RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 BCANQ96GW7 911 aa16.49■□□□□ 0.23
SNCA-207ENST00000502987 ANKRD50Q9ULJ7 1429 aa16.47■□□□□ 0.23
SNCA-207ENST00000502987 SLIT1O75093 1534 aa16.47■□□□□ 0.23
SNCA-207ENST00000502987 ITGAEP38570 1179 aa16.47■□□□□ 0.23
SNCA-207ENST00000502987 PPARGC1BQ86YN6 1023 aaKnown RBP16.47■□□□□ 0.23
SNCA-207ENST00000502987 ADGRL2O95490 1459 aa16.47■□□□□ 0.23
SNCA-207ENST00000502987 LMTK2Q8IWU2 1503 aa16.46■□□□□ 0.23
SNCA-207ENST00000502987 TMEM2Q9UHN6 1383 aa16.46■□□□□ 0.23
SNCA-207ENST00000502987 ARHGAP23Q9P227 1491 aa16.46■□□□□ 0.23
SNCA-207ENST00000502987 LRRC7Q96NW7 1537 aa16.45■□□□□ 0.22
SNCA-207ENST00000502987 EFCAB6Q5THR3 1501 aa16.45■□□□□ 0.22
SNCA-207ENST00000502987 SOCS7O14512 581 aa16.44■□□□□ 0.22
SNCA-207ENST00000502987 SLC52A1Q9NWF4 448 aa16.44■□□□□ 0.22
SNCA-207ENST00000502987 SLC26A8Q96RN1 970 aa16.43■□□□□ 0.22
SNCA-207ENST00000502987 SYNMO15061 1565 aa16.43■□□□□ 0.22
SNCA-207ENST00000502987 CHGAP10645 457 aaKnown RBP16.42■□□□□ 0.22
SNCA-207ENST00000502987 KDM5AP29375 1690 aaKnown RBP16.42■□□□□ 0.22
SNCA-207ENST00000502987 NOS1P29475 1434 aa16.41■□□□□ 0.22
SNCA-207ENST00000502987 PPP1R15AO75807 674 aaPredicted RBP16.39■□□□□ 0.21
SNCA-207ENST00000502987 HDGFP51858 240 aaKnown RBP16.39■□□□□ 0.21
SNCA-207ENST00000502987 PROSER2Q86WR7 435 aaPredicted RBP16.39■□□□□ 0.21
SNCA-207ENST00000502987 MYO5BQ9ULV0 1848 aa16.38■□□□□ 0.21
SNCA-207ENST00000502987 TET3O43151 1660 aa16.38■□□□□ 0.21
SNCA-207ENST00000502987 RPRD2Q5VT52 1461 aaKnown RBP16.38■□□□□ 0.21
SNCA-207ENST00000502987 ADGRB3O60242 1522 aa16.38■□□□□ 0.21
SNCA-207ENST00000502987 MYCNP04198 464 aaPredicted RBP16.37■□□□□ 0.21
SNCA-207ENST00000502987 KCNA6P17658 529 aa16.37■□□□□ 0.21
SNCA-207ENST00000502987 ALKQ9UM73 1620 aa16.37■□□□□ 0.21
SNCA-207ENST00000502987 GCC2Q8IWJ2 1684 aa16.37■□□□□ 0.21
SNCA-207ENST00000502987 XIRP1Q702N8 1843 aaKnown RBP16.36■□□□□ 0.21
SNCA-207ENST00000502987 RBM33Q96EV2 1170 aaKnown RBP16.36■□□□□ 0.21
SNCA-207ENST00000502987 MED1Q15648 1581 aaPredicted RBP16.35■□□□□ 0.21
SNCA-207ENST00000502987 ROCK1Q13464 1354 aa16.35■□□□□ 0.21
SNCA-207ENST00000502987 UNC13BO14795 1591 aa16.34■□□□□ 0.21
SNCA-207ENST00000502987 NUTM2DQ5VT03 806 aaPredicted RBP16.33■□□□□ 0.2
SNCA-207ENST00000502987 NUP155O75694 1391 aa16.33■□□□□ 0.2
SNCA-207ENST00000502987 TMEM94Q12767 1356 aa16.33■□□□□ 0.2
SNCA-207ENST00000502987 E9PCH4 1651 aa16.32■□□□□ 0.2
SNCA-207ENST00000502987 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.32■□□□□ 0.2
SNCA-207ENST00000502987 RIMS2Q9UQ26 1411 aa16.32■□□□□ 0.2
SNCA-207ENST00000502987 TMEM131LA2VDJ0 1609 aa16.3■□□□□ 0.2
SNCA-207ENST00000502987 C14orf37Q86TY3 774 aa16.29■□□□□ 0.2
SNCA-207ENST00000502987 IQGAP3Q86VI3 1631 aa16.29■□□□□ 0.2
SNCA-207ENST00000502987 PLEKHG1Q9ULL1 1385 aa16.28■□□□□ 0.2
SNCA-207ENST00000502987 ZFYVE9O95405 1425 aa16.28■□□□□ 0.2
SNCA-207ENST00000502987 MSH6P52701 1360 aa16.26■□□□□ 0.19
SNCA-207ENST00000502987 CHD2O14647 1828 aaKnown RBP16.26■□□□□ 0.19
SNCA-207ENST00000502987 TBX22Q9Y458 520 aa16.26■□□□□ 0.19
SNCA-207ENST00000502987 NKTRP30414 1462 aaKnown RBP16.25■□□□□ 0.19
SNCA-207ENST00000502987 ZNF326Q5BKZ1 582 aaKnown RBP16.25■□□□□ 0.19
SNCA-207ENST00000502987 SLC4A1APQ9BWU0 796 aaKnown RBP16.25■□□□□ 0.19
SNCA-207ENST00000502987 FAM135BQ49AJ0 1406 aa16.25■□□□□ 0.19
SNCA-207ENST00000502987 POLA2Q14181 598 aa16.24■□□□□ 0.19
SNCA-207ENST00000502987 NWD1Q149M9 1564 aa16.23■□□□□ 0.19
SNCA-207ENST00000502987 SLAIN2Q9P270 581 aa16.23■□□□□ 0.19
SNCA-207ENST00000502987 ROBO1Q9Y6N7 1651 aa16.23■□□□□ 0.19
SNCA-207ENST00000502987 SPHKAPQ2M3C7 1700 aa16.2■□□□□ 0.18
SNCA-207ENST00000502987 TRIM52Q96A61 297 aa16.2■□□□□ 0.18
SNCA-207ENST00000502987 ATF3P18847 181 aa16.18■□□□□ 0.18
SNCA-207ENST00000502987 AMOTL2Q9Y2J4 779 aa16.18■□□□□ 0.18
SNCA-207ENST00000502987 ADAMTS13Q76LX8 1427 aa16.17■□□□□ 0.18
SNCA-207ENST00000502987 DIP2AQ14689 1571 aa16.17■□□□□ 0.18
SNCA-207ENST00000502987 PHLPP1O60346 1717 aa16.16■□□□□ 0.18
SNCA-207ENST00000502987 RRBP1Q9P2E9 1410 aaKnown RBP16.16■□□□□ 0.18
SNCA-207ENST00000502987 PIK3R4Q99570 1358 aa16.15■□□□□ 0.18
SNCA-207ENST00000502987 TRPM2O94759 1503 aa16.15■□□□□ 0.18
SNCA-207ENST00000502987 CADPS2Q86UW7 1296 aa16.15■□□□□ 0.18
SNCA-207ENST00000502987 C19orf44Q9H6X5 657 aa16.15■□□□□ 0.18
SNCA-207ENST00000502987 NCOA3Q9Y6Q9 1424 aa16.14■□□□□ 0.17
SNCA-207ENST00000502987 RBM42Q9BTD8 480 aaKnown RBP16.14■□□□□ 0.17
SNCA-207ENST00000502987 KIF1BO60333 1816 aa16.14■□□□□ 0.17
SNCA-207ENST00000502987 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.14■□□□□ 0.17
SNCA-207ENST00000502987 NAIPQ13075 1403 aa16.13■□□□□ 0.17
SNCA-207ENST00000502987 FOXD4L1Q9NU39 408 aa16.12■□□□□ 0.17
SNCA-207ENST00000502987 RGS17Q9UGC6 210 aaPredicted RBP16.12■□□□□ 0.17
SNCA-207ENST00000502987 PTPRUQ92729 1446 aa16.11■□□□□ 0.17
SNCA-207ENST00000502987 CLTCL1P53675 1640 aa16.1■□□□□ 0.17
SNCA-207ENST00000502987 JCADQ9P266 1359 aa16.1■□□□□ 0.17
SNCA-207ENST00000502987 MEX3CQ5U5Q3 659 aaKnown RBP16.08■□□□□ 0.16
SNCA-207ENST00000502987 ATF5Q9Y2D1 282 aaPredicted RBP16.08■□□□□ 0.16
SNCA-207ENST00000502987 POTEAQ6S8J7 498 aa16.07■□□□□ 0.16
SNCA-207ENST00000502987 SETBP1Q9Y6X0 1596 aa16.07■□□□□ 0.16
SNCA-207ENST00000502987 NRXN3Q9Y4C0 1643 aa16.06■□□□□ 0.16
SNCA-207ENST00000502987 METP08581 1390 aa16.06■□□□□ 0.16
SNCA-207ENST00000502987 VGFO15240 615 aaPredicted RBP16.06■□□□□ 0.16
SNCA-207ENST00000502987 HFM1A2PYH4 1435 aa16.05■□□□□ 0.16
SNCA-207ENST00000502987 NEXMIFQ5QGS0 1516 aa16.04■□□□□ 0.16
SNCA-207ENST00000502987 BRINP3Q76B58 766 aa16.04■□□□□ 0.16
SNCA-207ENST00000502987 COL16A1Q07092 1604 aaPredicted RBP16.04■□□□□ 0.16
SNCA-207ENST00000502987 XRN1Q8IZH2 1706 aaKnown RBP16.03■□□□□ 0.16
SNCA-207ENST00000502987 NUTM2BA6NNL0 878 aaPredicted RBP16.02■□□□□ 0.16
SNCA-207ENST00000502987 NUTM2EB1AL46 878 aaPredicted RBP16.02■□□□□ 0.16
SNCA-207ENST00000502987 NUTM2AQ8IVF1 878 aaPredicted RBP16.02■□□□□ 0.16
SNCA-207ENST00000502987 SPATA31A6Q5VVP1 1343 aa16.01■□□□□ 0.15
SNCA-207ENST00000502987 RPGRIP1LQ68CZ1 1315 aa16■□□□□ 0.15
SNCA-207ENST00000502987 AHDC1Q5TGY3 1603 aaPredicted RBP16■□□□□ 0.15
SNCA-207ENST00000502987 DCCP43146 1447 aa16■□□□□ 0.15
SNCA-207ENST00000502987 RGL3Q3MIN7 710 aa15.99■□□□□ 0.15
SNCA-207ENST00000502987 MST1RQ04912 1400 aa15.97■□□□□ 0.15
SNCA-207ENST00000502987 ADGRL3Q9HAR2 1447 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms