RNA–Protein interactions for RNA: ENST00000498574.1

IGKV1-39-201, Transcript of immunoglobulin kappa variable 1-39 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene IGKV1-39, Length 398 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1-39-201ENST00000498574 C19orf44Q9H6X5 657 aa13.13□□□□□ -0.31
IGKV1-39-201ENST00000498574 USP21Q9UK80 565 aa13.13□□□□□ -0.31
IGKV1-39-201ENST00000498574 LRP5O75197 1615 aa13.13□□□□□ -0.31
IGKV1-39-201ENST00000498574 TET3O43151 1660 aa13.12□□□□□ -0.31
IGKV1-39-201ENST00000498574 RSPH4AQ5TD94 716 aa13.11□□□□□ -0.31
IGKV1-39-201ENST00000498574 DEFB132Q7Z7B7 95 aa13.11□□□□□ -0.31
IGKV1-39-201ENST00000498574 NCOA3Q9Y6Q9 1424 aa13.11□□□□□ -0.31
IGKV1-39-201ENST00000498574 DIP2AQ14689 1571 aa13.11□□□□□ -0.31
IGKV1-39-201ENST00000498574 NWD1Q149M9 1564 aa13.11□□□□□ -0.31
IGKV1-39-201ENST00000498574 KDM5AP29375 1690 aaKnown RBP13.1□□□□□ -0.31
IGKV1-39-201ENST00000498574 HRCP23327 699 aa13.1□□□□□ -0.31
IGKV1-39-201ENST00000498574 SETD5Q9C0A6 1442 aa13.1□□□□□ -0.31
IGKV1-39-201ENST00000498574 PSDA5PKW4 1024 aaPredicted RBP13.09□□□□□ -0.31
IGKV1-39-201ENST00000498574 TSPY4P0CV99 314 aa13.08□□□□□ -0.32
IGKV1-39-201ENST00000498574 TSPY10P0CW01 314 aa13.08□□□□□ -0.32
IGKV1-39-201ENST00000498574 SF3B2Q13435 895 aaKnown RBP13.08□□□□□ -0.32
IGKV1-39-201ENST00000498574 BLMP54132 1417 aaPredicted RBP13.07□□□□□ -0.32
IGKV1-39-201ENST00000498574 IDI1Q13907 227 aa13.07□□□□□ -0.32
IGKV1-39-201ENST00000498574 CCDC141Q6ZP82 1450 aa13.07□□□□□ -0.32
IGKV1-39-201ENST00000498574 CFAP65Q6ZU64 1925 aaKnown RBP13.06□□□□□ -0.32
IGKV1-39-201ENST00000498574 PNPLA6Q8IY17 1366 aa13.06□□□□□ -0.32
IGKV1-39-201ENST00000498574 CAMSAP2Q08AD1 1489 aa13.05□□□□□ -0.32
IGKV1-39-201ENST00000498574 FNBP4Q8N3X1 1017 aaPredicted RBP13.05□□□□□ -0.32
IGKV1-39-201ENST00000498574 EFCAB6Q5THR3 1501 aa13.04□□□□□ -0.32
IGKV1-39-201ENST00000498574 MTUS2Q5JR59 1369 aa13.04□□□□□ -0.32
IGKV1-39-201ENST00000498574 MAST1Q9Y2H9 1570 aa13.03□□□□□ -0.32
IGKV1-39-201ENST00000498574 SENP3-EIF4A1A0A087X0R7 540 aa13.03□□□□□ -0.32
IGKV1-39-201ENST00000498574 ATRNO75882 1429 aa13.03□□□□□ -0.32
IGKV1-39-201ENST00000498574 PIK3C2BO00750 1634 aa13.02□□□□□ -0.32
IGKV1-39-201ENST00000498574 DDX17Q92841 729 aaKnown RBP13.02□□□□□ -0.33
IGKV1-39-201ENST00000498574 ARHGAP31Q2M1Z3 1444 aa13.02□□□□□ -0.33
IGKV1-39-201ENST00000498574 TBX22Q9Y458 520 aa13.01□□□□□ -0.33
IGKV1-39-201ENST00000498574 FYCO1Q9BQS8 1478 aa13.01□□□□□ -0.33
IGKV1-39-201ENST00000498574 NHSL1Q5SYE7 1610 aa13.01□□□□□ -0.33
IGKV1-39-201ENST00000498574 ASXL1Q8IXJ9 1541 aa13□□□□□ -0.33
IGKV1-39-201ENST00000498574 PPP1R15AO75807 674 aaPredicted RBP13□□□□□ -0.33
IGKV1-39-201ENST00000498574 GJD4Q96KN9 370 aaPredicted RBP13□□□□□ -0.33
IGKV1-39-201ENST00000498574 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.99□□□□□ -0.33
IGKV1-39-201ENST00000498574 MROH1Q8NDA8 1641 aa12.99□□□□□ -0.33
IGKV1-39-201ENST00000498574 PLEKHG1Q9ULL1 1385 aa12.98□□□□□ -0.33
IGKV1-39-201ENST00000498574 HDGFP51858 240 aaKnown RBP12.98□□□□□ -0.33
IGKV1-39-201ENST00000498574 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.98□□□□□ -0.33
IGKV1-39-201ENST00000498574 BCL9LQ86UU0 1499 aa12.97□□□□□ -0.33
IGKV1-39-201ENST00000498574 DCAF8L1A6NGE4 600 aa12.96□□□□□ -0.33
IGKV1-39-201ENST00000498574 CHD2O14647 1828 aaKnown RBP12.96□□□□□ -0.33
IGKV1-39-201ENST00000498574 R3HDM1Q15032 1099 aaKnown RBP12.95□□□□□ -0.34
IGKV1-39-201ENST00000498574 CEP152O94986 1710 aa12.95□□□□□ -0.34
IGKV1-39-201ENST00000498574 PTCH1Q13635 1447 aa12.95□□□□□ -0.34
IGKV1-39-201ENST00000498574 BAG6P46379 1132 aa12.94□□□□□ -0.34
IGKV1-39-201ENST00000498574 DCCP43146 1447 aa12.94□□□□□ -0.34
IGKV1-39-201ENST00000498574 SLC52A1Q9NWF4 448 aa12.93□□□□□ -0.34
IGKV1-39-201ENST00000498574 AMOTL2Q9Y2J4 779 aa12.93□□□□□ -0.34
IGKV1-39-201ENST00000498574 MST1RQ04912 1400 aa12.93□□□□□ -0.34
IGKV1-39-201ENST00000498574 EIF2AK4Q9P2K8 1649 aaKnown RBP12.91□□□□□ -0.34
IGKV1-39-201ENST00000498574 PIK3R4Q99570 1358 aa12.91□□□□□ -0.34
IGKV1-39-201ENST00000498574 ZFYVE9O95405 1425 aa12.9□□□□□ -0.34
IGKV1-39-201ENST00000498574 RIMS2Q9UQ26 1411 aa12.9□□□□□ -0.34
IGKV1-39-201ENST00000498574 ZNF784Q8NCA9 323 aaPredicted RBP12.9□□□□□ -0.34
IGKV1-39-201ENST00000498574 CEP162Q5TB80 1403 aa12.89□□□□□ -0.35
IGKV1-39-201ENST00000498574 ADGRB3O60242 1522 aa12.89□□□□□ -0.35
IGKV1-39-201ENST00000498574 C1QTNF8P60827 252 aa12.89□□□□□ -0.35
IGKV1-39-201ENST00000498574 SEPT12Q8IYM1 358 aa12.89□□□□□ -0.35
IGKV1-39-201ENST00000498574 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.89□□□□□ -0.35
IGKV1-39-201ENST00000498574 KANK1Q14678 1352 aa12.89□□□□□ -0.35
IGKV1-39-201ENST00000498574 ARHGEF5Q12774 1597 aa12.88□□□□□ -0.35
IGKV1-39-201ENST00000498574 ADAMTS13Q76LX8 1427 aa12.88□□□□□ -0.35
IGKV1-39-201ENST00000498574 SOS2Q07890 1332 aaPredicted RBP12.88□□□□□ -0.35
IGKV1-39-201ENST00000498574 EN1Q05925 392 aaPredicted RBP12.87□□□□□ -0.35
IGKV1-39-201ENST00000498574 UNC5CLQ8IV45 518 aa12.87□□□□□ -0.35
IGKV1-39-201ENST00000498574 UNC13BO14795 1591 aa12.86□□□□□ -0.35
IGKV1-39-201ENST00000498574 RALGAPBQ86X10 1494 aa12.86□□□□□ -0.35
IGKV1-39-201ENST00000498574 KRT27Q7Z3Y8 459 aa12.86□□□□□ -0.35
IGKV1-39-201ENST00000498574 NOS1P29475 1434 aa12.85□□□□□ -0.35
IGKV1-39-201ENST00000498574 EHBP1L1Q8N3D4 1523 aa12.84□□□□□ -0.35
IGKV1-39-201ENST00000498574 DUOX2Q9NRD8 1548 aa12.84□□□□□ -0.35
IGKV1-39-201ENST00000498574 PTPRUQ92729 1446 aa12.84□□□□□ -0.35
IGKV1-39-201ENST00000498574 PPP1R1BQ9UD71 204 aaPredicted RBP12.83□□□□□ -0.36
IGKV1-39-201ENST00000498574 CHGAP10645 457 aaKnown RBP12.82□□□□□ -0.36
IGKV1-39-201ENST00000498574 ORAI2Q96SN7 254 aa12.82□□□□□ -0.36
IGKV1-39-201ENST00000498574 RRP7BPQ9NSQ0 103 aa12.82□□□□□ -0.36
IGKV1-39-201ENST00000498574 KIF15Q9NS87 1388 aa12.81□□□□□ -0.36
IGKV1-39-201ENST00000498574 MYOM2P54296 1465 aa12.8□□□□□ -0.36
IGKV1-39-201ENST00000498574 TRPM2O94759 1503 aa12.8□□□□□ -0.36
IGKV1-39-201ENST00000498574 ONECUT3O60422 494 aaPredicted RBP12.8□□□□□ -0.36
IGKV1-39-201ENST00000498574 GLI3P10071 1580 aa12.8□□□□□ -0.36
IGKV1-39-201ENST00000498574 C1orf167Q5SNV9 1468 aa12.79□□□□□ -0.36
IGKV1-39-201ENST00000498574 ERBINQ96RT1 1412 aa12.79□□□□□ -0.36
IGKV1-39-201ENST00000498574 A0A0G2JS52 829 aa12.78□□□□□ -0.36
IGKV1-39-201ENST00000498574 MYT1Q01538 1121 aa12.78□□□□□ -0.36
IGKV1-39-201ENST00000498574 CCDC9Q9Y3X0 531 aaKnown RBP12.78□□□□□ -0.36
IGKV1-39-201ENST00000498574 ADGRL3Q9HAR2 1447 aa12.78□□□□□ -0.36
IGKV1-39-201ENST00000498574 LMTK2Q8IWU2 1503 aa12.78□□□□□ -0.36
IGKV1-39-201ENST00000498574 SPHKAPQ2M3C7 1700 aa12.77□□□□□ -0.36
IGKV1-39-201ENST00000498574 VPS72Q15906 364 aa12.77□□□□□ -0.37
IGKV1-39-201ENST00000498574 EZH2Q15910 746 aaKnown RBP12.77□□□□□ -0.37
IGKV1-39-201ENST00000498574 NINLQ9Y2I6 1382 aa12.77□□□□□ -0.37
IGKV1-39-201ENST00000498574 BRWD3Q6RI45 1802 aa12.76□□□□□ -0.37
IGKV1-39-201ENST00000498574 SPON1Q9HCB6 807 aa12.76□□□□□ -0.37
IGKV1-39-201ENST00000498574 RPRD2Q5VT52 1461 aaKnown RBP12.76□□□□□ -0.37
IGKV1-39-201ENST00000498574 CEP350Q5VT06 3117 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms