RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 COPS2P61201 443 aa7.05□□□□□ -1.28
HMGB1P35-201ENST00000503360 MYT1Q01538 1121 aa7.05□□□□□ -1.28
HMGB1P35-201ENST00000503360 PKDCCQ504Y2 493 aa7.05□□□□□ -1.28
HMGB1P35-201ENST00000503360 PADI6Q6TGC4 694 aa7.05□□□□□ -1.28
HMGB1P35-201ENST00000503360 WDR70Q9NW82 654 aa7.05□□□□□ -1.28
HMGB1P35-201ENST00000503360 LMOD2Q6P5Q4 547 aa7.04□□□□□ -1.28
HMGB1P35-201ENST00000503360 SPRYD3Q8NCJ5 442 aa7.04□□□□□ -1.28
HMGB1P35-201ENST00000503360 EMID1Q96A84 441 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P35-201ENST00000503360 ACTN4O43707 911 aaKnown RBP7.02□□□□□ -1.29
HMGB1P35-201ENST00000503360 DNAJB2P25686 324 aa7.02□□□□□ -1.29
HMGB1P35-201ENST00000503360 KMT5BQ4FZB7 885 aa7.01□□□□□ -1.29
HMGB1P35-201ENST00000503360 BLOC1S3Q6QNY0 202 aa7.01□□□□□ -1.29
HMGB1P35-201ENST00000503360 GDF9O60383 454 aa7□□□□□ -1.29
HMGB1P35-201ENST00000503360 TMEM134Q9H6X4 195 aa7□□□□□ -1.29
HMGB1P35-201ENST00000503360 LCE2AQ5TA79 106 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P35-201ENST00000503360 CRIPAKQ8N1N5 446 aa6.99□□□□□ -1.29
HMGB1P35-201ENST00000503360 RBM46Q8TBY0 533 aaKnown RBP6.99□□□□□ -1.29
HMGB1P35-201ENST00000503360 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P35-201ENST00000503360 ADH1BP00325 375 aa6.98□□□□□ -1.29
HMGB1P35-201ENST00000503360 ZNF697Q5TEC3 545 aa6.98□□□□□ -1.29
HMGB1P35-201ENST00000503360 TREML4Q6UXN2 200 aa6.98□□□□□ -1.29
HMGB1P35-201ENST00000503360 NR1I2O75469 434 aa6.97□□□□□ -1.29
HMGB1P35-201ENST00000503360 LIAT1Q6ZQX7 453 aa6.97□□□□□ -1.29
HMGB1P35-201ENST00000503360 PTGDRQ13258 359 aa6.95□□□□□ -1.3
HMGB1P35-201ENST00000503360 ADGRG1Q9Y653 693 aa6.95□□□□□ -1.3
HMGB1P35-201ENST00000503360 FAM187AA6NFU0 413 aa6.94□□□□□ -1.3
HMGB1P35-201ENST00000503360 TLL1O43897 1013 aa6.94□□□□□ -1.3
HMGB1P35-201ENST00000503360 S1PR4O95977 384 aa6.94□□□□□ -1.3
HMGB1P35-201ENST00000503360 AVPP01185 164 aa6.94□□□□□ -1.3
HMGB1P35-201ENST00000503360 ARHGEF1Q92888 912 aaKnown RBP6.94□□□□□ -1.3
HMGB1P35-201ENST00000503360 AAASQ9NRG9 546 aa6.94□□□□□ -1.3
HMGB1P35-201ENST00000503360 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.93□□□□□ -1.3
HMGB1P35-201ENST00000503360 POTECB2RU33 542 aa6.93□□□□□ -1.3
HMGB1P35-201ENST00000503360 RPIAP49247 311 aa6.93□□□□□ -1.3
HMGB1P35-201ENST00000503360 SLC6A16Q9GZN6 736 aa6.93□□□□□ -1.3
HMGB1P35-201ENST00000503360 RCCD1A6NED2 376 aa6.92□□□□□ -1.3
HMGB1P35-201ENST00000503360 CFHP08603 1231 aa6.92□□□□□ -1.3
HMGB1P35-201ENST00000503360 CTC1Q2NKJ3 1217 aa6.91□□□□□ -1.3
HMGB1P35-201ENST00000503360 PPEF1O14829 653 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P35-201ENST00000503360 SMCPP49901 116 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P35-201ENST00000503360 RSPH4AQ5TD94 716 aa6.9□□□□□ -1.3
HMGB1P35-201ENST00000503360 PKD2L1Q9P0L9 805 aa6.9□□□□□ -1.3
HMGB1P35-201ENST00000503360 TNFRSF10AO00220 468 aa6.89□□□□□ -1.31
HMGB1P35-201ENST00000503360 SLC10A3P09131 477 aa6.89□□□□□ -1.31
HMGB1P35-201ENST00000503360 SCUBE3Q8IX30 993 aa6.89□□□□□ -1.31
HMGB1P35-201ENST00000503360 TOR4AQ9NXH8 423 aa6.89□□□□□ -1.31
HMGB1P35-201ENST00000503360 OATP04181 439 aa6.88□□□□□ -1.31
HMGB1P35-201ENST00000503360 PLA2G2CQ5R387 149 aa6.88□□□□□ -1.31
HMGB1P35-201ENST00000503360 WIPF1O43516 503 aa6.87□□□□□ -1.31
HMGB1P35-201ENST00000503360 CD2BP2O95400 341 aaKnown RBP6.87□□□□□ -1.31
HMGB1P35-201ENST00000503360 SPSB2Q99619 263 aa6.87□□□□□ -1.31
HMGB1P35-201ENST00000503360 STK17AQ9UEE5 414 aa6.87□□□□□ -1.31
HMGB1P35-201ENST00000503360 SALL2Q9Y467 1007 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P35-201ENST00000503360 ST8SIA5O15466 376 aa6.86□□□□□ -1.31
HMGB1P35-201ENST00000503360 PXYLP1Q8TE99 480 aa6.86□□□□□ -1.31
HMGB1P35-201ENST00000503360 WFS1O76024 890 aa6.85□□□□□ -1.31
HMGB1P35-201ENST00000503360 AXIN1O15169 862 aa6.84□□□□□ -1.31
HMGB1P35-201ENST00000503360 FCHSD2O94868 740 aa6.84□□□□□ -1.31
HMGB1P35-201ENST00000503360 MLLT3P42568 568 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P35-201ENST00000503360 INSM1Q01101 510 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P35-201ENST00000503360 PAXIP1Q6ZW49 1069 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P35-201ENST00000503360 C11orf95C9JLR9 678 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P35-201ENST00000503360 NFX1Q12986 1120 aaKnown RBP6.82□□□□□ -1.32
HMGB1P35-201ENST00000503360 CYP4X1Q8N118 509 aa6.82□□□□□ -1.32
HMGB1P35-201ENST00000503360 THAP11Q96EK4 314 aa6.82□□□□□ -1.32
HMGB1P35-201ENST00000503360 MORN1Q5T089 497 aa6.81□□□□□ -1.32
HMGB1P35-201ENST00000503360 CFAP44Q96MT7 982 aa6.81□□□□□ -1.32
HMGB1P35-201ENST00000503360 NUTM2FA1L443 756 aa6.8□□□□□ -1.32
HMGB1P35-201ENST00000503360 FOXC1Q12948 553 aa6.8□□□□□ -1.32
HMGB1P35-201ENST00000503360 HIC1Q14526 733 aa6.8□□□□□ -1.32
HMGB1P35-201ENST00000503360 METTL3Q86U44 580 aaKnown RBP6.8□□□□□ -1.32
HMGB1P35-201ENST00000503360 FMNL1O95466 1100 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P35-201ENST00000503360 ATP6V1AP38606 617 aa6.79□□□□□ -1.32
HMGB1P35-201ENST00000503360 GMPR2Q9P2T1 348 aaKnown RBP6.79□□□□□ -1.32
HMGB1P35-201ENST00000503360 DAXXQ9UER7 740 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P35-201ENST00000503360 FCF1Q9Y324 198 aaKnown RBP6.79□□□□□ -1.32
HMGB1P35-201ENST00000503360 WNT7AO00755 349 aa6.78□□□□□ -1.32
HMGB1P35-201ENST00000503360 MSS51Q4VC12 460 aa6.78□□□□□ -1.32
HMGB1P35-201ENST00000503360 KCNV2Q8TDN2 545 aa6.78□□□□□ -1.32
HMGB1P35-201ENST00000503360 SENP2Q9HC62 589 aa6.78□□□□□ -1.32
HMGB1P35-201ENST00000503360 DACH1Q9UI36 760 aa6.78□□□□□ -1.32
HMGB1P35-201ENST00000503360 FAM161AQ3B820 660 aa6.77□□□□□ -1.33
HMGB1P35-201ENST00000503360 PUS10Q3MIT2 529 aaKnown RBP6.77□□□□□ -1.33
HMGB1P35-201ENST00000503360 P3H3Q8IVL6 736 aa6.77□□□□□ -1.33
HMGB1P35-201ENST00000503360 FAM160A2Q8N612 972 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P35-201ENST00000503360 BRICD5Q6PL45 260 aa6.76□□□□□ -1.33
HMGB1P35-201ENST00000503360 SULF1Q8IWU6 871 aa6.76□□□□□ -1.33
HMGB1P35-201ENST00000503360 SNIP1Q8TAD8 396 aaKnown RBP6.76□□□□□ -1.33
HMGB1P35-201ENST00000503360 ZBTB24O43167 697 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P35-201ENST00000503360 KIFC2Q96AC6 838 aa6.75□□□□□ -1.33
HMGB1P35-201ENST00000503360 TRIM47Q96LD4 638 aa6.75□□□□□ -1.33
HMGB1P35-201ENST00000503360 TTC24A2A3L6 582 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P35-201ENST00000503360 TERTO14746 1132 aaKnown RBP6.74□□□□□ -1.33
HMGB1P35-201ENST00000503360 GCGRP47871 477 aa6.74□□□□□ -1.33
HMGB1P35-201ENST00000503360 FUT2Q10981 343 aa6.74□□□□□ -1.33
HMGB1P35-201ENST00000503360 REPIN1Q9BWE0 567 aaKnown RBP6.74□□□□□ -1.33
HMGB1P35-201ENST00000503360 SMPD1P17405 629 aa6.73□□□□□ -1.33
HMGB1P35-201ENST00000503360 GRIPAP1Q4V328 841 aa6.73□□□□□ -1.33
HMGB1P35-201ENST00000503360 ATP13A2Q9NQ11 1180 aa6.73□□□□□ -1.33
HMGB1P35-201ENST00000503360 SLC27A5Q9Y2P5 690 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms