RNA–Protein interactions for RNA: ENST00000504571.5

ATP2C1-206, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 3

Gene ATP2C1, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-206ENST00000504571 THSD4Q6ZMP0 1018 aa6.95□□□□□ -1.3
ATP2C1-206ENST00000504571 TATDN2Q93075 761 aa6.95□□□□□ -1.3
ATP2C1-206ENST00000504571 EYA1Q99502 592 aa6.95□□□□□ -1.3
ATP2C1-206ENST00000504571 NUDT18Q6ZVK8 323 aa6.94□□□□□ -1.3
ATP2C1-206ENST00000504571 IL27Q8NEV9 243 aa6.94□□□□□ -1.3
ATP2C1-206ENST00000504571 KIAA1468Q9P260 1216 aa6.94□□□□□ -1.3
ATP2C1-206ENST00000504571 RABGEF1Q9UJ41 708 aa6.94□□□□□ -1.3
ATP2C1-206ENST00000504571 REPIN1Q9BWE0 567 aaKnown RBP6.93□□□□□ -1.3
ATP2C1-206ENST00000504571 FAM117AQ9C073 453 aa6.93□□□□□ -1.3
ATP2C1-206ENST00000504571 NBPF3Q9H094 633 aa6.93□□□□□ -1.3
ATP2C1-206ENST00000504571 PNMA3Q9UL41 463 aa6.93□□□□□ -1.3
ATP2C1-206ENST00000504571 RCCD1A6NED2 376 aa6.92□□□□□ -1.3
ATP2C1-206ENST00000504571 DNAJB2P25686 324 aa6.92□□□□□ -1.3
ATP2C1-206ENST00000504571 MS4A1P11836 297 aa6.91□□□□□ -1.3
ATP2C1-206ENST00000504571 SSTR3P32745 418 aaPredicted RBP6.91□□□□□ -1.3
ATP2C1-206ENST00000504571 FAM217BQ9NTX9 383 aaPredicted RBP6.91□□□□□ -1.3
ATP2C1-206ENST00000504571 SEPT9Q9UHD8 586 aaPredicted RBP6.91□□□□□ -1.3
ATP2C1-206ENST00000504571 PLEKHG3A1L390 1219 aa6.9□□□□□ -1.3
ATP2C1-206ENST00000504571 C3orf80F5H4A9 247 aa6.9□□□□□ -1.3
ATP2C1-206ENST00000504571 NLRP7Q8WX94 980 aa6.9□□□□□ -1.3
ATP2C1-206ENST00000504571 SMAPO00193 183 aa6.89□□□□□ -1.31
ATP2C1-206ENST00000504571 BCAMP50895 628 aa6.89□□□□□ -1.31
ATP2C1-206ENST00000504571 TMEM134Q9H6X4 195 aa6.89□□□□□ -1.31
ATP2C1-206ENST00000504571 C14orf37Q86TY3 774 aa6.88□□□□□ -1.31
ATP2C1-206ENST00000504571 SULF1Q8IWU6 871 aa6.88□□□□□ -1.31
ATP2C1-206ENST00000504571 ZFRQ96KR1 1074 aaKnown RBP6.88□□□□□ -1.31
ATP2C1-206ENST00000504571 GOPCQ9HD26 462 aa6.88□□□□□ -1.31
ATP2C1-206ENST00000504571 FAM98CQ17RN3 349 aaKnown RBP6.87□□□□□ -1.31
ATP2C1-206ENST00000504571 LAPTM4BQ86VI4 370 aa6.87□□□□□ -1.31
ATP2C1-206ENST00000504571 ANKK1Q8NFD2 765 aa6.87□□□□□ -1.31
ATP2C1-206ENST00000504571 BEGAINQ9BUH8 593 aa6.87□□□□□ -1.31
ATP2C1-206ENST00000504571 HDGFP51858 240 aaKnown RBP6.86□□□□□ -1.31
ATP2C1-206ENST00000504571 RSPH6AQ9H0K4 717 aa6.86□□□□□ -1.31
ATP2C1-206ENST00000504571 SOWAHBA6NEL2 793 aa6.85□□□□□ -1.31
ATP2C1-206ENST00000504571 SLC4A3P48751 1232 aa6.85□□□□□ -1.31
ATP2C1-206ENST00000504571 DIXDC1Q155Q3 683 aa6.85□□□□□ -1.31
ATP2C1-206ENST00000504571 RSPH4AQ5TD94 716 aa6.85□□□□□ -1.31
ATP2C1-206ENST00000504571 ERICH6Q7L0X2 663 aa6.85□□□□□ -1.31
ATP2C1-206ENST00000504571 CD46P15529 392 aa6.84□□□□□ -1.31
ATP2C1-206ENST00000504571 SH3D19Q5HYK7 790 aa6.84□□□□□ -1.31
ATP2C1-206ENST00000504571 WBP1LQ9NX94 342 aa6.84□□□□□ -1.31
ATP2C1-206ENST00000504571 DDX11L8A8MPP1 907 aa6.83□□□□□ -1.32
ATP2C1-206ENST00000504571 SWT1Q5T5J6 900 aaKnown RBP6.83□□□□□ -1.32
ATP2C1-206ENST00000504571 PCMTD1Q96MG8 357 aaPredicted RBP6.82□□□□□ -1.32
ATP2C1-206ENST00000504571 SKIV2LQ15477 1246 aaKnown RBP6.81□□□□□ -1.32
ATP2C1-206ENST00000504571 SLF2Q8IX21 1173 aa6.81□□□□□ -1.32
ATP2C1-206ENST00000504571 RDH13Q8NBN7 331 aa6.81□□□□□ -1.32
ATP2C1-206ENST00000504571 SAMD7Q7Z3H4 446 aa6.8□□□□□ -1.32
ATP2C1-206ENST00000504571 NUTM1Q86Y26 1132 aa6.8□□□□□ -1.32
ATP2C1-206ENST00000504571 TBC1D2Q9BYX2 928 aa6.8□□□□□ -1.32
ATP2C1-206ENST00000504571 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.8□□□□□ -1.32
ATP2C1-206ENST00000504571 IFFO2Q5TF58 517 aa6.79□□□□□ -1.32
ATP2C1-206ENST00000504571 MYSM1Q5VVJ2 828 aa6.79□□□□□ -1.32
ATP2C1-206ENST00000504571 SPIRE2Q8WWL2 714 aa6.79□□□□□ -1.32
ATP2C1-206ENST00000504571 NECTIN2Q92692 538 aa6.79□□□□□ -1.32
ATP2C1-206ENST00000504571 LRCH3Q96II8 777 aa6.79□□□□□ -1.32
ATP2C1-206ENST00000504571 HPS5Q9UPZ3 1129 aa6.79□□□□□ -1.32
ATP2C1-206ENST00000504571 GCGRP47871 477 aa6.78□□□□□ -1.32
ATP2C1-206ENST00000504571 USP46P62068 366 aa6.78□□□□□ -1.32
ATP2C1-206ENST00000504571 TSR3Q9UJK0 312 aaKnown RBP6.78□□□□□ -1.32
ATP2C1-206ENST00000504571 A0A0G2JS52 829 aa6.77□□□□□ -1.33
ATP2C1-206ENST00000504571 KDM4AO75164 1064 aa6.77□□□□□ -1.33
ATP2C1-206ENST00000504571 SLC10A3P09131 477 aa6.77□□□□□ -1.33
ATP2C1-206ENST00000504571 GJA5P36382 358 aa6.77□□□□□ -1.33
ATP2C1-206ENST00000504571 CLK2P49760 499 aaKnown RBP6.77□□□□□ -1.33
ATP2C1-206ENST00000504571 ITGBL1O95965 494 aaPredicted RBP6.76□□□□□ -1.33
ATP2C1-206ENST00000504571 TUSC1Q2TAM9 212 aa6.76□□□□□ -1.33
ATP2C1-206ENST00000504571 POLR3EQ9NVU0 708 aa6.76□□□□□ -1.33
ATP2C1-206ENST00000504571 SUPT5HO00267 1087 aaKnown RBP6.75□□□□□ -1.33
ATP2C1-206ENST00000504571 SPTLC1O15269 473 aa6.75□□□□□ -1.33
ATP2C1-206ENST00000504571 RNF40O75150 1001 aa6.75□□□□□ -1.33
ATP2C1-206ENST00000504571 PPP4CP60510 307 aa6.75□□□□□ -1.33
ATP2C1-206ENST00000504571 RIC3Q7Z5B4 369 aa6.75□□□□□ -1.33
ATP2C1-206ENST00000504571 ATP1B4Q9UN42 357 aaPredicted RBP6.75□□□□□ -1.33
ATP2C1-206ENST00000504571 CFHP08603 1231 aa6.74□□□□□ -1.33
ATP2C1-206ENST00000504571 KMT5BQ4FZB7 885 aa6.74□□□□□ -1.33
ATP2C1-206ENST00000504571 GRIPAP1Q4V328 841 aa6.74□□□□□ -1.33
ATP2C1-206ENST00000504571 RSBN1LQ6PCB5 846 aaPredicted RBP6.74□□□□□ -1.33
ATP2C1-206ENST00000504571 NYAP1Q6ZVC0 841 aa6.74□□□□□ -1.33
ATP2C1-206ENST00000504571 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.74□□□□□ -1.33
ATP2C1-206ENST00000504571 MOXD2PA6NHM9 499 aa6.73□□□□□ -1.33
ATP2C1-206ENST00000504571 HOXA2O43364 376 aa6.73□□□□□ -1.33
ATP2C1-206ENST00000504571 KCNC4Q03721 635 aa6.73□□□□□ -1.33
ATP2C1-206ENST00000504571 PROCA1Q8NCQ7 364 aaPredicted RBP6.73□□□□□ -1.33
ATP2C1-206ENST00000504571 PRR14Q9BWN1 585 aa6.73□□□□□ -1.33
ATP2C1-206ENST00000504571 LIMD1Q9UGP4 676 aa6.72□□□□□ -1.33
ATP2C1-206ENST00000504571 FLIIQ13045 1269 aa6.71□□□□□ -1.34
ATP2C1-206ENST00000504571 FDX1P10109 184 aa6.7□□□□□ -1.34
ATP2C1-206ENST00000504571 NDUFV2P19404 249 aa6.7□□□□□ -1.34
ATP2C1-206ENST00000504571 ATP6V1AP38606 617 aa6.7□□□□□ -1.34
ATP2C1-206ENST00000504571 FUT2Q10981 343 aa6.7□□□□□ -1.34
ATP2C1-206ENST00000504571 PRPF38BQ5VTL8 546 aaKnown RBP6.7□□□□□ -1.34
ATP2C1-206ENST00000504571 PPP2R2DQ66LE6 453 aa6.7□□□□□ -1.34
ATP2C1-206ENST00000504571 ZMYND15Q9H091 742 aa6.7□□□□□ -1.34
ATP2C1-206ENST00000504571 ACTN4O43707 911 aaKnown RBP6.69□□□□□ -1.34
ATP2C1-206ENST00000504571 RGS20O76081 388 aa6.69□□□□□ -1.34
ATP2C1-206ENST00000504571 TJAP1Q5JTD0 557 aa6.69□□□□□ -1.34
ATP2C1-206ENST00000504571 LILRB3O75022 631 aa6.68□□□□□ -1.34
ATP2C1-206ENST00000504571 APLP1P51693 650 aa6.68□□□□□ -1.34
ATP2C1-206ENST00000504571 RFC5P40937 340 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms