RNA–Protein interactions for RNA: ENST00000501038.6

PLXND1-202, Transcript of plexin D1, humanhuman

TSL 1 (best)

Gene PLXND1, Length 1,633 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-202ENST00000501038 PREX1Q8TCU6 1659 aa25.62■■□□□ 1.69
PLXND1-202ENST00000501038 SCAF11Q99590 1463 aaKnown RBP25.61■■□□□ 1.69
PLXND1-202ENST00000501038 TESK2Q96S53 571 aa25.6■■□□□ 1.69
PLXND1-202ENST00000501038 CHGAP10645 457 aaKnown RBP25.59■■□□□ 1.69
PLXND1-202ENST00000501038 GTF3C3Q9Y5Q9 886 aa25.59■■□□□ 1.69
PLXND1-202ENST00000501038 ADGRF5Q8IZF2 1346 aa25.58■■□□□ 1.69
PLXND1-202ENST00000501038 RPGRIP1LQ68CZ1 1315 aa25.56■■□□□ 1.68
PLXND1-202ENST00000501038 PPP6R1Q9UPN7 881 aa25.55■■□□□ 1.68
PLXND1-202ENST00000501038 DISP3Q9P2K9 1392 aa25.54■■□□□ 1.68
PLXND1-202ENST00000501038 CLTCQ00610 1675 aaKnown RBP25.53■■□□□ 1.68
PLXND1-202ENST00000501038 TMF1P82094 1093 aa25.53■■□□□ 1.68
PLXND1-202ENST00000501038 DNAJC5Q9H3Z4 198 aa25.52■■□□□ 1.68
PLXND1-202ENST00000501038 EIF3AQ14152 1382 aaKnown RBP25.52■■□□□ 1.68
PLXND1-202ENST00000501038 SETBP1Q9Y6X0 1596 aa25.52■■□□□ 1.68
PLXND1-202ENST00000501038 CFAP70Q5T0N1 1121 aa25.51■■□□□ 1.67
PLXND1-202ENST00000501038 NEXMIFQ5QGS0 1516 aa25.5■■□□□ 1.67
PLXND1-202ENST00000501038 SLC52A1Q9NWF4 448 aa25.49■■□□□ 1.67
PLXND1-202ENST00000501038 PIK3C2GO75747 1445 aa25.49■■□□□ 1.67
PLXND1-202ENST00000501038 MYO5BQ9ULV0 1848 aa25.49■■□□□ 1.67
PLXND1-202ENST00000501038 ERVK-7P63135 1459 aa25.48■■□□□ 1.67
PLXND1-202ENST00000501038 CCDC184Q52MB2 194 aa25.47■■□□□ 1.67
PLXND1-202ENST00000501038 MYO3AQ8NEV4 1616 aa25.47■■□□□ 1.67
PLXND1-202ENST00000501038 TMEM131LA2VDJ0 1609 aa25.46■■□□□ 1.67
PLXND1-202ENST00000501038 IDI1Q13907 227 aa25.45■■□□□ 1.67
PLXND1-202ENST00000501038 MRS2Q9HD23 443 aa25.44■■□□□ 1.66
PLXND1-202ENST00000501038 KTN1Q86UP2 1357 aaKnown RBP25.43■■□□□ 1.66
PLXND1-202ENST00000501038 C14orf93Q9H972 538 aaKnown RBP25.41■■□□□ 1.66
PLXND1-202ENST00000501038 SPATA31D1Q6ZQQ2 1576 aa25.41■■□□□ 1.66
PLXND1-202ENST00000501038 KDM5AP29375 1690 aaKnown RBP25.4■■□□□ 1.66
PLXND1-202ENST00000501038 ADGRB1O14514 1584 aa25.4■■□□□ 1.66
PLXND1-202ENST00000501038 CDCA8Q53HL2 280 aa25.4■■□□□ 1.66
PLXND1-202ENST00000501038 ZFYVE9O95405 1425 aa25.39■■□□□ 1.66
PLXND1-202ENST00000501038 VGFO15240 615 aaPredicted RBP25.39■■□□□ 1.66
PLXND1-202ENST00000501038 FBXO31Q5XUX0 539 aaPredicted RBP25.38■■□□□ 1.65
PLXND1-202ENST00000501038 SLC24A1O60721 1099 aa25.37■■□□□ 1.65
PLXND1-202ENST00000501038 MYOM1P52179 1685 aa25.36■■□□□ 1.65
PLXND1-202ENST00000501038 MLECQ14165 292 aa25.36■■□□□ 1.65
PLXND1-202ENST00000501038 RALBP1Q15311 655 aa25.36■■□□□ 1.65
PLXND1-202ENST00000501038 PER1O15534 1290 aaPredicted RBP25.35■■□□□ 1.65
PLXND1-202ENST00000501038 CNGB1Q14028 1251 aaPredicted RBP25.35■■□□□ 1.65
PLXND1-202ENST00000501038 PANK3Q9H999 370 aa25.34■■□□□ 1.65
PLXND1-202ENST00000501038 SBNO2Q9Y2G9 1366 aa25.33■■□□□ 1.65
PLXND1-202ENST00000501038 QRICH2Q9H0J4 1663 aa25.33■■□□□ 1.65
PLXND1-202ENST00000501038 HNRNPUQ00839 825 aaKnown RBP eCLIP25.32■■□□□ 1.64
PLXND1-202ENST00000501038 MYBBP1AQ9BQG0 1328 aaKnown RBP25.31■■□□□ 1.64
PLXND1-202ENST00000501038 PARD3Q8TEW0 1356 aa25.3■■□□□ 1.64
PLXND1-202ENST00000501038 FAM9BQ8IZU0 186 aa25.3■■□□□ 1.64
PLXND1-202ENST00000501038 NUTM2DQ5VT03 806 aaPredicted RBP25.3■■□□□ 1.64
PLXND1-202ENST00000501038 CENPJQ9HC77 1338 aaPredicted RBP25.29■■□□□ 1.64
PLXND1-202ENST00000501038 ARHGEF28Q8N1W1 1705 aaKnown RBP25.29■■□□□ 1.64
PLXND1-202ENST00000501038 BRD4O60885 1362 aaPredicted RBP25.28■■□□□ 1.64
PLXND1-202ENST00000501038 ESF1Q9H501 851 aaKnown RBP25.27■■□□□ 1.64
PLXND1-202ENST00000501038 TMEM132EQ6IEE7 984 aa25.26■■□□□ 1.63
PLXND1-202ENST00000501038 TRAK1Q9UPV9 953 aa25.26■■□□□ 1.63
PLXND1-202ENST00000501038 ZMYM3Q14202 1370 aa25.25■■□□□ 1.63
PLXND1-202ENST00000501038 A2ML1A8K2U0 1454 aa25.24■■□□□ 1.63
PLXND1-202ENST00000501038 ASXL1Q8IXJ9 1541 aa25.24■■□□□ 1.63
PLXND1-202ENST00000501038 STAG3Q9UJ98 1225 aa25.23■■□□□ 1.63
PLXND1-202ENST00000501038 TMC1Q8TDI8 760 aa25.23■■□□□ 1.63
PLXND1-202ENST00000501038 PNISRQ8TF01 805 aaKnown RBP25.19■■□□□ 1.62
PLXND1-202ENST00000501038 ALKQ9UM73 1620 aa25.19■■□□□ 1.62
PLXND1-202ENST00000501038 CC2D1BQ5T0F9 858 aaKnown RBP25.18■■□□□ 1.62
PLXND1-202ENST00000501038 NLRP13Q86W25 1043 aa25.18■■□□□ 1.62
PLXND1-202ENST00000501038 KNSTRNQ9Y448 316 aa25.17■■□□□ 1.62
PLXND1-202ENST00000501038 RIMS2Q9UQ26 1411 aa25.17■■□□□ 1.62
PLXND1-202ENST00000501038 ZBED9Q6R2W3 1325 aa25.15■■□□□ 1.62
PLXND1-202ENST00000501038 TRHP20396 242 aaPredicted RBP25.15■■□□□ 1.62
PLXND1-202ENST00000501038 TNRQ92752 1358 aa25.14■■□□□ 1.62
PLXND1-202ENST00000501038 LRPPRCP42704 1394 aaKnown RBP25.14■■□□□ 1.61
PLXND1-202ENST00000501038 NPC1L1Q9UHC9 1359 aa25.14■■□□□ 1.61
PLXND1-202ENST00000501038 SETD1AO15047 1707 aaKnown RBP25.12■■□□□ 1.61
PLXND1-202ENST00000501038 AMER1Q5JTC6 1135 aaPredicted RBP25.12■■□□□ 1.61
PLXND1-202ENST00000501038 TULP4Q9NRJ4 1543 aa25.1■■□□□ 1.61
PLXND1-202ENST00000501038 YTHDC2Q9H6S0 1430 aaKnown RBP25.1■■□□□ 1.61
PLXND1-202ENST00000501038 PTPRMP28827 1452 aa25.09■■□□□ 1.61
PLXND1-202ENST00000501038 UBR1Q8IWV7 1749 aa25.09■■□□□ 1.61
PLXND1-202ENST00000501038 PUS7Q96PZ0 661 aaKnown RBP25.09■■□□□ 1.61
PLXND1-202ENST00000501038 FER1L4A9Z1Z3 1794 aa25.08■■□□□ 1.61
PLXND1-202ENST00000501038 EVC2Q86UK5 1308 aa25.07■■□□□ 1.6
PLXND1-202ENST00000501038 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.07■■□□□ 1.6
PLXND1-202ENST00000501038 SENP3Q9H4L4 574 aaPredicted RBP25.06■■□□□ 1.6
PLXND1-202ENST00000501038 STK26Q9P289 416 aa25.06■■□□□ 1.6
PLXND1-202ENST00000501038 C3P01024 1663 aa25.06■■□□□ 1.6
PLXND1-202ENST00000501038 NRXN3Q9Y4C0 1643 aa25.06■■□□□ 1.6
PLXND1-202ENST00000501038 SUPT16HQ9Y5B9 1047 aaKnown RBP25.04■■□□□ 1.6
PLXND1-202ENST00000501038 DLC1Q96QB1 1528 aa25.04■■□□□ 1.6
PLXND1-202ENST00000501038 CARD14Q9BXL6 1004 aa25.02■■□□□ 1.6
PLXND1-202ENST00000501038 NLRP1Q9C000 1473 aa25.01■■□□□ 1.59
PLXND1-202ENST00000501038 USP32Q8NFA0 1604 aa25.01■■□□□ 1.59
PLXND1-202ENST00000501038 PPP2R1AP30153 589 aa25.01■■□□□ 1.59
PLXND1-202ENST00000501038 INSRP06213 1382 aa25■■□□□ 1.59
PLXND1-202ENST00000501038 HDGFP51858 240 aaKnown RBP25■■□□□ 1.59
PLXND1-202ENST00000501038 PRAM1Q96QH2 718 aa24.97■■□□□ 1.59
PLXND1-202ENST00000501038 POGKQ9P215 609 aa24.97■■□□□ 1.59
PLXND1-202ENST00000501038 TMEM2Q9UHN6 1383 aa24.97■■□□□ 1.59
PLXND1-202ENST00000501038 NEFLP07196 543 aa24.97■■□□□ 1.59
PLXND1-202ENST00000501038 SAFB2Q14151 953 aaKnown RBP eCLIP24.97■■□□□ 1.59
PLXND1-202ENST00000501038 SLC12A5Q9H2X9 1139 aa24.97■■□□□ 1.59
PLXND1-202ENST00000501038 NSD3Q9BZ95 1437 aa24.96■■□□□ 1.59
PLXND1-202ENST00000501038 KNDC1Q76NI1 1749 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms