RNA–Protein interactions for RNA: ENST00000502254.5

PTPN20-212, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-212ENST00000502254 ZNF644Q9H582 1327 aaPredicted RBP8.38□□□□□ -1.07
PTPN20-212ENST00000502254 RBM26Q5T8P6 1007 aaKnown RBP8.38□□□□□ -1.07
PTPN20-212ENST00000502254 GPATCH8Q9UKJ3 1502 aaKnown RBP8.38□□□□□ -1.07
PTPN20-212ENST00000502254 FAM69CQ0P6D2 419 aa8.37□□□□□ -1.07
PTPN20-212ENST00000502254 TMEM92Q6UXU6 159 aa8.37□□□□□ -1.07
PTPN20-212ENST00000502254 COLQQ9Y215 455 aaPredicted RBP8.37□□□□□ -1.07
PTPN20-212ENST00000502254 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.37□□□□□ -1.07
PTPN20-212ENST00000502254 G3V3G9 751 aa8.36□□□□□ -1.07
PTPN20-212ENST00000502254 EFCAB2Q5VUJ9 269 aa8.36□□□□□ -1.07
PTPN20-212ENST00000502254 GTF3C3Q9Y5Q9 886 aa8.36□□□□□ -1.07
PTPN20-212ENST00000502254 MIA2Q96PC5 1412 aa8.36□□□□□ -1.07
PTPN20-212ENST00000502254 TTC37Q6PGP7 1564 aa8.35□□□□□ -1.07
PTPN20-212ENST00000502254 POTEFA5A3E0 1075 aa8.35□□□□□ -1.07
PTPN20-212ENST00000502254 HNRNPMP52272 730 aaKnown RBP eCLIP8.35□□□□□ -1.07
PTPN20-212ENST00000502254 MAPKBP1O60336 1514 aa8.34□□□□□ -1.07
PTPN20-212ENST00000502254 ARHGAP5Q13017 1502 aa8.34□□□□□ -1.07
PTPN20-212ENST00000502254 PTPN23Q9H3S7 1636 aa8.34□□□□□ -1.07
PTPN20-212ENST00000502254 GPIHBP1Q8IV16 184 aa8.34□□□□□ -1.07
PTPN20-212ENST00000502254 OXER1Q8TDS5 423 aa8.34□□□□□ -1.07
PTPN20-212ENST00000502254 CHIC2Q9UKJ5 165 aa8.34□□□□□ -1.07
PTPN20-212ENST00000502254 PLCH2O75038 1416 aa8.34□□□□□ -1.07
PTPN20-212ENST00000502254 CD109Q6YHK3 1445 aa8.34□□□□□ -1.07
PTPN20-212ENST00000502254 TCOF1Q13428 1488 aaKnown RBP8.33□□□□□ -1.08
PTPN20-212ENST00000502254 SLC39A7Q92504 469 aa8.33□□□□□ -1.08
PTPN20-212ENST00000502254 DCBLD2Q96PD2 775 aa8.33□□□□□ -1.08
PTPN20-212ENST00000502254 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.33□□□□□ -1.08
PTPN20-212ENST00000502254 CAMSAP2Q08AD1 1489 aa8.32□□□□□ -1.08
PTPN20-212ENST00000502254 C7P10643 843 aa8.32□□□□□ -1.08
PTPN20-212ENST00000502254 PTGER2P43116 358 aa8.32□□□□□ -1.08
PTPN20-212ENST00000502254 ITSN2Q9NZM3 1697 aa8.32□□□□□ -1.08
PTPN20-212ENST00000502254 GPR37O15354 613 aa8.31□□□□□ -1.08
PTPN20-212ENST00000502254 SEC24BO95487 1268 aa8.31□□□□□ -1.08
PTPN20-212ENST00000502254 MAP3K9P80192 1104 aa8.31□□□□□ -1.08
PTPN20-212ENST00000502254 AK7Q96M32 723 aa8.31□□□□□ -1.08
PTPN20-212ENST00000502254 ABCA9Q8IUA7 1624 aa8.31□□□□□ -1.08
PTPN20-212ENST00000502254 CDC42BPAQ5VT25 1732 aa8.31□□□□□ -1.08
PTPN20-212ENST00000502254 PREX2Q70Z35 1606 aa8.3□□□□□ -1.08
PTPN20-212ENST00000502254 TSPY4P0CV99 314 aa8.3□□□□□ -1.08
PTPN20-212ENST00000502254 TSPY10P0CW01 314 aa8.3□□□□□ -1.08
PTPN20-212ENST00000502254 NEUROD2Q15784 382 aa8.3□□□□□ -1.08
PTPN20-212ENST00000502254 RRP7BPQ9NSQ0 103 aa8.3□□□□□ -1.08
PTPN20-212ENST00000502254 FANCAO15360 1455 aa8.3□□□□□ -1.08
PTPN20-212ENST00000502254 ABCC5O15440 1437 aa8.29□□□□□ -1.08
PTPN20-212ENST00000502254 DAPK1P53355 1430 aa8.29□□□□□ -1.08
PTPN20-212ENST00000502254 PTPRKQ15262 1439 aa8.29□□□□□ -1.08
PTPN20-212ENST00000502254 MYT1LQ9UL68 1186 aa8.29□□□□□ -1.08
PTPN20-212ENST00000502254 MYO5CQ9NQX4 1742 aa8.29□□□□□ -1.08
PTPN20-212ENST00000502254 AKNAQ7Z591 1439 aa8.29□□□□□ -1.08
PTPN20-212ENST00000502254 GLI2P10070 1586 aa8.28□□□□□ -1.08
PTPN20-212ENST00000502254 SAMD9LQ8IVG5 1584 aa8.28□□□□□ -1.08
PTPN20-212ENST00000502254 DIP2BQ9P265 1576 aa8.28□□□□□ -1.08
PTPN20-212ENST00000502254 PLEKHH2Q8IVE3 1493 aa8.28□□□□□ -1.08
PTPN20-212ENST00000502254 POTEIP0CG38 1075 aa8.28□□□□□ -1.08
PTPN20-212ENST00000502254 OSBPP22059 807 aa8.28□□□□□ -1.08
PTPN20-212ENST00000502254 CDC42BPBQ9Y5S2 1711 aa8.28□□□□□ -1.08
PTPN20-212ENST00000502254 SCAPERQ9BY12 1400 aa8.28□□□□□ -1.08
PTPN20-212ENST00000502254 RSPH4AQ5TD94 716 aa8.27□□□□□ -1.09
PTPN20-212ENST00000502254 AFAP1Q8N556 730 aa8.27□□□□□ -1.09
PTPN20-212ENST00000502254 ARAP3Q8WWN8 1544 aa8.27□□□□□ -1.09
PTPN20-212ENST00000502254 SYCP2Q9BX26 1530 aa8.27□□□□□ -1.09
PTPN20-212ENST00000502254 KIAA1107Q9UPP5 1409 aa8.27□□□□□ -1.09
PTPN20-212ENST00000502254 ADGRL1O94910 1474 aa8.26□□□□□ -1.09
PTPN20-212ENST00000502254 MBD5Q9P267 1494 aa8.26□□□□□ -1.09
PTPN20-212ENST00000502254 ARHGEF12Q9NZN5 1544 aa8.26□□□□□ -1.09
PTPN20-212ENST00000502254 POTEHQ6S545 545 aa8.26□□□□□ -1.09
PTPN20-212ENST00000502254 PTCD2Q8WV60 388 aaKnown RBP8.26□□□□□ -1.09
PTPN20-212ENST00000502254 UPF1Q92900 1129 aaKnown RBP eCLIP8.26□□□□□ -1.09
PTPN20-212ENST00000502254 METRNQ9UJH8 293 aa8.26□□□□□ -1.09
PTPN20-212ENST00000502254 TIMELESSQ9UNS1 1208 aa8.26□□□□□ -1.09
PTPN20-212ENST00000502254 SETD5Q9C0A6 1442 aa8.26□□□□□ -1.09
PTPN20-212ENST00000502254 TRAPPC8Q9Y2L5 1435 aa8.26□□□□□ -1.09
PTPN20-212ENST00000502254 CCDC141Q6ZP82 1450 aa8.26□□□□□ -1.09
PTPN20-212ENST00000502254 GRXCR2A6NFK2 248 aa8.25□□□□□ -1.09
PTPN20-212ENST00000502254 TBC1D12O60347 775 aa8.25□□□□□ -1.09
PTPN20-212ENST00000502254 SLC34A2O95436 690 aa8.25□□□□□ -1.09
PTPN20-212ENST00000502254 KRI1Q8N9T8 703 aaKnown RBP8.25□□□□□ -1.09
PTPN20-212ENST00000502254 ANO8Q9HCE9 1232 aaPredicted RBP8.25□□□□□ -1.09
PTPN20-212ENST00000502254 C9orf84Q5VXU9 1444 aa8.25□□□□□ -1.09
PTPN20-212ENST00000502254 SPAG9O60271 1321 aaKnown RBP8.25□□□□□ -1.09
PTPN20-212ENST00000502254 DNMT1P26358 1616 aaKnown RBP8.25□□□□□ -1.09
PTPN20-212ENST00000502254 ABCC1P33527 1531 aa8.24□□□□□ -1.09
PTPN20-212ENST00000502254 ANKRD30AQ9BXX3 1397 aa8.24□□□□□ -1.09
PTPN20-212ENST00000502254 TRIM66O15016 1216 aa8.24□□□□□ -1.09
PTPN20-212ENST00000502254 RAPGEF3O95398 923 aa8.24□□□□□ -1.09
PTPN20-212ENST00000502254 ERICH6Q7L0X2 663 aa8.24□□□□□ -1.09
PTPN20-212ENST00000502254 MAP3K4Q9Y6R4 1608 aa8.24□□□□□ -1.09
PTPN20-212ENST00000502254 NEO1Q92859 1461 aa8.24□□□□□ -1.09
PTPN20-212ENST00000502254 RAB3GAP2Q9H2M9 1393 aa8.23□□□□□ -1.09
PTPN20-212ENST00000502254 ARHGEF5Q12774 1597 aa8.23□□□□□ -1.09
PTPN20-212ENST00000502254 EVI5O60447 810 aa8.23□□□□□ -1.09
PTPN20-212ENST00000502254 DENND4BO75064 1496 aaPredicted RBP8.23□□□□□ -1.09
PTPN20-212ENST00000502254 TEX14Q8IWB6 1497 aa8.23□□□□□ -1.09
PTPN20-212ENST00000502254 ROCK1Q13464 1354 aa8.22□□□□□ -1.09
PTPN20-212ENST00000502254 CFAP74Q9C0B2 1584 aa8.22□□□□□ -1.09
PTPN20-212ENST00000502254 NAIPQ13075 1403 aa8.22□□□□□ -1.09
PTPN20-212ENST00000502254 CCER1Q8TC90 406 aaPredicted RBP8.22□□□□□ -1.09
PTPN20-212ENST00000502254 TRIM52Q96A61 297 aa8.22□□□□□ -1.09
PTPN20-212ENST00000502254 MINK1Q8N4C8 1332 aaPredicted RBP8.22□□□□□ -1.09
PTPN20-212ENST00000502254 HFM1A2PYH4 1435 aa8.21□□□□□ -1.09
PTPN20-212ENST00000502254 NCOA1Q15788 1441 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms