RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 KNSTRNQ9Y448 316 aa19.73■□□□□ 0.75
SNF8-203ENST00000504000 KIAA1210Q9ULL0 1709 aa19.72■□□□□ 0.75
SNF8-203ENST00000504000 NBR1Q14596 966 aa19.72■□□□□ 0.75
SNF8-203ENST00000504000 AMER1Q5JTC6 1135 aaPredicted RBP19.72■□□□□ 0.75
SNF8-203ENST00000504000 DEPDC5O75140 1603 aa19.71■□□□□ 0.75
SNF8-203ENST00000504000 PPP2R1AP30153 589 aa19.71■□□□□ 0.75
SNF8-203ENST00000504000 ADAMTS8Q9UP79 889 aa19.71■□□□□ 0.75
SNF8-203ENST00000504000 ASXL1Q8IXJ9 1541 aa19.71■□□□□ 0.75
SNF8-203ENST00000504000 CRBNQ96SW2 442 aa19.7■□□□□ 0.74
SNF8-203ENST00000504000 KDM2BQ8NHM5 1336 aa19.69■□□□□ 0.74
SNF8-203ENST00000504000 EIF3AQ14152 1382 aaKnown RBP19.68■□□□□ 0.74
SNF8-203ENST00000504000 DUSP27Q5VZP5 1158 aa19.68■□□□□ 0.74
SNF8-203ENST00000504000 TRAPPC8Q9Y2L5 1435 aa19.68■□□□□ 0.74
SNF8-203ENST00000504000 WDR43Q15061 677 aaKnown RBP eCLIP19.67■□□□□ 0.74
SNF8-203ENST00000504000 ZCCHC11Q5TAX3 1644 aaKnown RBP19.67■□□□□ 0.74
SNF8-203ENST00000504000 NGEFQ8N5V2 710 aa19.67■□□□□ 0.74
SNF8-203ENST00000504000 DDRGK1Q96HY6 314 aa19.67■□□□□ 0.74
SNF8-203ENST00000504000 TET3O43151 1660 aa19.66■□□□□ 0.74
SNF8-203ENST00000504000 PLIN1O60240 522 aa19.66■□□□□ 0.74
SNF8-203ENST00000504000 CENPQQ7L2Z9 268 aaPredicted RBP19.66■□□□□ 0.74
SNF8-203ENST00000504000 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.66■□□□□ 0.74
SNF8-203ENST00000504000 VWDEQ8N2E2 1590 aa19.66■□□□□ 0.74
SNF8-203ENST00000504000 PLEKHH1Q9ULM0 1364 aa19.65■□□□□ 0.74
SNF8-203ENST00000504000 ZFYVE16Q7Z3T8 1539 aa19.65■□□□□ 0.74
SNF8-203ENST00000504000 GOLGA2Q08379 1002 aa19.65■□□□□ 0.74
SNF8-203ENST00000504000 PPM1GO15355 546 aaPredicted RBP19.65■□□□□ 0.74
SNF8-203ENST00000504000 TRMT2AQ8IZ69 625 aaKnown RBP19.65■□□□□ 0.74
SNF8-203ENST00000504000 MYOM1P52179 1685 aa19.64■□□□□ 0.73
SNF8-203ENST00000504000 ERCC6L2Q5T890 1561 aa19.64■□□□□ 0.73
SNF8-203ENST00000504000 CLTCL1P53675 1640 aa19.63■□□□□ 0.73
SNF8-203ENST00000504000 SPAG9O60271 1321 aaKnown RBP19.63■□□□□ 0.73
SNF8-203ENST00000504000 SLFN5Q08AF3 891 aa19.61■□□□□ 0.73
SNF8-203ENST00000504000 MYOM2P54296 1465 aa19.6■□□□□ 0.73
SNF8-203ENST00000504000 KDM5AP29375 1690 aaKnown RBP19.6■□□□□ 0.73
SNF8-203ENST00000504000 NPM2Q86SE8 214 aaKnown RBP19.6■□□□□ 0.73
SNF8-203ENST00000504000 KANK1Q14678 1352 aa19.59■□□□□ 0.73
SNF8-203ENST00000504000 C20orf194Q5TEA3 1177 aa19.58■□□□□ 0.72
SNF8-203ENST00000504000 INO80Q9ULG1 1556 aaPredicted RBP19.57■□□□□ 0.72
SNF8-203ENST00000504000 SBNO2Q9Y2G9 1366 aa19.56■□□□□ 0.72
SNF8-203ENST00000504000 NKTRP30414 1462 aaKnown RBP19.56■□□□□ 0.72
SNF8-203ENST00000504000 MAP3K4Q9Y6R4 1608 aa19.55■□□□□ 0.72
SNF8-203ENST00000504000 ATP7AQ04656 1500 aa19.54■□□□□ 0.72
SNF8-203ENST00000504000 MYO3AQ8NEV4 1616 aa19.53■□□□□ 0.72
SNF8-203ENST00000504000 FAM161AQ3B820 660 aa19.53■□□□□ 0.72
SNF8-203ENST00000504000 E9PSI1 815 aa19.52■□□□□ 0.72
SNF8-203ENST00000504000 ABCA9Q8IUA7 1624 aa19.52■□□□□ 0.72
SNF8-203ENST00000504000 NINLQ9Y2I6 1382 aa19.52■□□□□ 0.72
SNF8-203ENST00000504000 ERVK-7P63135 1459 aa19.52■□□□□ 0.72
SNF8-203ENST00000504000 NEFMP07197 916 aa19.52■□□□□ 0.71
SNF8-203ENST00000504000 NRXN1Q9ULB1 1477 aa19.51■□□□□ 0.71
SNF8-203ENST00000504000 AFAP1Q8N556 730 aa19.5■□□□□ 0.71
SNF8-203ENST00000504000 POLR3AO14802 1390 aaPredicted RBP19.5■□□□□ 0.71
SNF8-203ENST00000504000 IFT172Q9UG01 1749 aa19.49■□□□□ 0.71
SNF8-203ENST00000504000 ABCA6Q8N139 1617 aa19.48■□□□□ 0.71
SNF8-203ENST00000504000 MROH1Q8NDA8 1641 aa19.48■□□□□ 0.71
SNF8-203ENST00000504000 SETBP1Q9Y6X0 1596 aa19.48■□□□□ 0.71
SNF8-203ENST00000504000 C8orf34Q49A92 452 aa19.48■□□□□ 0.71
SNF8-203ENST00000504000 LMTK2Q8IWU2 1503 aa19.47■□□□□ 0.71
SNF8-203ENST00000504000 PDE3AQ14432 1141 aa19.47■□□□□ 0.71
SNF8-203ENST00000504000 KIF1BO60333 1816 aa19.47■□□□□ 0.71
SNF8-203ENST00000504000 EFCAB6Q5THR3 1501 aa19.46■□□□□ 0.71
SNF8-203ENST00000504000 FANCAO15360 1455 aa19.46■□□□□ 0.71
SNF8-203ENST00000504000 APAF1O14727 1248 aa19.45■□□□□ 0.7
SNF8-203ENST00000504000 LAS1LQ9Y4W2 734 aaKnown RBP19.45■□□□□ 0.7
SNF8-203ENST00000504000 AAMPQ13685 434 aa19.45■□□□□ 0.7
SNF8-203ENST00000504000 CGNL1Q0VF96 1302 aa19.45■□□□□ 0.7
SNF8-203ENST00000504000 NCBP3Q53F19 620 aaKnown RBP19.43■□□□□ 0.7
SNF8-203ENST00000504000 CFAP70Q5T0N1 1121 aa19.42■□□□□ 0.7
SNF8-203ENST00000504000 CARD14Q9BXL6 1004 aa19.42■□□□□ 0.7
SNF8-203ENST00000504000 SPINK5Q9NQ38 1064 aaPredicted RBP19.42■□□□□ 0.7
SNF8-203ENST00000504000 KIF3BO15066 747 aa19.41■□□□□ 0.7
SNF8-203ENST00000504000 SKAP1Q86WV1 359 aa19.41■□□□□ 0.7
SNF8-203ENST00000504000 ADGRF5Q8IZF2 1346 aa19.4■□□□□ 0.7
SNF8-203ENST00000504000 CCDC146Q8IYE0 955 aa19.4■□□□□ 0.7
SNF8-203ENST00000504000 ADGRL1O94910 1474 aa19.4■□□□□ 0.7
SNF8-203ENST00000504000 DAXXQ9UER7 740 aaPredicted RBP19.39■□□□□ 0.7
SNF8-203ENST00000504000 ADGRB3O60242 1522 aa19.39■□□□□ 0.69
SNF8-203ENST00000504000 ZMYM3Q14202 1370 aa19.39■□□□□ 0.69
SNF8-203ENST00000504000 USP32Q8NFA0 1604 aa19.39■□□□□ 0.69
SNF8-203ENST00000504000 VIRMAQ69YN4 1812 aaKnown RBP19.37■□□□□ 0.69
SNF8-203ENST00000504000 WWC1Q8IX03 1113 aa19.37■□□□□ 0.69
SNF8-203ENST00000504000 MAPK8IP3Q9UPT6 1336 aa19.37■□□□□ 0.69
SNF8-203ENST00000504000 BCAR3O75815 825 aa19.37■□□□□ 0.69
SNF8-203ENST00000504000 PUS7Q96PZ0 661 aaKnown RBP19.37■□□□□ 0.69
SNF8-203ENST00000504000 PHF23Q9BUL5 403 aaPredicted RBP19.37■□□□□ 0.69
SNF8-203ENST00000504000 CENPJQ9HC77 1338 aaPredicted RBP19.36■□□□□ 0.69
SNF8-203ENST00000504000 UGGT1Q9NYU2 1555 aa19.36■□□□□ 0.69
SNF8-203ENST00000504000 NFKBIBQ15653 356 aa19.36■□□□□ 0.69
SNF8-203ENST00000504000 PPRC1Q5VV67 1664 aaKnown RBP19.36■□□□□ 0.69
SNF8-203ENST00000504000 MROH2AA6NES4 1674 aa19.35■□□□□ 0.69
SNF8-203ENST00000504000 SHPRHQ149N8 1683 aa19.35■□□□□ 0.69
SNF8-203ENST00000504000 ZC3H13Q5T200 1668 aaKnown RBP19.34■□□□□ 0.69
SNF8-203ENST00000504000 CCDC27Q2M243 656 aa19.34■□□□□ 0.69
SNF8-203ENST00000504000 CLUAP1Q96AJ1 413 aa19.34■□□□□ 0.69
SNF8-203ENST00000504000 KIDINS220Q9ULH0 1771 aa19.33■□□□□ 0.69
SNF8-203ENST00000504000 IQSEC2Q5JU85 1478 aa19.33■□□□□ 0.69
SNF8-203ENST00000504000 GSE1Q14687 1217 aa19.33■□□□□ 0.69
SNF8-203ENST00000504000 WDR63Q8IWG1 891 aa19.33■□□□□ 0.69
SNF8-203ENST00000504000 RUNDC1Q96C34 613 aa19.33■□□□□ 0.68
SNF8-203ENST00000504000 RPGRIP1LQ68CZ1 1315 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms