RNA–Protein interactions for RNA: ENST00000503678.5

SMN2-204, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-204ENST00000503678 TMUB1Q9BVT8 246 aa8.78□□□□□ -1
SMN2-204ENST00000503678 SMAPO00193 183 aa8.77□□□□□ -1.01
SMN2-204ENST00000503678 MAP3K7O43318 606 aa8.77□□□□□ -1.01
SMN2-204ENST00000503678 PRSS12P56730 875 aa8.77□□□□□ -1.01
SMN2-204ENST00000503678 TSR1Q2NL82 804 aaKnown RBP8.77□□□□□ -1.01
SMN2-204ENST00000503678 NKX2-3Q8TAU0 364 aa8.77□□□□□ -1.01
SMN2-204ENST00000503678 HDGFP51858 240 aaKnown RBP8.76□□□□□ -1.01
SMN2-204ENST00000503678 PDIA6Q15084 440 aa8.75□□□□□ -1.01
SMN2-204ENST00000503678 CERKQ8TCT0 537 aa8.75□□□□□ -1.01
SMN2-204ENST00000503678 TATDN2Q93075 761 aa8.75□□□□□ -1.01
SMN2-204ENST00000503678 APLP1P51693 650 aa8.74□□□□□ -1.01
SMN2-204ENST00000503678 FAM198AQ9UFP1 575 aa8.74□□□□□ -1.01
SMN2-204ENST00000503678 DGAT1O75907 488 aa8.72□□□□□ -1.01
SMN2-204ENST00000503678 TRIM67Q6ZTA4 783 aa8.72□□□□□ -1.01
SMN2-204ENST00000503678 NECTIN2Q92692 538 aa8.72□□□□□ -1.01
SMN2-204ENST00000503678 GPBP1L1Q9HC44 474 aaPredicted RBP8.72□□□□□ -1.01
SMN2-204ENST00000503678 PNMA3Q9UL41 463 aa8.72□□□□□ -1.01
SMN2-204ENST00000503678 NBPF26B4DH59 902 aa8.71□□□□□ -1.02
SMN2-204ENST00000503678 C3orf80F5H4A9 247 aa8.71□□□□□ -1.02
SMN2-204ENST00000503678 MYT1Q01538 1121 aa8.71□□□□□ -1.02
SMN2-204ENST00000503678 KDM4CQ9H3R0 1056 aa8.71□□□□□ -1.02
SMN2-204ENST00000503678 GRXCR2A6NFK2 248 aa8.7□□□□□ -1.02
SMN2-204ENST00000503678 TRIM66O15016 1216 aa8.7□□□□□ -1.02
SMN2-204ENST00000503678 SLC19A1P41440 591 aa8.69□□□□□ -1.02
SMN2-204ENST00000503678 PDE4DQ08499 809 aa8.69□□□□□ -1.02
SMN2-204ENST00000503678 PKDCCQ504Y2 493 aa8.69□□□□□ -1.02
SMN2-204ENST00000503678 POTECB2RU33 542 aa8.68□□□□□ -1.02
SMN2-204ENST00000503678 SUPT5HO00267 1087 aaKnown RBP8.67□□□□□ -1.02
SMN2-204ENST00000503678 RNF40O75150 1001 aa8.67□□□□□ -1.02
SMN2-204ENST00000503678 ZPR1O75312 459 aa8.67□□□□□ -1.02
SMN2-204ENST00000503678 COPS2P61201 443 aa8.67□□□□□ -1.02
SMN2-204ENST00000503678 NUDT18Q6ZVK8 323 aa8.67□□□□□ -1.02
SMN2-204ENST00000503678 IL27Q8NEV9 243 aa8.67□□□□□ -1.02
SMN2-204ENST00000503678 GPR37O15354 613 aa8.66□□□□□ -1.02
SMN2-204ENST00000503678 PRR20EP86478 221 aa8.66□□□□□ -1.02
SMN2-204ENST00000503678 PRR20CP86479 221 aa8.66□□□□□ -1.02
SMN2-204ENST00000503678 PRR20DP86480 221 aa8.66□□□□□ -1.02
SMN2-204ENST00000503678 PRR20BP86481 221 aa8.66□□□□□ -1.02
SMN2-204ENST00000503678 PRR20AP86496 221 aa8.66□□□□□ -1.02
SMN2-204ENST00000503678 TREML4Q6UXN2 200 aa8.66□□□□□ -1.02
SMN2-204ENST00000503678 SPRYD7Q5W111 196 aa8.65□□□□□ -1.02
SMN2-204ENST00000503678 MINK1Q8N4C8 1332 aaPredicted RBP8.64□□□□□ -1.03
SMN2-204ENST00000503678 RNF223E7ERA6 249 aa8.64□□□□□ -1.03
SMN2-204ENST00000503678 LCE2AQ5TA79 106 aaPredicted RBP8.64□□□□□ -1.03
SMN2-204ENST00000503678 ZNF598Q86UK7 904 aaKnown RBP8.64□□□□□ -1.03
SMN2-204ENST00000503678 SLF2Q8IX21 1173 aa8.64□□□□□ -1.03
SMN2-204ENST00000503678 RBM27Q9P2N5 1060 aaKnown RBP8.64□□□□□ -1.03
SMN2-204ENST00000503678 EMID1Q96A84 441 aaPredicted RBP8.63□□□□□ -1.03
SMN2-204ENST00000503678 PRIM1P49642 420 aaKnown RBP8.61□□□□□ -1.03
SMN2-204ENST00000503678 MAP2K5Q13163 448 aa8.61□□□□□ -1.03
SMN2-204ENST00000503678 SWT1Q5T5J6 900 aaKnown RBP8.61□□□□□ -1.03
SMN2-204ENST00000503678 PRR14Q9BWN1 585 aa8.61□□□□□ -1.03
SMN2-204ENST00000503678 ZMYND15Q9H091 742 aa8.61□□□□□ -1.03
SMN2-204ENST00000503678 SLC4A3P48751 1232 aa8.6□□□□□ -1.03
SMN2-204ENST00000503678 OSBPP22059 807 aa8.59□□□□□ -1.03
SMN2-204ENST00000503678 ANKLE1Q8NAG6 615 aa8.59□□□□□ -1.03
SMN2-204ENST00000503678 DDRGK1Q96HY6 314 aa8.59□□□□□ -1.03
SMN2-204ENST00000503678 NUTM2FA1L443 756 aa8.58□□□□□ -1.04
SMN2-204ENST00000503678 AMHR2Q16671 573 aa8.58□□□□□ -1.04
SMN2-204ENST00000503678 TTC13Q8NBP0 860 aa8.58□□□□□ -1.04
SMN2-204ENST00000503678 CCDC102AQ96A19 550 aa8.58□□□□□ -1.04
SMN2-204ENST00000503678 RSPH6AQ9H0K4 717 aa8.58□□□□□ -1.04
SMN2-204ENST00000503678 PCDHB3Q9Y5E6 796 aa8.58□□□□□ -1.04
SMN2-204ENST00000503678 IRF6O14896 467 aa8.57□□□□□ -1.04
SMN2-204ENST00000503678 GNPATO15228 680 aa8.57□□□□□ -1.04
SMN2-204ENST00000503678 GDF9O60383 454 aa8.57□□□□□ -1.04
SMN2-204ENST00000503678 HIC1Q14526 733 aa8.57□□□□□ -1.04
SMN2-204ENST00000503678 FAM117AQ9C073 453 aa8.57□□□□□ -1.04
SMN2-204ENST00000503678 CDHR5Q9HBB8 845 aa8.57□□□□□ -1.04
SMN2-204ENST00000503678 FAM187AA6NFU0 413 aa8.56□□□□□ -1.04
SMN2-204ENST00000503678 ZNF697Q5TEC3 545 aa8.56□□□□□ -1.04
SMN2-204ENST00000503678 LIAT1Q6ZQX7 453 aa8.56□□□□□ -1.04
SMN2-204ENST00000503678 FCHSD2O94868 740 aa8.55□□□□□ -1.04
SMN2-204ENST00000503678 AAASQ9NRG9 546 aa8.55□□□□□ -1.04
SMN2-204ENST00000503678 BLOC1S3Q6QNY0 202 aa8.54□□□□□ -1.04
SMN2-204ENST00000503678 PLEKHG3A1L390 1219 aa8.53□□□□□ -1.04
SMN2-204ENST00000503678 PARP9Q8IXQ6 854 aa8.53□□□□□ -1.04
SMN2-204ENST00000503678 EYA1Q99502 592 aa8.53□□□□□ -1.04
SMN2-204ENST00000503678 TNFRSF10AO00220 468 aa8.52□□□□□ -1.05
SMN2-204ENST00000503678 PPEF1O14829 653 aaPredicted RBP8.52□□□□□ -1.05
SMN2-204ENST00000503678 GOPCQ9HD26 462 aa8.52□□□□□ -1.05
SMN2-204ENST00000503678 ST8SIA5O15466 376 aa8.51□□□□□ -1.05
SMN2-204ENST00000503678 NPDC1Q9NQX5 325 aaPredicted RBP8.51□□□□□ -1.05
SMN2-204ENST00000503678 STK17AQ9UEE5 414 aa8.51□□□□□ -1.05
SMN2-204ENST00000503678 S1PR4O95977 384 aa8.5□□□□□ -1.05
SMN2-204ENST00000503678 PADI6Q6TGC4 694 aa8.5□□□□□ -1.05
SMN2-204ENST00000503678 WFS1O76024 890 aa8.49□□□□□ -1.05
SMN2-204ENST00000503678 FLIIQ13045 1269 aa8.49□□□□□ -1.05
SMN2-204ENST00000503678 CRIPAKQ8N1N5 446 aa8.49□□□□□ -1.05
SMN2-204ENST00000503678 TTLL12Q14166 644 aaPredicted RBP8.48□□□□□ -1.05
SMN2-204ENST00000503678 ACTN4O43707 911 aaKnown RBP8.47□□□□□ -1.05
SMN2-204ENST00000503678 TLL1O43897 1013 aa8.47□□□□□ -1.05
SMN2-204ENST00000503678 FECHP22830 423 aa8.47□□□□□ -1.05
SMN2-204ENST00000503678 PTGDRQ13258 359 aa8.47□□□□□ -1.05
SMN2-204ENST00000503678 WIPF1O43516 503 aa8.45□□□□□ -1.06
SMN2-204ENST00000503678 INSM1Q01101 510 aaPredicted RBP8.45□□□□□ -1.06
SMN2-204ENST00000503678 ADH1BP00325 375 aa8.44□□□□□ -1.06
SMN2-204ENST00000503678 AVPP01185 164 aa8.44□□□□□ -1.06
SMN2-204ENST00000503678 KMT5BQ4FZB7 885 aa8.44□□□□□ -1.06
SMN2-204ENST00000503678 PKD2L1Q9P0L9 805 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms