RNA–Protein interactions for RNA: ENST00000500215.3

LINC02288-201, Transcript of long intergenic non-protein coding RNA 2288, humanhuman

TSL 2 BASIC

Gene LINC02288, Length 2,924 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02288-201ENST00000500215 PPP6R1Q9UPN7 881 aa16.44■□□□□ 0.22
LINC02288-201ENST00000500215 TRPM1Q7Z4N2 1603 aa16.43■□□□□ 0.22
LINC02288-201ENST00000500215 MADDQ8WXG6 1647 aa16.42■□□□□ 0.22
LINC02288-201ENST00000500215 PIK3C2BO00750 1634 aa16.41■□□□□ 0.22
LINC02288-201ENST00000500215 FER1L4A9Z1Z3 1794 aa16.4■□□□□ 0.22
LINC02288-201ENST00000500215 TNRQ92752 1358 aa16.4■□□□□ 0.22
LINC02288-201ENST00000500215 SPATA31D1Q6ZQQ2 1576 aa16.38■□□□□ 0.21
LINC02288-201ENST00000500215 STK26Q9P289 416 aa16.38■□□□□ 0.21
LINC02288-201ENST00000500215 TRAK1Q9UPV9 953 aa16.38■□□□□ 0.21
LINC02288-201ENST00000500215 KIF7Q2M1P5 1343 aa16.37■□□□□ 0.21
LINC02288-201ENST00000500215 TMEM131LA2VDJ0 1609 aa16.37■□□□□ 0.21
LINC02288-201ENST00000500215 SAFB2Q14151 953 aaKnown RBP eCLIP16.37■□□□□ 0.21
LINC02288-201ENST00000500215 BCANQ96GW7 911 aa16.36■□□□□ 0.21
LINC02288-201ENST00000500215 PPLO60437 1756 aa16.36■□□□□ 0.21
LINC02288-201ENST00000500215 C3P01024 1663 aa16.36■□□□□ 0.21
LINC02288-201ENST00000500215 RIMS1Q86UR5 1692 aaKnown RBP16.36■□□□□ 0.21
LINC02288-201ENST00000500215 NEXMIFQ5QGS0 1516 aa16.36■□□□□ 0.21
LINC02288-201ENST00000500215 IFT172Q9UG01 1749 aa16.35■□□□□ 0.21
LINC02288-201ENST00000500215 VGFO15240 615 aaPredicted RBP16.34■□□□□ 0.21
LINC02288-201ENST00000500215 A2ML1A8K2U0 1454 aa16.34■□□□□ 0.21
LINC02288-201ENST00000500215 CCDC7Q96M83 1385 aa16.33■□□□□ 0.21
LINC02288-201ENST00000500215 MYOM2P54296 1465 aa16.32■□□□□ 0.2
LINC02288-201ENST00000500215 GPRASP1Q5JY77 1395 aa16.32■□□□□ 0.2
LINC02288-201ENST00000500215 PIK3C2GO75747 1445 aa16.31■□□□□ 0.2
LINC02288-201ENST00000500215 RIMS2Q9UQ26 1411 aa16.31■□□□□ 0.2
LINC02288-201ENST00000500215 RPGRIP1LQ68CZ1 1315 aa16.3■□□□□ 0.2
LINC02288-201ENST00000500215 C14orf93Q9H972 538 aaKnown RBP16.3■□□□□ 0.2
LINC02288-201ENST00000500215 YTHDC1Q96MU7 727 aaKnown RBP16.3■□□□□ 0.2
LINC02288-201ENST00000500215 DISP3Q9P2K9 1392 aa16.3■□□□□ 0.2
LINC02288-201ENST00000500215 LTKP29376 864 aa16.29■□□□□ 0.2
LINC02288-201ENST00000500215 TESK2Q96S53 571 aa16.29■□□□□ 0.2
LINC02288-201ENST00000500215 NRXN1Q9ULB1 1477 aa16.27■□□□□ 0.2
LINC02288-201ENST00000500215 NEURL4Q96JN8 1562 aa16.27■□□□□ 0.2
LINC02288-201ENST00000500215 SLC26A8Q96RN1 970 aa16.27■□□□□ 0.19
LINC02288-201ENST00000500215 TXNDC2Q86VQ3 553 aa16.26■□□□□ 0.19
LINC02288-201ENST00000500215 SCAF11Q99590 1463 aaKnown RBP16.25■□□□□ 0.19
LINC02288-201ENST00000500215 STAC3Q96MF2 364 aa16.25■□□□□ 0.19
LINC02288-201ENST00000500215 ADAMTSL3P82987 1691 aa16.24■□□□□ 0.19
LINC02288-201ENST00000500215 UBR1Q8IWV7 1749 aa16.23■□□□□ 0.19
LINC02288-201ENST00000500215 TMEM2Q9UHN6 1383 aa16.23■□□□□ 0.19
LINC02288-201ENST00000500215 IQGAP1P46940 1657 aa16.23■□□□□ 0.19
LINC02288-201ENST00000500215 ZFYVE9O95405 1425 aa16.22■□□□□ 0.19
LINC02288-201ENST00000500215 ADGRB1O14514 1584 aa16.22■□□□□ 0.19
LINC02288-201ENST00000500215 ASXL1Q8IXJ9 1541 aa16.22■□□□□ 0.19
LINC02288-201ENST00000500215 WAPLQ7Z5K2 1190 aa16.21■□□□□ 0.19
LINC02288-201ENST00000500215 TMF1P82094 1093 aa16.21■□□□□ 0.18
LINC02288-201ENST00000500215 MINK1Q8N4C8 1332 aaPredicted RBP16.2■□□□□ 0.18
LINC02288-201ENST00000500215 CENPJQ9HC77 1338 aaPredicted RBP16.2■□□□□ 0.18
LINC02288-201ENST00000500215 PTPRMP28827 1452 aa16.2■□□□□ 0.18
LINC02288-201ENST00000500215 METP08581 1390 aa16.2■□□□□ 0.18
LINC02288-201ENST00000500215 PRAM1Q96QH2 718 aa16.19■□□□□ 0.18
LINC02288-201ENST00000500215 ALKQ9UM73 1620 aa16.19■□□□□ 0.18
LINC02288-201ENST00000500215 ANP32CO43423 234 aa16.19■□□□□ 0.18
LINC02288-201ENST00000500215 MYO3AQ8NEV4 1616 aa16.19■□□□□ 0.18
LINC02288-201ENST00000500215 NLRP1Q9C000 1473 aa16.19■□□□□ 0.18
LINC02288-201ENST00000500215 LAMC1P11047 1609 aa16.18■□□□□ 0.18
LINC02288-201ENST00000500215 KIAA1210Q9ULL0 1709 aa16.18■□□□□ 0.18
LINC02288-201ENST00000500215 THEMISQ8N1K5 641 aaPredicted RBP16.18■□□□□ 0.18
LINC02288-201ENST00000500215 EIF3AQ14152 1382 aaKnown RBP16.17■□□□□ 0.18
LINC02288-201ENST00000500215 POGKQ9P215 609 aa16.17■□□□□ 0.18
LINC02288-201ENST00000500215 EID1Q9Y6B2 187 aa16.17■□□□□ 0.18
LINC02288-201ENST00000500215 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.17■□□□□ 0.18
LINC02288-201ENST00000500215 KDM4FA0A1W2PPD8 638 aa16.16■□□□□ 0.18
LINC02288-201ENST00000500215 PLEKHH1Q9ULM0 1364 aa16.16■□□□□ 0.18
LINC02288-201ENST00000500215 HSPA2P54652 639 aa16.15■□□□□ 0.18
LINC02288-201ENST00000500215 YTHDC2Q9H6S0 1430 aaKnown RBP16.15■□□□□ 0.18
LINC02288-201ENST00000500215 RBM33Q96EV2 1170 aaKnown RBP16.15■□□□□ 0.18
LINC02288-201ENST00000500215 CABP2Q9NPB3 220 aa16.15■□□□□ 0.18
LINC02288-201ENST00000500215 POLR1AO95602 1720 aaPredicted RBP16.14■□□□□ 0.18
LINC02288-201ENST00000500215 CEP170BQ9Y4F5 1589 aaPredicted RBP16.14■□□□□ 0.17
LINC02288-201ENST00000500215 NRXN3Q9Y4C0 1643 aa16.14■□□□□ 0.17
LINC02288-201ENST00000500215 TMC1Q8TDI8 760 aa16.14■□□□□ 0.17
LINC02288-201ENST00000500215 PANK3Q9H999 370 aa16.14■□□□□ 0.17
LINC02288-201ENST00000500215 CCDC184Q52MB2 194 aa16.14■□□□□ 0.17
LINC02288-201ENST00000500215 SETBP1Q9Y6X0 1596 aa16.13■□□□□ 0.17
LINC02288-201ENST00000500215 HDGFP51858 240 aaKnown RBP16.13■□□□□ 0.17
LINC02288-201ENST00000500215 NUTM2FA1L443 756 aa16.12■□□□□ 0.17
LINC02288-201ENST00000500215 ARHGEF28Q8N1W1 1705 aaKnown RBP16.11■□□□□ 0.17
LINC02288-201ENST00000500215 ADAMTS13Q76LX8 1427 aa16.11■□□□□ 0.17
LINC02288-201ENST00000500215 CC2D1BQ5T0F9 858 aaKnown RBP16.11■□□□□ 0.17
LINC02288-201ENST00000500215 QRICH2Q9H0J4 1663 aa16.11■□□□□ 0.17
LINC02288-201ENST00000500215 SETD1BQ9UPS6 1966 aaKnown RBP16.11■□□□□ 0.17
LINC02288-201ENST00000500215 NCKAP5LQ9HCH0 1330 aa16.11■□□□□ 0.17
LINC02288-201ENST00000500215 SRPK2P78362 688 aaKnown RBP16.1■□□□□ 0.17
LINC02288-201ENST00000500215 SLC12A5Q9H2X9 1139 aa16.1■□□□□ 0.17
LINC02288-201ENST00000500215 SENP3-EIF4A1A0A087X0R7 540 aa16.08■□□□□ 0.17
LINC02288-201ENST00000500215 PRKRIP1Q9H875 184 aaPredicted RBP16.08■□□□□ 0.17
LINC02288-201ENST00000500215 SETD1AO15047 1707 aaKnown RBP16.08■□□□□ 0.17
LINC02288-201ENST00000500215 PLEKHG1Q9ULL1 1385 aa16.07■□□□□ 0.16
LINC02288-201ENST00000500215 ANKLE2Q86XL3 938 aa16.07■□□□□ 0.16
LINC02288-201ENST00000500215 ARHGAP23Q9P227 1491 aa16.07■□□□□ 0.16
LINC02288-201ENST00000500215 AMOTL2Q9Y2J4 779 aa16.06■□□□□ 0.16
LINC02288-201ENST00000500215 SLIT1O75093 1534 aa16.06■□□□□ 0.16
LINC02288-201ENST00000500215 PTPRUQ92729 1446 aa16.06■□□□□ 0.16
LINC02288-201ENST00000500215 ROBO2Q9HCK4 1378 aa16.06■□□□□ 0.16
LINC02288-201ENST00000500215 LRPPRCP42704 1394 aaKnown RBP16.05■□□□□ 0.16
LINC02288-201ENST00000500215 TULP4Q9NRJ4 1543 aa16.05■□□□□ 0.16
LINC02288-201ENST00000500215 KDM5AP29375 1690 aaKnown RBP16.04■□□□□ 0.16
LINC02288-201ENST00000500215 CDK19Q9BWU1 502 aa16.04■□□□□ 0.16
LINC02288-201ENST00000500215 EVC2Q86UK5 1308 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms