RNA–Protein interactions for RNA: ENST00000503248.1

PHF3-206, Transcript of PHD finger protein 3, humanhuman

TSL 3

Gene PHF3, Length 529 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-206ENST00000503248 TMEM134Q9H6X4 195 aa8.98□□□□□ -0.97
PHF3-206ENST00000503248 TMUB1Q9BVT8 246 aa8.97□□□□□ -0.97
PHF3-206ENST00000503248 KDM4CQ9H3R0 1056 aa8.97□□□□□ -0.97
PHF3-206ENST00000503248 MDM2Q00987 491 aaPredicted RBP8.96□□□□□ -0.98
PHF3-206ENST00000503248 GIGYF2Q6Y7W6 1299 aaKnown RBP8.96□□□□□ -0.98
PHF3-206ENST00000503248 GOLGA8CPA6NN73 597 aa8.95□□□□□ -0.98
PHF3-206ENST00000503248 HRO43593 1189 aa8.95□□□□□ -0.98
PHF3-206ENST00000503248 DIXDC1Q155Q3 683 aa8.95□□□□□ -0.98
PHF3-206ENST00000503248 TMEM132AQ24JP5 1023 aa8.95□□□□□ -0.98
PHF3-206ENST00000503248 FAM161AQ3B820 660 aa8.95□□□□□ -0.98
PHF3-206ENST00000503248 SLF2Q8IX21 1173 aa8.95□□□□□ -0.98
PHF3-206ENST00000503248 PHOX2BQ99453 314 aa8.94□□□□□ -0.98
PHF3-206ENST00000503248 FAM217BQ9NTX9 383 aaPredicted RBP8.93□□□□□ -0.98
PHF3-206ENST00000503248 ANKK1Q8NFD2 765 aa8.92□□□□□ -0.98
PHF3-206ENST00000503248 ZFRQ96KR1 1074 aaKnown RBP8.92□□□□□ -0.98
PHF3-206ENST00000503248 HCSTQ9UBK5 93 aa8.92□□□□□ -0.98
PHF3-206ENST00000503248 SEPT9Q9UHD8 586 aaPredicted RBP8.92□□□□□ -0.98
PHF3-206ENST00000503248 SMAPO00193 183 aa8.91□□□□□ -0.98
PHF3-206ENST00000503248 SSTR3P32745 418 aaPredicted RBP8.91□□□□□ -0.98
PHF3-206ENST00000503248 LRCH3Q96II8 777 aa8.91□□□□□ -0.98
PHF3-206ENST00000503248 PRR14Q9BWN1 585 aa8.91□□□□□ -0.98
PHF3-206ENST00000503248 RSPH6AQ9H0K4 717 aa8.91□□□□□ -0.98
PHF3-206ENST00000503248 GPBP1L1Q9HC44 474 aaPredicted RBP8.91□□□□□ -0.98
PHF3-206ENST00000503248 IRX2Q9BZI1 471 aaPredicted RBP8.89□□□□□ -0.99
PHF3-206ENST00000503248 GOPCQ9HD26 462 aa8.89□□□□□ -0.99
PHF3-206ENST00000503248 C3orf80F5H4A9 247 aa8.88□□□□□ -0.99
PHF3-206ENST00000503248 SWT1Q5T5J6 900 aaKnown RBP8.88□□□□□ -0.99
PHF3-206ENST00000503248 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.88□□□□□ -0.99
PHF3-206ENST00000503248 USP46P62068 366 aa8.87□□□□□ -0.99
PHF3-206ENST00000503248 DDX11L8A8MPP1 907 aa8.86□□□□□ -0.99
PHF3-206ENST00000503248 CD46P15529 392 aa8.86□□□□□ -0.99
PHF3-206ENST00000503248 NYAP1Q6ZVC0 841 aa8.86□□□□□ -0.99
PHF3-206ENST00000503248 SAMD7Q7Z3H4 446 aa8.86□□□□□ -0.99
PHF3-206ENST00000503248 SOWAHBA6NEL2 793 aa8.85□□□□□ -0.99
PHF3-206ENST00000503248 MS4A1P11836 297 aa8.85□□□□□ -0.99
PHF3-206ENST00000503248 GRIPAP1Q4V328 841 aa8.85□□□□□ -0.99
PHF3-206ENST00000503248 RDH13Q8NBN7 331 aa8.85□□□□□ -0.99
PHF3-206ENST00000503248 WNT2BQ93097 391 aa8.85□□□□□ -0.99
PHF3-206ENST00000503248 BEGAINQ9BUH8 593 aa8.85□□□□□ -0.99
PHF3-206ENST00000503248 REPIN1Q9BWE0 567 aaKnown RBP8.85□□□□□ -0.99
PHF3-206ENST00000503248 GJA5P36382 358 aa8.84□□□□□ -0.99
PHF3-206ENST00000503248 KMT5BQ4FZB7 885 aa8.84□□□□□ -0.99
PHF3-206ENST00000503248 NUTM1Q86Y26 1132 aa8.83□□□□□ -1
PHF3-206ENST00000503248 NLRP7Q8WX94 980 aa8.83□□□□□ -1
PHF3-206ENST00000503248 FAM117AQ9C073 453 aa8.83□□□□□ -1
PHF3-206ENST00000503248 TSR3Q9UJK0 312 aaKnown RBP8.83□□□□□ -1
PHF3-206ENST00000503248 GCGRP47871 477 aa8.81□□□□□ -1
PHF3-206ENST00000503248 PPP4CP60510 307 aa8.81□□□□□ -1
PHF3-206ENST00000503248 SH3D19Q5HYK7 790 aa8.81□□□□□ -1
PHF3-206ENST00000503248 IL27Q8NEV9 243 aa8.81□□□□□ -1
PHF3-206ENST00000503248 RNF40O75150 1001 aa8.8□□□□□ -1
PHF3-206ENST00000503248 KDM4AO75164 1064 aa8.79□□□□□ -1
PHF3-206ENST00000503248 PLEKHG3A1L390 1219 aa8.78□□□□□ -1
PHF3-206ENST00000503248 RGS20O76081 388 aa8.78□□□□□ -1
PHF3-206ENST00000503248 CFHP08603 1231 aa8.78□□□□□ -1
PHF3-206ENST00000503248 SKIV2LQ15477 1246 aaKnown RBP8.78□□□□□ -1
PHF3-206ENST00000503248 TUSC1Q2TAM9 212 aa8.78□□□□□ -1
PHF3-206ENST00000503248 THSD4Q6ZMP0 1018 aa8.78□□□□□ -1
PHF3-206ENST00000503248 HPS5Q9UPZ3 1129 aa8.78□□□□□ -1
PHF3-206ENST00000503248 SLC10A3P09131 477 aa8.77□□□□□ -1.01
PHF3-206ENST00000503248 PCMTD1Q96MG8 357 aaPredicted RBP8.77□□□□□ -1.01
PHF3-206ENST00000503248 TBC1D2Q9BYX2 928 aa8.77□□□□□ -1.01
PHF3-206ENST00000503248 ACTN4O43707 911 aaKnown RBP8.76□□□□□ -1.01
PHF3-206ENST00000503248 ATP6V1AP38606 617 aa8.75□□□□□ -1.01
PHF3-206ENST00000503248 SPIRE2Q8WWL2 714 aa8.75□□□□□ -1.01
PHF3-206ENST00000503248 KCTD12Q96CX2 325 aaKnown RBP8.75□□□□□ -1.01
PHF3-206ENST00000503248 MYSM1Q5VVJ2 828 aa8.74□□□□□ -1.01
PHF3-206ENST00000503248 SPTLC1O15269 473 aa8.73□□□□□ -1.01
PHF3-206ENST00000503248 CLK2P49760 499 aaKnown RBP8.73□□□□□ -1.01
PHF3-206ENST00000503248 BCAMP50895 628 aa8.73□□□□□ -1.01
PHF3-206ENST00000503248 ERICH6Q7L0X2 663 aa8.73□□□□□ -1.01
PHF3-206ENST00000503248 HOXA2O43364 376 aa8.72□□□□□ -1.01
PHF3-206ENST00000503248 Q3C1V9 767 aa8.72□□□□□ -1.01
PHF3-206ENST00000503248 PRPF38BQ5VTL8 546 aaKnown RBP8.72□□□□□ -1.01
PHF3-206ENST00000503248 SPDYE5A6NIY4 337 aa8.71□□□□□ -1.02
PHF3-206ENST00000503248 RSBN1LQ6PCB5 846 aaPredicted RBP8.71□□□□□ -1.02
PHF3-206ENST00000503248 RIC3Q7Z5B4 369 aa8.71□□□□□ -1.02
PHF3-206ENST00000503248 NR1I2O75469 434 aa8.7□□□□□ -1.02
PHF3-206ENST00000503248 SALL2Q9Y467 1007 aaPredicted RBP8.7□□□□□ -1.02
PHF3-206ENST00000503248 FUT2Q10981 343 aa8.69□□□□□ -1.02
PHF3-206ENST00000503248 WBP1LQ9NX94 342 aa8.69□□□□□ -1.02
PHF3-206ENST00000503248 PCDHB3Q9Y5E6 796 aa8.69□□□□□ -1.02
PHF3-206ENST00000503248 FDX1P10109 184 aa8.68□□□□□ -1.02
PHF3-206ENST00000503248 ATP1B4Q9UN42 357 aaPredicted RBP8.68□□□□□ -1.02
PHF3-206ENST00000503248 MOXD2PA6NHM9 499 aa8.67□□□□□ -1.02
PHF3-206ENST00000503248 APLP1P51693 650 aa8.67□□□□□ -1.02
PHF3-206ENST00000503248 MORN1Q5T089 497 aa8.67□□□□□ -1.02
PHF3-206ENST00000503248 ZBTB3Q9H5J0 574 aa8.67□□□□□ -1.02
PHF3-206ENST00000503248 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.66□□□□□ -1.02
PHF3-206ENST00000503248 POLR3EQ9NVU0 708 aa8.66□□□□□ -1.02
PHF3-206ENST00000503248 PPP2R2DQ66LE6 453 aa8.65□□□□□ -1.02
PHF3-206ENST00000503248 PTPN5P54829 565 aa8.64□□□□□ -1.03
PHF3-206ENST00000503248 Q6ZNB5 142 aa8.64□□□□□ -1.03
PHF3-206ENST00000503248 FMNL1O95466 1100 aaPredicted RBP8.63□□□□□ -1.03
PHF3-206ENST00000503248 MTMR2Q13614 643 aa8.63□□□□□ -1.03
PHF3-206ENST00000503248 TMEM259Q4ZIN3 620 aa8.63□□□□□ -1.03
PHF3-206ENST00000503248 GTF3C3Q9Y5Q9 886 aa8.63□□□□□ -1.03
PHF3-206ENST00000503248 APBB1O00213 710 aa8.62□□□□□ -1.03
PHF3-206ENST00000503248 LILRB3O75022 631 aa8.62□□□□□ -1.03
PHF3-206ENST00000503248 NDUFV2P19404 249 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms