RNA–Protein interactions for RNA: ENST00000503937.5

SEC31A-213, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC31A, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-213ENST00000503937 DCAF11Q8TEB1 546 aa10.09□□□□□ -0.79
SEC31A-213ENST00000503937 PCF11O94913 1555 aaKnown RBP10.09□□□□□ -0.79
SEC31A-213ENST00000503937 LRPPRCP42704 1394 aaKnown RBP10.08□□□□□ -0.8
SEC31A-213ENST00000503937 HECW1Q76N89 1606 aa10.08□□□□□ -0.8
SEC31A-213ENST00000503937 ROCK2O75116 1388 aaKnown RBP10.07□□□□□ -0.8
SEC31A-213ENST00000503937 CLCN1P35523 988 aa10.07□□□□□ -0.8
SEC31A-213ENST00000503937 PNNQ9H307 717 aaKnown RBP10.07□□□□□ -0.8
SEC31A-213ENST00000503937 RRAGDQ9NQL2 400 aaPredicted RBP10.07□□□□□ -0.8
SEC31A-213ENST00000503937 PTPRKQ15262 1439 aa10.07□□□□□ -0.8
SEC31A-213ENST00000503937 EFCAB5A4FU69 1503 aa10.06□□□□□ -0.8
SEC31A-213ENST00000503937 CLASP1Q7Z460 1538 aa10.06□□□□□ -0.8
SEC31A-213ENST00000503937 FRAT2O75474 233 aaPredicted RBP10.06□□□□□ -0.8
SEC31A-213ENST00000503937 FAM161AQ3B820 660 aa10.06□□□□□ -0.8
SEC31A-213ENST00000503937 TMC1Q8TDI8 760 aa10.06□□□□□ -0.8
SEC31A-213ENST00000503937 KCNV2Q8TDN2 545 aa10.06□□□□□ -0.8
SEC31A-213ENST00000503937 L3MBTL2Q969R5 705 aa10.06□□□□□ -0.8
SEC31A-213ENST00000503937 WDR70Q9NW82 654 aa10.06□□□□□ -0.8
SEC31A-213ENST00000503937 PODXL2Q9NZ53 605 aa10.06□□□□□ -0.8
SEC31A-213ENST00000503937 BRD4O60885 1362 aaPredicted RBP10.06□□□□□ -0.8
SEC31A-213ENST00000503937 NAP1L5Q96NT1 182 aaPredicted RBP10.05□□□□□ -0.8
SEC31A-213ENST00000503937 INSRP06213 1382 aa10.04□□□□□ -0.8
SEC31A-213ENST00000503937 CENPJQ9HC77 1338 aaPredicted RBP10.04□□□□□ -0.8
SEC31A-213ENST00000503937 UGGT2Q9NYU1 1516 aa10.03□□□□□ -0.8
SEC31A-213ENST00000503937 RALBP1Q15311 655 aa10.03□□□□□ -0.8
SEC31A-213ENST00000503937 CENPQQ7L2Z9 268 aaPredicted RBP10.03□□□□□ -0.8
SEC31A-213ENST00000503937 MYOM3Q5VTT5 1437 aa10.02□□□□□ -0.8
SEC31A-213ENST00000503937 SHROOM2Q13796 1616 aa10.02□□□□□ -0.8
SEC31A-213ENST00000503937 TRPC6Q9Y210 931 aa10.02□□□□□ -0.81
SEC31A-213ENST00000503937 RPRD2Q5VT52 1461 aaKnown RBP10.02□□□□□ -0.81
SEC31A-213ENST00000503937 CARMIL2Q6F5E8 1435 aa10.02□□□□□ -0.81
SEC31A-213ENST00000503937 GALR2O43603 387 aaPredicted RBP10.01□□□□□ -0.81
SEC31A-213ENST00000503937 MS4A3Q96HJ5 214 aa10.01□□□□□ -0.81
SEC31A-213ENST00000503937 MS4A4AQ96JQ5 239 aa10.01□□□□□ -0.81
SEC31A-213ENST00000503937 MPHOSPH9Q99550 1183 aa10.01□□□□□ -0.81
SEC31A-213ENST00000503937 TMEM106CQ9BVX2 250 aa10.01□□□□□ -0.81
SEC31A-213ENST00000503937 KIF15Q9NS87 1388 aa10.01□□□□□ -0.81
SEC31A-213ENST00000503937 GCC2Q8IWJ2 1684 aa10.01□□□□□ -0.81
SEC31A-213ENST00000503937 DENND4BO75064 1496 aaPredicted RBP10.01□□□□□ -0.81
SEC31A-213ENST00000503937 TPM2P07951 284 aa10.01□□□□□ -0.81
SEC31A-213ENST00000503937 SLC4A3P48751 1232 aa10.01□□□□□ -0.81
SEC31A-213ENST00000503937 BECN1Q14457 450 aa10.01□□□□□ -0.81
SEC31A-213ENST00000503937 KDM2BQ8NHM5 1336 aa10□□□□□ -0.81
SEC31A-213ENST00000503937 MYBBP1AQ9BQG0 1328 aaKnown RBP10□□□□□ -0.81
SEC31A-213ENST00000503937 SAMD9Q5K651 1589 aa10□□□□□ -0.81
SEC31A-213ENST00000503937 MTUS2Q5JR59 1369 aa10□□□□□ -0.81
SEC31A-213ENST00000503937 NBPF8Q3BBV2 869 aa10□□□□□ -0.81
SEC31A-213ENST00000503937 JPH4Q96JJ6 628 aa10□□□□□ -0.81
SEC31A-213ENST00000503937 ATP1B4Q9UN42 357 aaPredicted RBP10□□□□□ -0.81
SEC31A-213ENST00000503937 KIAA0556O60303 1618 aa10□□□□□ -0.81
SEC31A-213ENST00000503937 ZMYM4Q5VZL5 1548 aa10□□□□□ -0.81
SEC31A-213ENST00000503937 PRG4Q92954 1404 aaPredicted RBP9.99□□□□□ -0.81
SEC31A-213ENST00000503937 TCOF1Q13428 1488 aaKnown RBP9.99□□□□□ -0.81
SEC31A-213ENST00000503937 TEX14Q8IWB6 1497 aa9.99□□□□□ -0.81
SEC31A-213ENST00000503937 ANKRD30BQ9BXX2 1392 aa9.98□□□□□ -0.81
SEC31A-213ENST00000503937 GOLGA6L3A6NEY3 463 aa9.98□□□□□ -0.81
SEC31A-213ENST00000503937 C8orf34Q49A92 452 aa9.98□□□□□ -0.81
SEC31A-213ENST00000503937 PDCL3Q9H2J4 239 aa9.98□□□□□ -0.81
SEC31A-213ENST00000503937 ISY1Q9ULR0 285 aaKnown RBP9.98□□□□□ -0.81
SEC31A-213ENST00000503937 FSD2A1L4K1 749 aa9.97□□□□□ -0.81
SEC31A-213ENST00000503937 CALD1Q05682 793 aaKnown RBP9.97□□□□□ -0.81
SEC31A-213ENST00000503937 CRBNQ96SW2 442 aa9.97□□□□□ -0.81
SEC31A-213ENST00000503937 GOLGA2Q08379 1002 aa9.97□□□□□ -0.81
SEC31A-213ENST00000503937 PLSCR2Q9NRY7 297 aa9.97□□□□□ -0.81
SEC31A-213ENST00000503937 POGKQ9P215 609 aa9.97□□□□□ -0.81
SEC31A-213ENST00000503937 PLEKHH2Q8IVE3 1493 aa9.96□□□□□ -0.81
SEC31A-213ENST00000503937 DISP1Q96F81 1524 aa9.96□□□□□ -0.82
SEC31A-213ENST00000503937 NCKAP5LQ9HCH0 1330 aa9.96□□□□□ -0.82
SEC31A-213ENST00000503937 FHOD3Q2V2M9 1422 aa9.95□□□□□ -0.82
SEC31A-213ENST00000503937 EHBP1L1Q8N3D4 1523 aa9.95□□□□□ -0.82
SEC31A-213ENST00000503937 SUPT6HQ7KZ85 1726 aaKnown RBP9.94□□□□□ -0.82
SEC31A-213ENST00000503937 XRCC6P12956 609 aaKnown RBP eCLIP9.94□□□□□ -0.82
SEC31A-213ENST00000503937 MRE11P49959 708 aa9.94□□□□□ -0.82
SEC31A-213ENST00000503937 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.94□□□□□ -0.82
SEC31A-213ENST00000503937 NLRP13Q86W25 1043 aa9.93□□□□□ -0.82
SEC31A-213ENST00000503937 USP47Q96K76 1375 aa9.93□□□□□ -0.82
SEC31A-213ENST00000503937 ARHGEF11O15085 1522 aa9.93□□□□□ -0.82
SEC31A-213ENST00000503937 E2F4Q16254 413 aa9.92□□□□□ -0.82
SEC31A-213ENST00000503937 ARHGEF1Q92888 912 aaKnown RBP9.92□□□□□ -0.82
SEC31A-213ENST00000503937 OTUD5Q96G74 571 aa9.92□□□□□ -0.82
SEC31A-213ENST00000503937 MAP7D2Q96T17 732 aa9.92□□□□□ -0.82
SEC31A-213ENST00000503937 RRP7BPQ9NSQ0 103 aa9.92□□□□□ -0.82
SEC31A-213ENST00000503937 ERCC6L2Q5T890 1561 aa9.92□□□□□ -0.82
SEC31A-213ENST00000503937 TTLL13PA6NNM8 815 aa9.92□□□□□ -0.82
SEC31A-213ENST00000503937 TIE1P35590 1138 aa9.92□□□□□ -0.82
SEC31A-213ENST00000503937 MKRN3Q13064 507 aaKnown RBP9.92□□□□□ -0.82
SEC31A-213ENST00000503937 RIMBP3CA6NJZ7 1639 aa9.91□□□□□ -0.82
SEC31A-213ENST00000503937 RIMBP3BA6NNM3 1639 aa9.91□□□□□ -0.82
SEC31A-213ENST00000503937 TERF1P54274 439 aa9.91□□□□□ -0.82
SEC31A-213ENST00000503937 ROCK1Q13464 1354 aa9.91□□□□□ -0.82
SEC31A-213ENST00000503937 MBD5Q9P267 1494 aa9.91□□□□□ -0.82
SEC31A-213ENST00000503937 RIMBP3Q9UFD9 1639 aa9.91□□□□□ -0.82
SEC31A-213ENST00000503937 PTPRGP23470 1445 aa9.9□□□□□ -0.82
SEC31A-213ENST00000503937 ESPNB1AK53 854 aa9.9□□□□□ -0.82
SEC31A-213ENST00000503937 CRISPLD2Q9H0B8 497 aa9.9□□□□□ -0.82
SEC31A-213ENST00000503937 CCDC144AA2RUR9 1427 aa9.89□□□□□ -0.83
SEC31A-213ENST00000503937 EIF3AQ14152 1382 aaKnown RBP9.89□□□□□ -0.83
SEC31A-213ENST00000503937 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.89□□□□□ -0.83
SEC31A-213ENST00000503937 ILDR1Q86SU0 546 aaPredicted RBP9.89□□□□□ -0.83
SEC31A-213ENST00000503937 LARP6Q9BRS8 491 aaKnown RBP9.89□□□□□ -0.83
SEC31A-213ENST00000503937 MYH16Q9H6N6 1097 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms