RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 KIAA1107Q9UPP5 1409 aa12.05□□□□□ -0.48
FN1-227ENST00000498719 ARID4BQ4LE39 1312 aaPredicted RBP12.05□□□□□ -0.48
FN1-227ENST00000498719 TICAM2Q86XR7 235 aa12.05□□□□□ -0.48
FN1-227ENST00000498719 ADGRL2O95490 1459 aa12.05□□□□□ -0.48
FN1-227ENST00000498719 PLEKHD1A6NEE1 506 aa12.05□□□□□ -0.48
FN1-227ENST00000498719 ANKRD50Q9ULJ7 1429 aa12.04□□□□□ -0.48
FN1-227ENST00000498719 ANKRD30AQ9BXX3 1397 aa12.04□□□□□ -0.48
FN1-227ENST00000498719 BCORL1Q5H9F3 1711 aa12.04□□□□□ -0.48
FN1-227ENST00000498719 AK7Q96M32 723 aa12.03□□□□□ -0.48
FN1-227ENST00000498719 ATP10BO94823 1461 aa12.03□□□□□ -0.48
FN1-227ENST00000498719 MBD5Q9P267 1494 aa12.03□□□□□ -0.48
FN1-227ENST00000498719 UNCXA6NJT0 531 aa12.03□□□□□ -0.48
FN1-227ENST00000498719 RBM19Q9Y4C8 960 aaKnown RBP12.03□□□□□ -0.48
FN1-227ENST00000498719 PLCD3Q8N3E9 789 aa12.02□□□□□ -0.48
FN1-227ENST00000498719 ABCA8O94911 1581 aa12.02□□□□□ -0.49
FN1-227ENST00000498719 PSMD1Q99460 953 aa12.02□□□□□ -0.49
FN1-227ENST00000498719 NUP155O75694 1391 aa12.02□□□□□ -0.49
FN1-227ENST00000498719 USP47Q96K76 1375 aa12.02□□□□□ -0.49
FN1-227ENST00000498719 HNRNPMP52272 730 aaKnown RBP eCLIP12.01□□□□□ -0.49
FN1-227ENST00000498719 ABCC10Q5T3U5 1492 aa12.01□□□□□ -0.49
FN1-227ENST00000498719 C9orf84Q5VXU9 1444 aa12.01□□□□□ -0.49
FN1-227ENST00000498719 KDM4AO75164 1064 aa12.01□□□□□ -0.49
FN1-227ENST00000498719 SENP3-EIF4A1A0A087X0R7 540 aa12□□□□□ -0.49
FN1-227ENST00000498719 PLEKHG3A1L390 1219 aa11.99□□□□□ -0.49
FN1-227ENST00000498719 STK25O00506 426 aa11.99□□□□□ -0.49
FN1-227ENST00000498719 DHX29Q7Z478 1369 aaKnown RBP11.98□□□□□ -0.49
FN1-227ENST00000498719 KDM5CP41229 1560 aa11.98□□□□□ -0.49
FN1-227ENST00000498719 TSPY4P0CV99 314 aa11.98□□□□□ -0.49
FN1-227ENST00000498719 TSPY10P0CW01 314 aa11.98□□□□□ -0.49
FN1-227ENST00000498719 PDE4DQ08499 809 aa11.97□□□□□ -0.49
FN1-227ENST00000498719 ZBED9Q6R2W3 1325 aa11.97□□□□□ -0.49
FN1-227ENST00000498719 IGSF5Q9NSI5 407 aa11.97□□□□□ -0.49
FN1-227ENST00000498719 KIF15Q9NS87 1388 aa11.96□□□□□ -0.49
FN1-227ENST00000498719 ZNF526Q8TF50 670 aaPredicted RBP11.96□□□□□ -0.49
FN1-227ENST00000498719 CC2D2BQ6DHV5 1058 aa11.96□□□□□ -0.5
FN1-227ENST00000498719 CCDC136Q96JN2 1154 aa11.96□□□□□ -0.5
FN1-227ENST00000498719 PRDM16Q9HAZ2 1276 aa11.96□□□□□ -0.5
FN1-227ENST00000498719 SHANK2Q9UPX8 1470 aa11.95□□□□□ -0.5
FN1-227ENST00000498719 SMARCA5O60264 1052 aaPredicted RBP11.95□□□□□ -0.5
FN1-227ENST00000498719 CARD11Q9BXL7 1154 aa11.95□□□□□ -0.5
FN1-227ENST00000498719 CCDC27Q2M243 656 aa11.95□□□□□ -0.5
FN1-227ENST00000498719 DCAF11Q8TEB1 546 aa11.95□□□□□ -0.5
FN1-227ENST00000498719 ANP32EQ9BTT0 268 aa11.95□□□□□ -0.5
FN1-227ENST00000498719 CDC42BPBQ9Y5S2 1711 aa11.94□□□□□ -0.5
FN1-227ENST00000498719 CCDC97Q96F63 343 aaPredicted RBP11.94□□□□□ -0.5
FN1-227ENST00000498719 PTPRGP23470 1445 aa11.94□□□□□ -0.5
FN1-227ENST00000498719 TRIM66O15016 1216 aa11.94□□□□□ -0.5
FN1-227ENST00000498719 SAMD9LQ8IVG5 1584 aa11.93□□□□□ -0.5
FN1-227ENST00000498719 ST20-MTHFSA0A0A6YYL1 179 aa11.93□□□□□ -0.5
FN1-227ENST00000498719 CLSTN1O94985 981 aa11.93□□□□□ -0.5
FN1-227ENST00000498719 ARHGEF1Q92888 912 aaKnown RBP11.93□□□□□ -0.5
FN1-227ENST00000498719 SERPINA10Q9UK55 444 aa11.93□□□□□ -0.5
FN1-227ENST00000498719 AMOTL2Q9Y2J4 779 aa11.93□□□□□ -0.5
FN1-227ENST00000498719 RALGAPBQ86X10 1494 aa11.93□□□□□ -0.5
FN1-227ENST00000498719 UHRF1BP1Q6BDS2 1440 aa11.93□□□□□ -0.5
FN1-227ENST00000498719 ARIH1Q9Y4X5 557 aaPredicted RBP11.92□□□□□ -0.5
FN1-227ENST00000498719 B4GALNT3Q6L9W6 998 aa11.91□□□□□ -0.5
FN1-227ENST00000498719 A0A0U1RQG5 324 aaPredicted RBP11.91□□□□□ -0.5
FN1-227ENST00000498719 KDM5DQ9BY66 1539 aa11.91□□□□□ -0.5
FN1-227ENST00000498719 PPP4R2Q9NY27 417 aa11.9□□□□□ -0.5
FN1-227ENST00000498719 ARHGEF5Q12774 1597 aa11.9□□□□□ -0.5
FN1-227ENST00000498719 FGD1P98174 961 aa11.9□□□□□ -0.5
FN1-227ENST00000498719 POM121Q96HA1 1249 aa11.9□□□□□ -0.5
FN1-227ENST00000498719 PREX2Q70Z35 1606 aa11.89□□□□□ -0.51
FN1-227ENST00000498719 ARHGEF12Q9NZN5 1544 aa11.89□□□□□ -0.51
FN1-227ENST00000498719 FAM135AQ9P2D6 1515 aa11.89□□□□□ -0.51
FN1-227ENST00000498719 CCDC141Q6ZP82 1450 aa11.89□□□□□ -0.51
FN1-227ENST00000498719 CHD1O14646 1710 aa11.89□□□□□ -0.51
FN1-227ENST00000498719 RGL3Q3MIN7 710 aa11.89□□□□□ -0.51
FN1-227ENST00000498719 FNBP4Q8N3X1 1017 aaPredicted RBP11.89□□□□□ -0.51
FN1-227ENST00000498719 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.89□□□□□ -0.51
FN1-227ENST00000498719 SYCP2Q9BX26 1530 aa11.88□□□□□ -0.51
FN1-227ENST00000498719 TTC37Q6PGP7 1564 aa11.88□□□□□ -0.51
FN1-227ENST00000498719 MSH5O43196 834 aa11.88□□□□□ -0.51
FN1-227ENST00000498719 PKNOX2Q96KN3 472 aa11.88□□□□□ -0.51
FN1-227ENST00000498719 ROCK2O75116 1388 aaKnown RBP11.87□□□□□ -0.51
FN1-227ENST00000498719 ERICH6BQ5W0A0 696 aa11.87□□□□□ -0.51
FN1-227ENST00000498719 PROSER2Q86WR7 435 aaPredicted RBP11.87□□□□□ -0.51
FN1-227ENST00000498719 KRI1Q8N9T8 703 aaKnown RBP11.87□□□□□ -0.51
FN1-227ENST00000498719 TMC1Q8TDI8 760 aa11.87□□□□□ -0.51
FN1-227ENST00000498719 PNISRQ8TF01 805 aaKnown RBP11.87□□□□□ -0.51
FN1-227ENST00000498719 ERCC6L2Q5T890 1561 aa11.86□□□□□ -0.51
FN1-227ENST00000498719 RIOK3O14730 519 aaKnown RBP11.86□□□□□ -0.51
FN1-227ENST00000498719 NBPF1Q3BBV0 1214 aa11.86□□□□□ -0.51
FN1-227ENST00000498719 ARHGAP5Q13017 1502 aa11.86□□□□□ -0.51
FN1-227ENST00000498719 MCM6Q14566 821 aa11.85□□□□□ -0.51
FN1-227ENST00000498719 SMG6Q86US8 1419 aaKnown RBP11.85□□□□□ -0.51
FN1-227ENST00000498719 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.84□□□□□ -0.51
FN1-227ENST00000498719 CCDC144AA2RUR9 1427 aa11.84□□□□□ -0.51
FN1-227ENST00000498719 NUDCQ9Y266 331 aa11.84□□□□□ -0.51
FN1-227ENST00000498719 PLA2R1Q13018 1463 aa11.83□□□□□ -0.51
FN1-227ENST00000498719 TRPM1Q7Z4N2 1603 aa11.83□□□□□ -0.52
FN1-227ENST00000498719 PRAG1Q86YV5 1406 aa11.83□□□□□ -0.52
FN1-227ENST00000498719 MYT1LQ9UL68 1186 aa11.82□□□□□ -0.52
FN1-227ENST00000498719 E9PCH4 1651 aa11.82□□□□□ -0.52
FN1-227ENST00000498719 PLEKHH2Q8IVE3 1493 aa11.82□□□□□ -0.52
FN1-227ENST00000498719 SALL2Q9Y467 1007 aaPredicted RBP11.8□□□□□ -0.52
FN1-227ENST00000498719 A2MP01023 1474 aa11.8□□□□□ -0.52
FN1-227ENST00000498719 MYO5CQ9NQX4 1742 aa11.8□□□□□ -0.52
FN1-227ENST00000498719 UNC13BO14795 1591 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms