CEP152O94986 1710 aa9.6□□□□□ -0.87
GYPB-204ENST00000504951 CHADLQ6NUI6 762 aa9.6□□□□□ -0.87
GYPB-204ENST00000504951 CHD2O14647 1828 aaKnown RBP9.6□□□□□ -0.87
GYPB-204ENST00000504951 KANK1Q14678 1352 aa9.6□□□□□ -0.87
GYPB-204ENST00000504951 ZFYVE9O95405 1425 aa9.59□□□□□ -0.87
GYPB-204ENST00000504951 TRIM52Q96A61 297 aa9.59□□□□□ -0.87
GYPB-204ENST00000504951 SETD5Q9C0A6 1442 aa9.58□□□□□ -0.88
GYPB-204ENST00000504951 RBM6P78332 1123 aaKnown RBP9.58□□□□□ -0.88
GYPB-204ENST00000504951 MEX3CQ5U5Q3 659 aaKnown RBP9.58□□□□□ -0.88
GYPB-204ENST00000504951 SRCAPQ6ZRS2 3230 aa9.58□□□□□ -0.88
GYPB-204ENST00000504951 KIF15Q9NS87 1388 aa9.58□□□□□ -0.88
GYPB-204ENST00000504951 DCCP43146 1447 aa9.57□□□□□ -0.88
GYPB-204ENST00000504951 GABBR2O75899 941 aa9.57□□□□□ -0.88
GYPB-204ENST00000504951 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.57□□□□□ -0.88
GYPB-204ENST00000504951 RBM33Q96EV2 1170 aaKnown RBP9.57□□□□□ -0.88
GYPB-204ENST00000504951 RPRD2Q5VT52 1461 aaKnown RBP9.57□□□□□ -0.88
GYPB-204ENST00000504951 ADGRB3O60242 1522 aa9.56□□□□□ -0.88
GYPB-204ENST00000504951 DIP2AQ14689 1571 aa9.56□□□□□ -0.88
GYPB-204ENST00000504951 ATF3P18847 181 aa9.56□□□□□ -0.88
GYPB-204ENST00000504951 CCDC125Q86Z20 511 aa9.56□□□□□ -0.88
GYPB-204ENST00000504951 LRRC59Q96AG4 307 aaKnown RBP9.56□□□□□ -0.88
GYPB-204ENST00000504951 BRINP3Q76B58 766 aa9.55□□□□□ -0.88
GYPB-204ENST00000504951 NGLY1Q96IV0 654 aa9.55□□□□□ -0.88
GYPB-204ENST00000504951 QTRT2Q9H974 415 aaKnown RBP9.55□□□□□ -0.88
GYPB-204ENST00000504951 ABCC5O15440 1437 aa9.55□□□□□ -0.88
GYPB-204ENST00000504951 AFF2P51816 1311 aa9.55□□□□□ -0.88
GYPB-204ENST00000504951 CLCN6P51797 869 aa9.53□□□□□ -0.88
GYPB-204ENST00000504951 RRP7BPQ9NSQ0 103 aa9.53□□□□□ -0.88
GYPB-204ENST00000504951 ZRANB1Q9UGI0 708 aa9.53□□□□□ -0.88
GYPB-204ENST00000504951 ADAMTS13Q76LX8 1427 aa9.53□□□□□ -0.88
GYPB-204ENST00000504951 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.53□□□□□ -0.88
GYPB-204ENST00000504951 ATAD2Q6PL18 1390 aa9.52□□□□□ -0.88
GYPB-204ENST00000504951 RGS12O14924 1447 aa9.52□□□□□ -0.89
GYPB-204ENST00000504951 RIMS2Q9UQ26 1411 aa9.52□□□□□ -0.89
GYPB-204ENST00000504951 FNBP4Q8N3X1 1017 aaPredicted RBP9.51□□□□□ -0.89
GYPB-204ENST00000504951 BCANQ96GW7 911 aa9.51□□□□□ -0.89
GYPB-204ENST00000504951 ANKRD30AQ9BXX3 1397 aa9.5□□□□□ -0.89
GYPB-204ENST00000504951 CD44P16070 742 aaKnown RBP9.5□□□□□ -0.89
GYPB-204ENST00000504951 FARP1Q9Y4F1 1045 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms