RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 SOWAHBA6NEL2 793 aa10.3□□□□□ -0.76
TRAPPC13-205ENST00000504243 SAMD7Q7Z3H4 446 aa10.3□□□□□ -0.76
TRAPPC13-205ENST00000504243 SWT1Q5T5J6 900 aaKnown RBP10.29□□□□□ -0.76
TRAPPC13-205ENST00000504243 THSD4Q6ZMP0 1018 aa10.29□□□□□ -0.76
TRAPPC13-205ENST00000504243 SLF2Q8IX21 1173 aa10.29□□□□□ -0.76
TRAPPC13-205ENST00000504243 NECTIN2Q92692 538 aa10.29□□□□□ -0.76
TRAPPC13-205ENST00000504243 PHOX2BQ99453 314 aa10.29□□□□□ -0.76
TRAPPC13-205ENST00000504243 DAXXQ9UER7 740 aaPredicted RBP10.28□□□□□ -0.76
TRAPPC13-205ENST00000504243 TRIM66O15016 1216 aa10.26□□□□□ -0.77
TRAPPC13-205ENST00000504243 CLCN1P35523 988 aa10.26□□□□□ -0.77
TRAPPC13-205ENST00000504243 BCAMP50895 628 aa10.26□□□□□ -0.77
TRAPPC13-205ENST00000504243 AMHR2Q16671 573 aa10.26□□□□□ -0.77
TRAPPC13-205ENST00000504243 RSPH4AQ5TD94 716 aa10.25□□□□□ -0.77
TRAPPC13-205ENST00000504243 HCSTQ9UBK5 93 aa10.25□□□□□ -0.77
TRAPPC13-205ENST00000504243 TSR3Q9UJK0 312 aaKnown RBP10.25□□□□□ -0.77
TRAPPC13-205ENST00000504243 GTF3C3Q9Y5Q9 886 aa10.25□□□□□ -0.77
TRAPPC13-205ENST00000504243 RNF40O75150 1001 aa10.24□□□□□ -0.77
TRAPPC13-205ENST00000504243 PPP4CP60510 307 aa10.24□□□□□ -0.77
TRAPPC13-205ENST00000504243 MDM2Q00987 491 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC13-205ENST00000504243 GPCPD1Q9NPB8 672 aa10.24□□□□□ -0.77
TRAPPC13-205ENST00000504243 PTPN5P54829 565 aa10.23□□□□□ -0.77
TRAPPC13-205ENST00000504243 SULF1Q8IWU6 871 aa10.23□□□□□ -0.77
TRAPPC13-205ENST00000504243 HPS5Q9UPZ3 1129 aa10.23□□□□□ -0.77
TRAPPC13-205ENST00000504243 NYAP1Q6ZVC0 841 aa10.22□□□□□ -0.77
TRAPPC13-205ENST00000504243 NLRP7Q8WX94 980 aa10.22□□□□□ -0.77
TRAPPC13-205ENST00000504243 GPBP1L1Q9HC44 474 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC13-205ENST00000504243 PLSCR2Q9NRY7 297 aa10.22□□□□□ -0.77
TRAPPC13-205ENST00000504243 TTLL12Q14166 644 aaPredicted RBP10.21□□□□□ -0.77
TRAPPC13-205ENST00000504243 PDE4DQ08499 809 aa10.2□□□□□ -0.78
TRAPPC13-205ENST00000504243 DDX11L8A8MPP1 907 aa10.19□□□□□ -0.78
TRAPPC13-205ENST00000504243 TMUB1Q9BVT8 246 aa10.19□□□□□ -0.78
TRAPPC13-205ENST00000504243 PRR14Q9BWN1 585 aa10.19□□□□□ -0.78
TRAPPC13-205ENST00000504243 WBP1LQ9NX94 342 aa10.19□□□□□ -0.78
TRAPPC13-205ENST00000504243 RDH13Q8NBN7 331 aa10.17□□□□□ -0.78
TRAPPC13-205ENST00000504243 KMT5BQ4FZB7 885 aa10.16□□□□□ -0.78
TRAPPC13-205ENST00000504243 IL27Q8NEV9 243 aa10.16□□□□□ -0.78
TRAPPC13-205ENST00000504243 KDM4CQ9H3R0 1056 aa10.16□□□□□ -0.78
TRAPPC13-205ENST00000504243 FAM217BQ9NTX9 383 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC13-205ENST00000504243 SLC10A3P09131 477 aa10.15□□□□□ -0.78
TRAPPC13-205ENST00000504243 GIGYF2Q6Y7W6 1299 aaKnown RBP10.15□□□□□ -0.78
TRAPPC13-205ENST00000504243 PARP9Q8IXQ6 854 aa10.15□□□□□ -0.78
TRAPPC13-205ENST00000504243 REPIN1Q9BWE0 567 aaKnown RBP10.15□□□□□ -0.78
TRAPPC13-205ENST00000504243 CD46P15529 392 aa10.14□□□□□ -0.79
TRAPPC13-205ENST00000504243 SSTR3P32745 418 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC13-205ENST00000504243 CFHP08603 1231 aa10.13□□□□□ -0.79
TRAPPC13-205ENST00000504243 GCGRP47871 477 aa10.11□□□□□ -0.79
TRAPPC13-205ENST00000504243 ACTN4O43707 911 aaKnown RBP10.1□□□□□ -0.79
TRAPPC13-205ENST00000504243 APLP1P51693 650 aa10.1□□□□□ -0.79
TRAPPC13-205ENST00000504243 MS4A1P11836 297 aa10.06□□□□□ -0.8
TRAPPC13-205ENST00000504243 GRIPAP1Q4V328 841 aa10.06□□□□□ -0.8
TRAPPC13-205ENST00000504243 BEGAINQ9BUH8 593 aa10.06□□□□□ -0.8
TRAPPC13-205ENST00000504243 PCDHB3Q9Y5E6 796 aa10.06□□□□□ -0.8
TRAPPC13-205ENST00000504243 KDM4AO75164 1064 aa10.05□□□□□ -0.8
TRAPPC13-205ENST00000504243 USP46P62068 366 aa10.05□□□□□ -0.8
TRAPPC13-205ENST00000504243 DIXDC1Q155Q3 683 aa10.05□□□□□ -0.8
TRAPPC13-205ENST00000504243 NUTM1Q86Y26 1132 aa10.05□□□□□ -0.8
TRAPPC13-205ENST00000504243 TIMELESSQ9UNS1 1208 aa10.05□□□□□ -0.8
TRAPPC13-205ENST00000504243 ATP6V1AP38606 617 aa10.04□□□□□ -0.8
TRAPPC13-205ENST00000504243 ERICH6Q7L0X2 663 aa10.04□□□□□ -0.8
TRAPPC13-205ENST00000504243 FAM117AQ9C073 453 aa10.04□□□□□ -0.8
TRAPPC13-205ENST00000504243 FUT2Q10981 343 aa10.03□□□□□ -0.8
TRAPPC13-205ENST00000504243 C14orf37Q86TY3 774 aa10.03□□□□□ -0.8
TRAPPC13-205ENST00000504243 DDRGK1Q96HY6 314 aa10.02□□□□□ -0.81
TRAPPC13-205ENST00000504243 IL21Q9HBE4 155 aa10.02□□□□□ -0.81
TRAPPC13-205ENST00000504243 ITGBL1O95965 494 aaPredicted RBP10.01□□□□□ -0.81
TRAPPC13-205ENST00000504243 MTRQ99707 1265 aa10.01□□□□□ -0.81
TRAPPC13-205ENST00000504243 NR1I2O75469 434 aa10□□□□□ -0.81
TRAPPC13-205ENST00000504243 KCNC4Q03721 635 aa10□□□□□ -0.81
TRAPPC13-205ENST00000504243 TJAP1Q5JTD0 557 aa10□□□□□ -0.81
TRAPPC13-205ENST00000504243 COPS2P61201 443 aa9.99□□□□□ -0.81
TRAPPC13-205ENST00000504243 BLOC1S3Q6QNY0 202 aa9.99□□□□□ -0.81
TRAPPC13-205ENST00000504243 SPIRE2Q8WWL2 714 aa9.99□□□□□ -0.81
TRAPPC13-205ENST00000504243 PUS10Q3MIT2 529 aaKnown RBP9.98□□□□□ -0.81
TRAPPC13-205ENST00000504243 MORN1Q5T089 497 aa9.98□□□□□ -0.81
TRAPPC13-205ENST00000504243 TBC1D2Q9BYX2 928 aa9.98□□□□□ -0.81
TRAPPC13-205ENST00000504243 RSPH6AQ9H0K4 717 aa9.98□□□□□ -0.81
TRAPPC13-205ENST00000504243 HOXA2O43364 376 aa9.97□□□□□ -0.81
TRAPPC13-205ENST00000504243 IFFO2Q5TF58 517 aa9.97□□□□□ -0.81
TRAPPC13-205ENST00000504243 PLA2G2EQ9NZK7 142 aa9.97□□□□□ -0.81
TRAPPC13-205ENST00000504243 ZPR1O75312 459 aa9.96□□□□□ -0.82
TRAPPC13-205ENST00000504243 SCUBE3Q8IX30 993 aa9.96□□□□□ -0.82
TRAPPC13-205ENST00000504243 ATP1B4Q9UN42 357 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC13-205ENST00000504243 Q3C1V9 767 aa9.95□□□□□ -0.82
TRAPPC13-205ENST00000504243 PLEKHG3A1L390 1219 aa9.94□□□□□ -0.82
TRAPPC13-205ENST00000504243 GJA5P36382 358 aa9.94□□□□□ -0.82
TRAPPC13-205ENST00000504243 SLC27A5Q9Y2P5 690 aa9.94□□□□□ -0.82
TRAPPC13-205ENST00000504243 SALL2Q9Y467 1007 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC13-205ENST00000504243 ZNF516Q92618 1163 aa9.93□□□□□ -0.82
TRAPPC13-205ENST00000504243 MOXD2PA6NHM9 499 aa9.92□□□□□ -0.82
TRAPPC13-205ENST00000504243 FMNL1O95466 1100 aaPredicted RBP9.92□□□□□ -0.82
TRAPPC13-205ENST00000504243 FDX1P10109 184 aa9.92□□□□□ -0.82
TRAPPC13-205ENST00000504243 MYSM1Q5VVJ2 828 aa9.91□□□□□ -0.82
TRAPPC13-205ENST00000504243 SPTLC1O15269 473 aa9.9□□□□□ -0.82
TRAPPC13-205ENST00000504243 NDUFV2P19404 249 aa9.9□□□□□ -0.82
TRAPPC13-205ENST00000504243 RSBN1LQ6PCB5 846 aaPredicted RBP9.9□□□□□ -0.82
TRAPPC13-205ENST00000504243 RIC3Q7Z5B4 369 aa9.9□□□□□ -0.82
TRAPPC13-205ENST00000504243 SH3D19Q5HYK7 790 aa9.89□□□□□ -0.83
TRAPPC13-205ENST00000504243 HLA-CQ95604 372 aa9.89□□□□□ -0.83
TRAPPC13-205ENST00000504243 SPSB2Q99619 263 aa9.89□□□□□ -0.83
TRAPPC13-205ENST00000504243 ADH1BP00325 375 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms