RNA–Protein interactions for RNA: ENST00000503473.5

MXD3-205, Transcript of MAX dimerization protein 3, human

TSL 5

Gene MXD3, Length 2,279 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MXD3-205	ENST00000503473	SPHKAP	Q2M3C7	1700 aa		33.73	■■■□□ 2.99
MXD3-205	ENST00000503473	ASXL1	Q8IXJ9	1541 aa		33.72	■■■□□ 2.99
MXD3-205	ENST00000503473	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	33.72	■■■□□ 2.99	5e-8	■■■□□ 14.8
MXD3-205	ENST00000503473	EIF3A	Q14152	1382 aa	Known RBP	33.72	■■■□□ 2.99
MXD3-205	ENST00000503473	KNSTRN	Q9Y448	316 aa		33.71	■■■□□ 2.99
MXD3-205	ENST00000503473	GOLGA2	Q08379	1002 aa		33.7	■■■□□ 2.99
MXD3-205	ENST00000503473	ABCC2	Q92887	1545 aa		33.7	■■■□□ 2.99
MXD3-205	ENST00000503473	NPC1L1	Q9UHC9	1359 aa		33.7	■■■□□ 2.99
MXD3-205	ENST00000503473	MYOM1	P52179	1685 aa		33.7	■■■□□ 2.98
MXD3-205	ENST00000503473	AMER1	Q5JTC6	1135 aa	Predicted RBP	33.69	■■■□□ 2.98
MXD3-205	ENST00000503473	CDCA8	Q53HL2	280 aa		33.68	■■■□□ 2.98
MXD3-205	ENST00000503473	VIRMA	Q69YN4	1812 aa	Known RBP	33.68	■■■□□ 2.98
MXD3-205	ENST00000503473	C8orf34	Q49A92	452 aa		33.67	■■■□□ 2.98
MXD3-205	ENST00000503473	CEP152	O94986	1710 aa		33.67	■■■□□ 2.98
MXD3-205	ENST00000503473	SCAPER	Q9BY12	1400 aa		33.66	■■■□□ 2.98
MXD3-205	ENST00000503473	NFKBIB	Q15653	356 aa		33.66	■■■□□ 2.98
MXD3-205	ENST00000503473	SCAF11	Q99590	1463 aa	Known RBP	33.65	■■■□□ 2.98
MXD3-205	ENST00000503473	GSE1	Q14687	1217 aa		33.65	■■■□□ 2.98
MXD3-205	ENST00000503473	DAXX	Q9UER7	740 aa	Predicted RBP	33.64	■■■□□ 2.98
MXD3-205	ENST00000503473	SLFN5	Q08AF3	891 aa		33.63	■■■□□ 2.97
MXD3-205	ENST00000503473	TRPM2	O94759	1503 aa		33.63	■■■□□ 2.97
MXD3-205	ENST00000503473	TRMT2A	Q8IZ69	625 aa	Known RBP	33.63	■■■□□ 2.97
MXD3-205	ENST00000503473	STAC3	Q96MF2	364 aa		33.62	■■■□□ 2.97
MXD3-205	ENST00000503473	KIAA1210	Q9ULL0	1709 aa		33.59	■■■□□ 2.97
MXD3-205	ENST00000503473	NKTR	P30414	1462 aa	Known RBP	33.59	■■■□□ 2.97
MXD3-205	ENST00000503473	KDM5A	P29375	1690 aa	Known RBP	33.59	■■■□□ 2.97
MXD3-205	ENST00000503473	SHROOM2	Q13796	1616 aa		33.54	■■■□□ 2.96
MXD3-205	ENST00000503473	ABCC1	P33527	1531 aa		33.52	■■■□□ 2.96
MXD3-205	ENST00000503473	NGEF	Q8N5V2	710 aa		33.51	■■■□□ 2.95
MXD3-205	ENST00000503473	SLC4A3	P48751	1232 aa		33.5	■■■□□ 2.95
MXD3-205	ENST00000503473	PTPRT	O14522	1441 aa		33.5	■■■□□ 2.95
MXD3-205	ENST00000503473	CLTCL1	P53675	1640 aa		33.49	■■■□□ 2.95
MXD3-205	ENST00000503473	NEURL4	Q96JN8	1562 aa		33.49	■■■□□ 2.95
MXD3-205	ENST00000503473	NINL	Q9Y2I6	1382 aa		33.48	■■■□□ 2.95
MXD3-205	ENST00000503473	PLCH2	O75038	1416 aa		33.47	■■■□□ 2.95
MXD3-205	ENST00000503473	DEPDC5	O75140	1603 aa		33.47	■■■□□ 2.95
MXD3-205	ENST00000503473	ANO8	Q9HCE9	1232 aa	Predicted RBP	33.45	■■■□□ 2.95
MXD3-205	ENST00000503473		E9PSI1	815 aa		33.45	■■■□□ 2.94
MXD3-205	ENST00000503473	TET3	O43151	1660 aa		33.44	■■■□□ 2.94
MXD3-205	ENST00000503473	RTN4	Q9NQC3	1192 aa	Known RBP	33.44	■■■□□ 2.94
MXD3-205	ENST00000503473	FRAT1	Q92837	279 aa	Predicted RBP	33.43	■■■□□ 2.94
MXD3-205	ENST00000503473	RGS3	P49796	1198 aa		33.41	■■■□□ 2.94
MXD3-205	ENST00000503473	SLC24A1	O60721	1099 aa		33.4	■■■□□ 2.94
MXD3-205	ENST00000503473	CHD1	O14646	1710 aa		33.4	■■■□□ 2.94
MXD3-205	ENST00000503473	CGNL1	Q0VF96	1302 aa		33.4	■■■□□ 2.94
MXD3-205	ENST00000503473	RTEL1-TNFRSF6B	F6WH68	1400 aa		33.38	■■■□□ 2.93
MXD3-205	ENST00000503473	PDE3A	Q14432	1141 aa		33.37	■■■□□ 2.93
MXD3-205	ENST00000503473	CCDC146	Q8IYE0	955 aa		33.37	■■■□□ 2.93
MXD3-205	ENST00000503473	SPINK5	Q9NQ38	1064 aa	Predicted RBP	33.37	■■■□□ 2.93
MXD3-205	ENST00000503473	BRPF3	Q9ULD4	1205 aa		33.37	■■■□□ 2.93
MXD3-205	ENST00000503473	APAF1	O14727	1248 aa		33.37	■■■□□ 2.93
MXD3-205	ENST00000503473	ZFYVE16	Q7Z3T8	1539 aa		33.35	■■■□□ 2.93
MXD3-205	ENST00000503473	MAPK8IP3	Q9UPT6	1336 aa		33.34	■■■□□ 2.93
MXD3-205	ENST00000503473	TRAPPC8	Q9Y2L5	1435 aa		33.34	■■■□□ 2.93
MXD3-205	ENST00000503473	EFCAB2	Q5VUJ9	269 aa		33.34	■■■□□ 2.93
MXD3-205	ENST00000503473	BCAR3	O75815	825 aa		33.33	■■■□□ 2.93
MXD3-205	ENST00000503473	ERVK-7	P63135	1459 aa		33.33	■■■□□ 2.93
MXD3-205	ENST00000503473	MYOM2	P54296	1465 aa		33.33	■■■□□ 2.93
MXD3-205	ENST00000503473	VWDE	Q8N2E2	1590 aa		33.32	■■■□□ 2.92
MXD3-205	ENST00000503473	MAP3K4	Q9Y6R4	1608 aa		33.32	■■■□□ 2.92
MXD3-205	ENST00000503473	MYO3A	Q8NEV4	1616 aa		33.31	■■■□□ 2.92
MXD3-205	ENST00000503473	FRAT2	O75474	233 aa	Predicted RBP	33.3	■■■□□ 2.92
MXD3-205	ENST00000503473	ARAP3	Q8WWN8	1544 aa		33.3	■■■□□ 2.92
MXD3-205	ENST00000503473	ZCCHC11	Q5TAX3	1644 aa	Known RBP	33.3	■■■□□ 2.92
MXD3-205	ENST00000503473	ABCA6	Q8N139	1617 aa		33.3	■■■□□ 2.92
MXD3-205	ENST00000503473	USP19	O94966	1318 aa		33.3	■■■□□ 2.92
MXD3-205	ENST00000503473	POLR3A	O14802	1390 aa	Predicted RBP	33.28	■■■□□ 2.92
MXD3-205	ENST00000503473	ZMYM3	Q14202	1370 aa		33.28	■■■□□ 2.92
MXD3-205	ENST00000503473	IGHD	P01880	384 aa		33.27	■■■□□ 2.92
MXD3-205	ENST00000503473	CENPJ	Q9HC77	1338 aa	Predicted RBP	33.26	■■■□□ 2.91
MXD3-205	ENST00000503473	CLUAP1	Q96AJ1	413 aa		33.26	■■■□□ 2.91
MXD3-205	ENST00000503473	IFT172	Q9UG01	1749 aa		33.26	■■■□□ 2.91
MXD3-205	ENST00000503473	AAMP	Q13685	434 aa		33.25	■■■□□ 2.91
MXD3-205	ENST00000503473	SHPRH	Q149N8	1683 aa		33.25	■■■□□ 2.91
MXD3-205	ENST00000503473	NLRP1	Q9C000	1473 aa		33.23	■■■□□ 2.91
MXD3-205	ENST00000503473	SPAG9	O60271	1321 aa	Known RBP	33.22	■■■□□ 2.91
MXD3-205	ENST00000503473	SBNO2	Q9Y2G9	1366 aa		33.22	■■■□□ 2.91
MXD3-205	ENST00000503473	DMRT2	Q9Y5R5	561 aa		33.21	■■■□□ 2.91
MXD3-205	ENST00000503473	ERCC6L2	Q5T890	1561 aa		33.21	■■■□□ 2.91
MXD3-205	ENST00000503473	UHRF1BP1L	A0JNW5	1464 aa		33.2	■■■□□ 2.91
MXD3-205	ENST00000503473	BECN1	Q14457	450 aa		33.19	■■■□□ 2.9
MXD3-205	ENST00000503473	KIF1B	O60333	1816 aa		33.19	■■■□□ 2.9
MXD3-205	ENST00000503473	INO80	Q9ULG1	1556 aa	Predicted RBP	33.19	■■■□□ 2.9
MXD3-205	ENST00000503473	KANK1	Q14678	1352 aa		33.18	■■■□□ 2.9
MXD3-205	ENST00000503473	WWC1	Q8IX03	1113 aa		33.17	■■■□□ 2.9
MXD3-205	ENST00000503473	CARD14	Q9BXL6	1004 aa		33.17	■■■□□ 2.9
MXD3-205	ENST00000503473	IQSEC2	Q5JU85	1478 aa		33.17	■■■□□ 2.9
MXD3-205	ENST00000503473	CANX	P27824	592 aa	Known RBP	33.14	■■■□□ 2.9
MXD3-205	ENST00000503473	NRXN1	Q9ULB1	1477 aa		33.14	■■■□□ 2.9
MXD3-205	ENST00000503473	PMFBP1	Q8TBY8	1022 aa		33.13	■■■□□ 2.89
MXD3-205	ENST00000503473	ATP7A	Q04656	1500 aa		33.13	■■■□□ 2.89
MXD3-205	ENST00000503473	COG6	Q9Y2V7	657 aa		33.12	■■■□□ 2.89
MXD3-205	ENST00000503473	USP32	Q8NFA0	1604 aa		33.12	■■■□□ 2.89
MXD3-205	ENST00000503473	PANK1	Q8TE04	598 aa		33.11	■■■□□ 2.89
MXD3-205	ENST00000503473	SETBP1	Q9Y6X0	1596 aa		33.11	■■■□□ 2.89
MXD3-205	ENST00000503473	ZC3H13	Q5T200	1668 aa	Known RBP	33.1	■■■□□ 2.89
MXD3-205	ENST00000503473	MROH1	Q8NDA8	1641 aa		33.1	■■■□□ 2.89
MXD3-205	ENST00000503473	SEC24B	O95487	1268 aa		33.08	■■■□□ 2.89
MXD3-205	ENST00000503473	CFAP70	Q5T0N1	1121 aa		33.08	■■■□□ 2.89
MXD3-205	ENST00000503473	FAM43A	Q8N2R8	423 aa		33.08	■■■□□ 2.89

Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms