RNA–Protein interactions for RNA: ENST00000504339.1

LINC02239-201, Transcript of long intergenic non-protein coding RNA 2239, humanhuman

TSL 1 (best) BASIC

Gene LINC02239, Length 2,290 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02239-201ENST00000504339 TMF1P82094 1093 aa12.36□□□□□ -0.43
LINC02239-201ENST00000504339 ADGRB3O60242 1522 aa12.36□□□□□ -0.43
LINC02239-201ENST00000504339 WASHC2CQ9Y4E1 1318 aa12.36□□□□□ -0.43
LINC02239-201ENST00000504339 PANK3Q9H999 370 aa12.35□□□□□ -0.43
LINC02239-201ENST00000504339 FAM69CQ0P6D2 419 aa12.35□□□□□ -0.43
LINC02239-201ENST00000504339 RALBP1Q15311 655 aa12.34□□□□□ -0.43
LINC02239-201ENST00000504339 NOS1P29475 1434 aa12.34□□□□□ -0.43
LINC02239-201ENST00000504339 IFT172Q9UG01 1749 aa12.34□□□□□ -0.43
LINC02239-201ENST00000504339 MYBBP1AQ9BQG0 1328 aaKnown RBP12.34□□□□□ -0.43
LINC02239-201ENST00000504339 KTN1Q86UP2 1357 aaKnown RBP12.34□□□□□ -0.43
LINC02239-201ENST00000504339 SIGLEC1Q9BZZ2 1709 aa12.34□□□□□ -0.43
LINC02239-201ENST00000504339 BCANQ96GW7 911 aa12.34□□□□□ -0.43
LINC02239-201ENST00000504339 LRPPRCP42704 1394 aaKnown RBP12.33□□□□□ -0.44
LINC02239-201ENST00000504339 DIP2BQ9P265 1576 aa12.33□□□□□ -0.44
LINC02239-201ENST00000504339 KIAA1210Q9ULL0 1709 aa12.32□□□□□ -0.44
LINC02239-201ENST00000504339 BRD4O60885 1362 aaPredicted RBP12.32□□□□□ -0.44
LINC02239-201ENST00000504339 TMC1Q8TDI8 760 aa12.32□□□□□ -0.44
LINC02239-201ENST00000504339 KIF1BO60333 1816 aa12.32□□□□□ -0.44
LINC02239-201ENST00000504339 CFAP65Q6ZU64 1925 aaKnown RBP12.31□□□□□ -0.44
LINC02239-201ENST00000504339 SENP3-EIF4A1A0A087X0R7 540 aa12.31□□□□□ -0.44
LINC02239-201ENST00000504339 SYNMO15061 1565 aa12.3□□□□□ -0.44
LINC02239-201ENST00000504339 CAMSAP1Q5T5Y3 1602 aa12.3□□□□□ -0.44
LINC02239-201ENST00000504339 CHGAP10645 457 aaKnown RBP12.3□□□□□ -0.44
LINC02239-201ENST00000504339 CC2D1BQ5T0F9 858 aaKnown RBP12.3□□□□□ -0.44
LINC02239-201ENST00000504339 ARHGAP31Q2M1Z3 1444 aa12.3□□□□□ -0.44
LINC02239-201ENST00000504339 PIK3C2GO75747 1445 aa12.29□□□□□ -0.44
LINC02239-201ENST00000504339 ZMYM4Q5VZL5 1548 aa12.29□□□□□ -0.44
LINC02239-201ENST00000504339 NLRP13Q86W25 1043 aa12.28□□□□□ -0.44
LINC02239-201ENST00000504339 PIK3C2BO00750 1634 aa12.28□□□□□ -0.44
LINC02239-201ENST00000504339 C14orf93Q9H972 538 aaKnown RBP12.28□□□□□ -0.44
LINC02239-201ENST00000504339 ERVK-7P63135 1459 aa12.28□□□□□ -0.44
LINC02239-201ENST00000504339 IDI1Q13907 227 aa12.27□□□□□ -0.44
LINC02239-201ENST00000504339 AMER1Q5JTC6 1135 aaPredicted RBP12.27□□□□□ -0.44
LINC02239-201ENST00000504339 ADGRB1O14514 1584 aa12.27□□□□□ -0.45
LINC02239-201ENST00000504339 NEFLP07196 543 aa12.26□□□□□ -0.45
LINC02239-201ENST00000504339 IRX6P78412 446 aaPredicted RBP12.26□□□□□ -0.45
LINC02239-201ENST00000504339 PPLO60437 1756 aa12.26□□□□□ -0.45
LINC02239-201ENST00000504339 TSHZ2Q9NRE2 1034 aa12.26□□□□□ -0.45
LINC02239-201ENST00000504339 EIF3AQ14152 1382 aaKnown RBP12.25□□□□□ -0.45
LINC02239-201ENST00000504339 RPGRIP1LQ68CZ1 1315 aa12.25□□□□□ -0.45
LINC02239-201ENST00000504339 MYOM1P52179 1685 aa12.25□□□□□ -0.45
LINC02239-201ENST00000504339 NUTM2DQ5VT03 806 aaPredicted RBP12.25□□□□□ -0.45
LINC02239-201ENST00000504339 TMEM132EQ6IEE7 984 aa12.25□□□□□ -0.45
LINC02239-201ENST00000504339 SETBP1Q9Y6X0 1596 aa12.25□□□□□ -0.45
LINC02239-201ENST00000504339 SMG6Q86US8 1419 aaKnown RBP12.24□□□□□ -0.45
LINC02239-201ENST00000504339 FBXO31Q5XUX0 539 aaPredicted RBP12.24□□□□□ -0.45
LINC02239-201ENST00000504339 NEXMIFQ5QGS0 1516 aa12.24□□□□□ -0.45
LINC02239-201ENST00000504339 TSPOAP1O95153 1857 aa12.23□□□□□ -0.45
LINC02239-201ENST00000504339 CDCA8Q53HL2 280 aa12.23□□□□□ -0.45
LINC02239-201ENST00000504339 CARD14Q9BXL6 1004 aa12.23□□□□□ -0.45
LINC02239-201ENST00000504339 TRAK1Q9UPV9 953 aa12.23□□□□□ -0.45
LINC02239-201ENST00000504339 SBNO2Q9Y2G9 1366 aa12.23□□□□□ -0.45
LINC02239-201ENST00000504339 ZC3H13Q5T200 1668 aaKnown RBP12.23□□□□□ -0.45
LINC02239-201ENST00000504339 MYO3AQ8NEV4 1616 aa12.22□□□□□ -0.45
LINC02239-201ENST00000504339 KNSTRNQ9Y448 316 aa12.21□□□□□ -0.45
LINC02239-201ENST00000504339 SLC52A1Q9NWF4 448 aa12.21□□□□□ -0.46
LINC02239-201ENST00000504339 CENPJQ9HC77 1338 aaPredicted RBP12.2□□□□□ -0.46
LINC02239-201ENST00000504339 PPP2R1AP30153 589 aa12.2□□□□□ -0.46
LINC02239-201ENST00000504339 NUDCQ9Y266 331 aa12.2□□□□□ -0.46
LINC02239-201ENST00000504339 REREQ9P2R6 1566 aa12.2□□□□□ -0.46
LINC02239-201ENST00000504339 PREX1Q8TCU6 1659 aa12.19□□□□□ -0.46
LINC02239-201ENST00000504339 AGLP35573 1532 aa12.19□□□□□ -0.46
LINC02239-201ENST00000504339 ASXL1Q8IXJ9 1541 aa12.19□□□□□ -0.46
LINC02239-201ENST00000504339 NPC1L1Q9UHC9 1359 aa12.19□□□□□ -0.46
LINC02239-201ENST00000504339 VGFO15240 615 aaPredicted RBP12.19□□□□□ -0.46
LINC02239-201ENST00000504339 RNF123Q5XPI4 1314 aa12.19□□□□□ -0.46
LINC02239-201ENST00000504339 ZFYVE9O95405 1425 aa12.19□□□□□ -0.46
LINC02239-201ENST00000504339 TMEM131LA2VDJ0 1609 aa12.18□□□□□ -0.46
LINC02239-201ENST00000504339 KDM5AP29375 1690 aaKnown RBP12.18□□□□□ -0.46
LINC02239-201ENST00000504339 BLMP54132 1417 aaPredicted RBP12.18□□□□□ -0.46
LINC02239-201ENST00000504339 INSRP06213 1382 aa12.17□□□□□ -0.46
LINC02239-201ENST00000504339 KIF13AQ9H1H9 1805 aa12.17□□□□□ -0.46
LINC02239-201ENST00000504339 SLC24A1O60721 1099 aa12.16□□□□□ -0.46
LINC02239-201ENST00000504339 ADAMTS8Q9UP79 889 aa12.16□□□□□ -0.46
LINC02239-201ENST00000504339 SALL2Q9Y467 1007 aaPredicted RBP12.16□□□□□ -0.46
LINC02239-201ENST00000504339 MYO5BQ9ULV0 1848 aa12.15□□□□□ -0.46
LINC02239-201ENST00000504339 SLC12A5Q9H2X9 1139 aa12.15□□□□□ -0.46
LINC02239-201ENST00000504339 QRICH2Q9H0J4 1663 aa12.14□□□□□ -0.47
LINC02239-201ENST00000504339 ERICH6BQ5W0A0 696 aa12.14□□□□□ -0.47
LINC02239-201ENST00000504339 PPP6R1Q9UPN7 881 aa12.14□□□□□ -0.47
LINC02239-201ENST00000504339 CDCA7LQ96GN5 454 aa12.13□□□□□ -0.47
LINC02239-201ENST00000504339 TULP4Q9NRJ4 1543 aa12.13□□□□□ -0.47
LINC02239-201ENST00000504339 MLECQ14165 292 aa12.13□□□□□ -0.47
LINC02239-201ENST00000504339 ARHGEF28Q8N1W1 1705 aaKnown RBP12.12□□□□□ -0.47
LINC02239-201ENST00000504339 ARHGEF40Q8TER5 1519 aa12.11□□□□□ -0.47
LINC02239-201ENST00000504339 CLTCQ00610 1675 aaKnown RBP12.11□□□□□ -0.47
LINC02239-201ENST00000504339 PPP4R2Q9NY27 417 aa12.11□□□□□ -0.47
LINC02239-201ENST00000504339 SPATA31D1Q6ZQQ2 1576 aa12.1□□□□□ -0.47
LINC02239-201ENST00000504339 A2ML1A8K2U0 1454 aa12.1□□□□□ -0.47
LINC02239-201ENST00000504339 PTPRMP28827 1452 aa12.1□□□□□ -0.47
LINC02239-201ENST00000504339 STK26Q9P289 416 aa12.1□□□□□ -0.47
LINC02239-201ENST00000504339 NSD3Q9BZ95 1437 aa12.09□□□□□ -0.47
LINC02239-201ENST00000504339 SAFB2Q14151 953 aaKnown RBP eCLIP12.09□□□□□ -0.47
LINC02239-201ENST00000504339 PUS7Q96PZ0 661 aaKnown RBP12.09□□□□□ -0.47
LINC02239-201ENST00000504339 CABP2Q9NPB3 220 aa12.09□□□□□ -0.47
LINC02239-201ENST00000504339 PLEKHH1Q9ULM0 1364 aa12.09□□□□□ -0.47
LINC02239-201ENST00000504339 PDE3BQ13370 1112 aa12.08□□□□□ -0.48
LINC02239-201ENST00000504339 B4GALNT3Q6L9W6 998 aa12.08□□□□□ -0.48
LINC02239-201ENST00000504339 PLPPR3Q6T4P5 718 aa12.08□□□□□ -0.48
LINC02239-201ENST00000504339 ALKQ9UM73 1620 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms