RNA–Protein interactions for RNA: ENST00000504672.5

PDGFC-204, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-204ENST00000504672 PHLPP1O60346 1717 aa14.31□□□□□ -0.12
PDGFC-204ENST00000504672 KANK1Q14678 1352 aa14.31□□□□□ -0.12
PDGFC-204ENST00000504672 DUOX2Q9NRD8 1548 aa14.31□□□□□ -0.12
PDGFC-204ENST00000504672 ATF3P18847 181 aa14.3□□□□□ -0.12
PDGFC-204ENST00000504672 AFF2P51816 1311 aa14.3□□□□□ -0.12
PDGFC-204ENST00000504672 MAST1Q9Y2H9 1570 aa14.3□□□□□ -0.12
PDGFC-204ENST00000504672 EIF2AK4Q9P2K8 1649 aaKnown RBP14.29□□□□□ -0.12
PDGFC-204ENST00000504672 CHGAP10645 457 aaKnown RBP14.28□□□□□ -0.12
PDGFC-204ENST00000504672 MYOM3Q5VTT5 1437 aa14.28□□□□□ -0.12
PDGFC-204ENST00000504672 C19orf44Q9H6X5 657 aa14.28□□□□□ -0.12
PDGFC-204ENST00000504672 QTRT2Q9H974 415 aaKnown RBP14.28□□□□□ -0.12
PDGFC-204ENST00000504672 SLC52A1Q9NWF4 448 aa14.28□□□□□ -0.12
PDGFC-204ENST00000504672 NKTRP30414 1462 aaKnown RBP14.27□□□□□ -0.12
PDGFC-204ENST00000504672 CADPS2Q86UW7 1296 aa14.27□□□□□ -0.13
PDGFC-204ENST00000504672 TBX22Q9Y458 520 aa14.27□□□□□ -0.13
PDGFC-204ENST00000504672 ABCC5O15440 1437 aa14.26□□□□□ -0.13
PDGFC-204ENST00000504672 BRINP3Q76B58 766 aa14.26□□□□□ -0.13
PDGFC-204ENST00000504672 C8orf37Q96NL8 207 aa14.26□□□□□ -0.13
PDGFC-204ENST00000504672 COL16A1Q07092 1604 aaPredicted RBP14.26□□□□□ -0.13
PDGFC-204ENST00000504672 FGD6Q6ZV73 1430 aa14.25□□□□□ -0.13
PDGFC-204ENST00000504672 HDGFP51858 240 aaKnown RBP14.24□□□□□ -0.13
PDGFC-204ENST00000504672 PIAS4Q8N2W9 510 aaPredicted RBP14.24□□□□□ -0.13
PDGFC-204ENST00000504672 DDX17Q92841 729 aaKnown RBP14.24□□□□□ -0.13
PDGFC-204ENST00000504672 ERBINQ96RT1 1412 aa14.24□□□□□ -0.13
PDGFC-204ENST00000504672 PLEKHG1Q9ULL1 1385 aa14.23□□□□□ -0.13
PDGFC-204ENST00000504672 NOS1P29475 1434 aa14.23□□□□□ -0.13
PDGFC-204ENST00000504672 RIMS2Q9UQ26 1411 aa14.23□□□□□ -0.13
PDGFC-204ENST00000504672 NWD1Q149M9 1564 aa14.22□□□□□ -0.13
PDGFC-204ENST00000504672 LOC105371045A0A1W2PR82 267 aa14.22□□□□□ -0.13
PDGFC-204ENST00000504672 RBM6P78332 1123 aaKnown RBP14.22□□□□□ -0.13
PDGFC-204ENST00000504672 AMOTL2Q9Y2J4 779 aa14.22□□□□□ -0.13
PDGFC-204ENST00000504672 ADAMTS2O95450 1211 aa14.21□□□□□ -0.13
PDGFC-204ENST00000504672 NGLY1Q96IV0 654 aa14.2□□□□□ -0.14
PDGFC-204ENST00000504672 ZFYVE9O95405 1425 aa14.2□□□□□ -0.14
PDGFC-204ENST00000504672 ADGRB3O60242 1522 aa14.19□□□□□ -0.14
PDGFC-204ENST00000504672 RGS12O14924 1447 aa14.18□□□□□ -0.14
PDGFC-204ENST00000504672 NCOA3Q9Y6Q9 1424 aa14.18□□□□□ -0.14
PDGFC-204ENST00000504672 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.18□□□□□ -0.14
PDGFC-204ENST00000504672 LRRC59Q96AG4 307 aaKnown RBP14.18□□□□□ -0.14
PDGFC-204ENST00000504672 ANKRD30AQ9BXX3 1397 aa14.18□□□□□ -0.14
PDGFC-204ENST00000504672 CDK12Q9NYV4 1490 aaPredicted RBP14.18□□□□□ -0.14
PDGFC-204ENST00000504672 DAPK1P53355 1430 aa14.17□□□□□ -0.14
PDGFC-204ENST00000504672 ZRANB1Q9UGI0 708 aa14.17□□□□□ -0.14
PDGFC-204ENST00000504672 KDM5AP29375 1690 aaKnown RBP14.17□□□□□ -0.14
PDGFC-204ENST00000504672 LMTK2Q8IWU2 1503 aa14.16□□□□□ -0.14
PDGFC-204ENST00000504672 ADAMTS13Q76LX8 1427 aa14.15□□□□□ -0.14
PDGFC-204ENST00000504672 VPS8Q8N3P4 1428 aa14.15□□□□□ -0.14
PDGFC-204ENST00000504672 AHDC1Q5TGY3 1603 aaPredicted RBP14.15□□□□□ -0.14
PDGFC-204ENST00000504672 CHD2O14647 1828 aaKnown RBP14.14□□□□□ -0.15
PDGFC-204ENST00000504672 PTPRUQ92729 1446 aa14.14□□□□□ -0.15
PDGFC-204ENST00000504672 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.13□□□□□ -0.15
PDGFC-204ENST00000504672 SHPRHQ149N8 1683 aa14.12□□□□□ -0.15
PDGFC-204ENST00000504672 USP21Q9UK80 565 aa14.12□□□□□ -0.15
PDGFC-204ENST00000504672 SETD5Q9C0A6 1442 aa14.12□□□□□ -0.15
PDGFC-204ENST00000504672 DIP2AQ14689 1571 aa14.12□□□□□ -0.15
PDGFC-204ENST00000504672 PNPLA6Q8IY17 1366 aa14.11□□□□□ -0.15
PDGFC-204ENST00000504672 FAM50AQ14320 339 aaKnown RBP14.11□□□□□ -0.15
PDGFC-204ENST00000504672 ATAD2Q6PL18 1390 aa14.1□□□□□ -0.15
PDGFC-204ENST00000504672 APLP2Q06481 763 aa14.1□□□□□ -0.15
PDGFC-204ENST00000504672 ASXL1Q8IXJ9 1541 aa14.1□□□□□ -0.15
PDGFC-204ENST00000504672 PIK3R4Q99570 1358 aa14.09□□□□□ -0.15
PDGFC-204ENST00000504672 PTPN23Q9H3S7 1636 aa14.09□□□□□ -0.15
PDGFC-204ENST00000504672 MST1RQ04912 1400 aa14.08□□□□□ -0.15
PDGFC-204ENST00000504672 SETBP1Q9Y6X0 1596 aa14.08□□□□□ -0.16
PDGFC-204ENST00000504672 TMEM131LA2VDJ0 1609 aa14.08□□□□□ -0.16
PDGFC-204ENST00000504672 ORAI2Q96SN7 254 aa14.07□□□□□ -0.16
PDGFC-204ENST00000504672 TRPC5Q9UL62 973 aaPredicted RBP14.07□□□□□ -0.16
PDGFC-204ENST00000504672 ANKRD50Q9ULJ7 1429 aa14.07□□□□□ -0.16
PDGFC-204ENST00000504672 METP08581 1390 aa14.06□□□□□ -0.16
PDGFC-204ENST00000504672 RPRD2Q5VT52 1461 aaKnown RBP14.06□□□□□ -0.16
PDGFC-204ENST00000504672 ZNF326Q5BKZ1 582 aaKnown RBP14.05□□□□□ -0.16
PDGFC-204ENST00000504672 FNBP4Q8N3X1 1017 aaPredicted RBP14.05□□□□□ -0.16
PDGFC-204ENST00000504672 MYO5BQ9ULV0 1848 aa14.05□□□□□ -0.16
PDGFC-204ENST00000504672 CROCC2H7BZ55 1655 aa14.04□□□□□ -0.16
PDGFC-204ENST00000504672 GCC2Q8IWJ2 1684 aa14.04□□□□□ -0.16
PDGFC-204ENST00000504672 DCCP43146 1447 aa14.02□□□□□ -0.16
PDGFC-204ENST00000504672 CCDC125Q86Z20 511 aa14.02□□□□□ -0.17
PDGFC-204ENST00000504672 EP400Q96L91 3159 aa14.02□□□□□ -0.17
PDGFC-204ENST00000504672 TRPM2O94759 1503 aa14.01□□□□□ -0.17
PDGFC-204ENST00000504672 DEFB132Q7Z7B7 95 aa14.01□□□□□ -0.17
PDGFC-204ENST00000504672 SOS2Q07890 1332 aaPredicted RBP14□□□□□ -0.17
PDGFC-204ENST00000504672 XPCQ01831 940 aaPredicted RBP13.99□□□□□ -0.17
PDGFC-204ENST00000504672 C1orf167Q5SNV9 1468 aa13.99□□□□□ -0.17
PDGFC-204ENST00000504672 GJD4Q96KN9 370 aaPredicted RBP13.98□□□□□ -0.17
PDGFC-204ENST00000504672 ADGRL2O95490 1459 aa13.98□□□□□ -0.17
PDGFC-204ENST00000504672 ATRNO75882 1429 aa13.98□□□□□ -0.17
PDGFC-204ENST00000504672 ADGRL3Q9HAR2 1447 aa13.98□□□□□ -0.17
PDGFC-204ENST00000504672 NUP155O75694 1391 aa13.97□□□□□ -0.17
PDGFC-204ENST00000504672 NHSL1Q5SYE7 1610 aa13.97□□□□□ -0.17
PDGFC-204ENST00000504672 ITGAEP38570 1179 aa13.96□□□□□ -0.17
PDGFC-204ENST00000504672 UNC13BO14795 1591 aa13.96□□□□□ -0.18
PDGFC-204ENST00000504672 BCL9LQ86UU0 1499 aa13.95□□□□□ -0.18
PDGFC-204ENST00000504672 ESCO1Q5FWF5 840 aa13.95□□□□□ -0.18
PDGFC-204ENST00000504672 PSDA5PKW4 1024 aaPredicted RBP13.94□□□□□ -0.18
PDGFC-204ENST00000504672 PLEKHG5O94827 1062 aa13.94□□□□□ -0.18
PDGFC-204ENST00000504672 PTCH1Q13635 1447 aa13.94□□□□□ -0.18
PDGFC-204ENST00000504672 NUTM2FA1L443 756 aa13.93□□□□□ -0.18
PDGFC-204ENST00000504672 FOXO3O43524 673 aa13.93□□□□□ -0.18
PDGFC-204ENST00000504672 ROBO2Q9HCK4 1378 aa13.93□□□□□ -0.18
PDGFC-204ENST00000504672 XRN1Q8IZH2 1706 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms