RNA–Protein interactions for RNA: ENST00000498694.1

CTPS1-212, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 599 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-212ENST00000498694 OXER1Q8TDS5 423 aa6.46□□□□□ -1.38
CTPS1-212ENST00000498694 PCDHGA4Q9Y5G9 962 aa6.46□□□□□ -1.38
CTPS1-212ENST00000498694 PREX2Q70Z35 1606 aa6.46□□□□□ -1.38
CTPS1-212ENST00000498694 PPRC1Q5VV67 1664 aaKnown RBP6.45□□□□□ -1.38
CTPS1-212ENST00000498694 TROQ12816 1431 aaPredicted RBP6.45□□□□□ -1.38
CTPS1-212ENST00000498694 RANGAP1P46060 587 aaPredicted RBP6.45□□□□□ -1.38
CTPS1-212ENST00000498694 FAM69CQ0P6D2 419 aa6.45□□□□□ -1.38
CTPS1-212ENST00000498694 PTCD2Q8WV60 388 aaKnown RBP6.45□□□□□ -1.38
CTPS1-212ENST00000498694 ABCC10Q5T3U5 1492 aa6.45□□□□□ -1.38
CTPS1-212ENST00000498694 SUPT6HQ7KZ85 1726 aaKnown RBP6.45□□□□□ -1.38
CTPS1-212ENST00000498694 ZNF316A6NFI3 1004 aaPredicted RBP6.44□□□□□ -1.38
CTPS1-212ENST00000498694 ARSIQ5FYB1 569 aa6.44□□□□□ -1.38
CTPS1-212ENST00000498694 KHSRPQ92945 711 aaKnown RBP eCLIP6.44□□□□□ -1.38
CTPS1-212ENST00000498694 LRRC9Q6ZRR7 1453 aa6.44□□□□□ -1.38
CTPS1-212ENST00000498694 ITSN2Q9NZM3 1697 aa6.44□□□□□ -1.38
CTPS1-212ENST00000498694 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.44□□□□□ -1.38
CTPS1-212ENST00000498694 ARAP3Q8WWN8 1544 aa6.44□□□□□ -1.38
CTPS1-212ENST00000498694 CDC42BPAQ5VT25 1732 aa6.43□□□□□ -1.38
CTPS1-212ENST00000498694 MYO5CQ9NQX4 1742 aa6.43□□□□□ -1.38
CTPS1-212ENST00000498694 ARIH1Q9Y4X5 557 aaPredicted RBP6.43□□□□□ -1.38
CTPS1-212ENST00000498694 KDM4FA0A1W2PPD8 638 aa6.42□□□□□ -1.38
CTPS1-212ENST00000498694 EVI5O60447 810 aa6.42□□□□□ -1.38
CTPS1-212ENST00000498694 NUDT7P0C024 238 aa6.42□□□□□ -1.38
CTPS1-212ENST00000498694 TPRNQ4KMQ1 711 aa6.42□□□□□ -1.38
CTPS1-212ENST00000498694 ZSWIM6Q9HCJ5 1215 aa6.42□□□□□ -1.38
CTPS1-212ENST00000498694 CFAP74Q9C0B2 1584 aa6.42□□□□□ -1.38
CTPS1-212ENST00000498694 SPDYE16A6NNV3 312 aaPredicted RBP6.41□□□□□ -1.38
CTPS1-212ENST00000498694 SEMA3EO15041 775 aa6.41□□□□□ -1.38
CTPS1-212ENST00000498694 PDIA6Q15084 440 aa6.41□□□□□ -1.38
CTPS1-212ENST00000498694 GPR153Q6NV75 609 aa6.41□□□□□ -1.38
CTPS1-212ENST00000498694 NCOA2Q15596 1464 aa6.41□□□□□ -1.38
CTPS1-212ENST00000498694 ABCC1P33527 1531 aa6.4□□□□□ -1.38
CTPS1-212ENST00000498694 CDC42BPBQ9Y5S2 1711 aa6.4□□□□□ -1.38
CTPS1-212ENST00000498694 ST18O60284 1047 aa6.39□□□□□ -1.39
CTPS1-212ENST00000498694 TTBK1Q5TCY1 1321 aaPredicted RBP6.39□□□□□ -1.39
CTPS1-212ENST00000498694 MTUS2Q5JR59 1369 aa6.39□□□□□ -1.39
CTPS1-212ENST00000498694 FRMPD1Q5SYB0 1578 aa6.39□□□□□ -1.39
CTPS1-212ENST00000498694 SAMD9LQ8IVG5 1584 aa6.39□□□□□ -1.39
CTPS1-212ENST00000498694 CROCC2H7BZ55 1655 aa6.39□□□□□ -1.39
CTPS1-212ENST00000498694 GRXCR2A6NFK2 248 aa6.38□□□□□ -1.39
CTPS1-212ENST00000498694 HOXB1P14653 301 aaPredicted RBP6.38□□□□□ -1.39
CTPS1-212ENST00000498694 DDX12PQ92771 950 aa6.38□□□□□ -1.39
CTPS1-212ENST00000498694 MLLT3P42568 568 aaPredicted RBP6.37□□□□□ -1.39
CTPS1-212ENST00000498694 MARVELD3Q96A59 401 aa6.37□□□□□ -1.39
CTPS1-212ENST00000498694 GPATCH8Q9UKJ3 1502 aaKnown RBP6.36□□□□□ -1.39
CTPS1-212ENST00000498694 TCOF1Q13428 1488 aaKnown RBP6.36□□□□□ -1.39
CTPS1-212ENST00000498694 MYOM3Q5VTT5 1437 aa6.36□□□□□ -1.39
CTPS1-212ENST00000498694 PHLDB1Q86UU1 1377 aa6.36□□□□□ -1.39
CTPS1-212ENST00000498694 TULP1O00294 542 aaPredicted RBP6.36□□□□□ -1.39
CTPS1-212ENST00000498694 EMP3P54852 163 aa6.36□□□□□ -1.39
CTPS1-212ENST00000498694 LHX6Q9UPM6 363 aa6.36□□□□□ -1.39
CTPS1-212ENST00000498694 RICTORQ6R327 1708 aa6.36□□□□□ -1.39
CTPS1-212ENST00000498694 PTPN23Q9H3S7 1636 aa6.36□□□□□ -1.39
CTPS1-212ENST00000498694 KDM5CP41229 1560 aa6.35□□□□□ -1.39
CTPS1-212ENST00000498694 ZMYM4Q5VZL5 1548 aa6.35□□□□□ -1.39
CTPS1-212ENST00000498694 SYCP2Q9BX26 1530 aa6.35□□□□□ -1.39
CTPS1-212ENST00000498694 CAMSAP2Q08AD1 1489 aa6.35□□□□□ -1.39
CTPS1-212ENST00000498694 TEX14Q8IWB6 1497 aa6.35□□□□□ -1.39
CTPS1-212ENST00000498694 NEO1Q92859 1461 aa6.35□□□□□ -1.39
CTPS1-212ENST00000498694 TESPA1A2RU30 521 aaPredicted RBP6.35□□□□□ -1.39
CTPS1-212ENST00000498694 ARID3CA6NKF2 412 aa6.35□□□□□ -1.39
CTPS1-212ENST00000498694 ZNF454Q8N9F8 522 aa6.35□□□□□ -1.39
CTPS1-212ENST00000498694 ANO8Q9HCE9 1232 aaPredicted RBP6.35□□□□□ -1.39
CTPS1-212ENST00000498694 DNMT1P26358 1616 aaKnown RBP6.35□□□□□ -1.39
CTPS1-212ENST00000498694 ARHGEF5Q12774 1597 aa6.35□□□□□ -1.39
CTPS1-212ENST00000498694 INO80Q9ULG1 1556 aaPredicted RBP6.35□□□□□ -1.39
CTPS1-212ENST00000498694 ARHGAP5Q13017 1502 aa6.35□□□□□ -1.39
CTPS1-212ENST00000498694 PLCH2O75038 1416 aa6.34□□□□□ -1.39
CTPS1-212ENST00000498694 FGD6Q6ZV73 1430 aa6.34□□□□□ -1.39
CTPS1-212ENST00000498694 MIA2Q96PC5 1412 aa6.34□□□□□ -1.39
CTPS1-212ENST00000498694 ERBB3P21860 1342 aa6.34□□□□□ -1.39
CTPS1-212ENST00000498694 SMYD5Q6GMV2 418 aa6.34□□□□□ -1.39
CTPS1-212ENST00000498694 TSPOAP1O95153 1857 aa6.34□□□□□ -1.39
CTPS1-212ENST00000498694 ZFYVE16Q7Z3T8 1539 aa6.34□□□□□ -1.39
CTPS1-212ENST00000498694 ARHGEF40Q8TER5 1519 aa6.34□□□□□ -1.39
CTPS1-212ENST00000498694 FANCAO15360 1455 aa6.34□□□□□ -1.4
CTPS1-212ENST00000498694 COL17A1Q9UMD9 1497 aaPredicted RBP6.34□□□□□ -1.4
CTPS1-212ENST00000498694 CD109Q6YHK3 1445 aa6.33□□□□□ -1.4
CTPS1-212ENST00000498694 RRBP1Q9P2E9 1410 aaKnown RBP6.33□□□□□ -1.4
CTPS1-212ENST00000498694 MAST1Q9Y2H9 1570 aa6.33□□□□□ -1.4
CTPS1-212ENST00000498694 PTGER2P43116 358 aa6.33□□□□□ -1.4
CTPS1-212ENST00000498694 KANK4Q5T7N3 995 aaPredicted RBP6.33□□□□□ -1.4
CTPS1-212ENST00000498694 CDAN1Q8IWY9 1227 aa6.33□□□□□ -1.4
CTPS1-212ENST00000498694 CDK11AQ9UQ88 783 aaPredicted RBP6.33□□□□□ -1.4
CTPS1-212ENST00000498694 SHANK2Q9UPX8 1470 aa6.33□□□□□ -1.4
CTPS1-212ENST00000498694 POGZQ7Z3K3 1410 aa6.33□□□□□ -1.4
CTPS1-212ENST00000498694 PLXNC1O60486 1568 aa6.32□□□□□ -1.4
CTPS1-212ENST00000498694 HECW2Q9P2P5 1572 aa6.32□□□□□ -1.4
CTPS1-212ENST00000498694 FAM205CA6NFA0 338 aa6.32□□□□□ -1.4
CTPS1-212ENST00000498694 PHF14O94880 888 aa6.32□□□□□ -1.4
CTPS1-212ENST00000498694 RBM33Q96EV2 1170 aaKnown RBP6.32□□□□□ -1.4
CTPS1-212ENST00000498694 ADGRL1O94910 1474 aa6.32□□□□□ -1.4
CTPS1-212ENST00000498694 PLEKHH2Q8IVE3 1493 aa6.32□□□□□ -1.4
CTPS1-212ENST00000498694 ADGBQ8N7X0 1667 aa6.32□□□□□ -1.4
CTPS1-212ENST00000498694 KDM6BO15054 1643 aa6.32□□□□□ -1.4
CTPS1-212ENST00000498694 CCNB3Q8WWL7 1395 aa6.31□□□□□ -1.4
CTPS1-212ENST00000498694 ARHGEF12Q9NZN5 1544 aa6.31□□□□□ -1.4
CTPS1-212ENST00000498694 CCDC141Q6ZP82 1450 aa6.31□□□□□ -1.4
CTPS1-212ENST00000498694 MBD5Q9P267 1494 aa6.31□□□□□ -1.4
CTPS1-212ENST00000498694 PSDA5PKW4 1024 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms