RNA–Protein interactions for RNA: ENST00000498474.2

PUDP-205, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 4

Gene PUDP, Length 1,040 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-205ENST00000498474 ZFYVE16Q7Z3T8 1539 aa12.85□□□□□ -0.35
PUDP-205ENST00000498474 AFAP1Q8N556 730 aa12.85□□□□□ -0.35
PUDP-205ENST00000498474 CCDC18Q5T9S5 1454 aa12.83□□□□□ -0.36
PUDP-205ENST00000498474 FYCO1Q9BQS8 1478 aa12.83□□□□□ -0.36
PUDP-205ENST00000498474 CDC42BPAQ5VT25 1732 aa12.82□□□□□ -0.36
PUDP-205ENST00000498474 LOC105371045A0A1W2PR82 267 aa12.82□□□□□ -0.36
PUDP-205ENST00000498474 MYT1LQ9UL68 1186 aa12.82□□□□□ -0.36
PUDP-205ENST00000498474 PREX2Q70Z35 1606 aa12.81□□□□□ -0.36
PUDP-205ENST00000498474 ARHGEF12Q9NZN5 1544 aa12.81□□□□□ -0.36
PUDP-205ENST00000498474 SPNS2Q8IVW8 549 aa12.8□□□□□ -0.36
PUDP-205ENST00000498474 KRTAP3-3Q9BYR6 98 aa12.8□□□□□ -0.36
PUDP-205ENST00000498474 KRTAP3-2Q9BYR7 98 aa12.8□□□□□ -0.36
PUDP-205ENST00000498474 ZNF777Q9ULD5 760 aaPredicted RBP12.8□□□□□ -0.36
PUDP-205ENST00000498474 TRAPPC8Q9Y2L5 1435 aa12.79□□□□□ -0.36
PUDP-205ENST00000498474 MAGI2Q86UL8 1455 aa12.79□□□□□ -0.36
PUDP-205ENST00000498474 PPP1R37O75864 691 aa12.79□□□□□ -0.36
PUDP-205ENST00000498474 ITSN2Q9NZM3 1697 aa12.78□□□□□ -0.36
PUDP-205ENST00000498474 FER1L4A9Z1Z3 1794 aa12.78□□□□□ -0.36
PUDP-205ENST00000498474 CEP162Q5TB80 1403 aa12.78□□□□□ -0.36
PUDP-205ENST00000498474 ATP10AO60312 1499 aa12.78□□□□□ -0.36
PUDP-205ENST00000498474 ZNF518AQ6AHZ1 1483 aa12.78□□□□□ -0.36
PUDP-205ENST00000498474 RIMBP2O15034 1052 aa12.77□□□□□ -0.37
PUDP-205ENST00000498474 ERBB3P21860 1342 aa12.77□□□□□ -0.37
PUDP-205ENST00000498474 ABCC1P33527 1531 aa12.77□□□□□ -0.37
PUDP-205ENST00000498474 KDM5CP41229 1560 aa12.77□□□□□ -0.37
PUDP-205ENST00000498474 GPR153Q6NV75 609 aa12.76□□□□□ -0.37
PUDP-205ENST00000498474 C9orf84Q5VXU9 1444 aa12.76□□□□□ -0.37
PUDP-205ENST00000498474 ABCA6Q8N139 1617 aa12.76□□□□□ -0.37
PUDP-205ENST00000498474 C2orf72A6NCS6 295 aa12.75□□□□□ -0.37
PUDP-205ENST00000498474 HNRNPMP52272 730 aaKnown RBP eCLIP12.75□□□□□ -0.37
PUDP-205ENST00000498474 SAMD9LQ8IVG5 1584 aa12.75□□□□□ -0.37
PUDP-205ENST00000498474 GPATCH8Q9UKJ3 1502 aaKnown RBP12.75□□□□□ -0.37
PUDP-205ENST00000498474 DIP2CQ9Y2E4 1556 aa12.75□□□□□ -0.37
PUDP-205ENST00000498474 KIF3CO14782 793 aa12.74□□□□□ -0.37
PUDP-205ENST00000498474 CEBPAP49715 358 aaPredicted RBP12.74□□□□□ -0.37
PUDP-205ENST00000498474 HSPA2P54652 639 aa12.74□□□□□ -0.37
PUDP-205ENST00000498474 MMRN1Q13201 1228 aa12.74□□□□□ -0.37
PUDP-205ENST00000498474 ARSIQ5FYB1 569 aa12.73□□□□□ -0.37
PUDP-205ENST00000498474 KIDINS220Q9ULH0 1771 aa12.73□□□□□ -0.37
PUDP-205ENST00000498474 SYCP2Q9BX26 1530 aa12.72□□□□□ -0.37
PUDP-205ENST00000498474 LMTK3Q96Q04 1460 aa12.72□□□□□ -0.37
PUDP-205ENST00000498474 MTUS2Q5JR59 1369 aa12.72□□□□□ -0.37
PUDP-205ENST00000498474 VARS2Q5ST30 1063 aaKnown RBP12.72□□□□□ -0.37
PUDP-205ENST00000498474 HS6ST3Q8IZP7 471 aa12.72□□□□□ -0.37
PUDP-205ENST00000498474 KHSRPQ92945 711 aaKnown RBP eCLIP12.72□□□□□ -0.37
PUDP-205ENST00000498474 ZSWIM6Q9HCJ5 1215 aa12.72□□□□□ -0.37
PUDP-205ENST00000498474 ZNF644Q9H582 1327 aaPredicted RBP12.71□□□□□ -0.37
PUDP-205ENST00000498474 CFDP1Q9UEE9 299 aaPredicted RBP12.71□□□□□ -0.37
PUDP-205ENST00000498474 MLH3Q9UHC1 1453 aa12.71□□□□□ -0.38
PUDP-205ENST00000498474 CCNB3Q8WWL7 1395 aa12.7□□□□□ -0.38
PUDP-205ENST00000498474 CHGAP10645 457 aaKnown RBP12.7□□□□□ -0.38
PUDP-205ENST00000498474 TIAM1Q13009 1591 aa12.69□□□□□ -0.38
PUDP-205ENST00000498474 SUPT6HQ7KZ85 1726 aaKnown RBP12.68□□□□□ -0.38
PUDP-205ENST00000498474 EHBP1L1Q8N3D4 1523 aa12.67□□□□□ -0.38
PUDP-205ENST00000498474 SPAG9O60271 1321 aaKnown RBP12.66□□□□□ -0.38
PUDP-205ENST00000498474 REREQ9P2R6 1566 aa12.65□□□□□ -0.38
PUDP-205ENST00000498474 C3P01024 1663 aa12.64□□□□□ -0.39
PUDP-205ENST00000498474 ATP7AQ04656 1500 aa12.63□□□□□ -0.39
PUDP-205ENST00000498474 NKX1-1Q15270 411 aaPredicted RBP12.63□□□□□ -0.39
PUDP-205ENST00000498474 TMC2Q8TDI7 906 aa12.63□□□□□ -0.39
PUDP-205ENST00000498474 AGLP35573 1532 aa12.62□□□□□ -0.39
PUDP-205ENST00000498474 PREX1Q8TCU6 1659 aa12.62□□□□□ -0.39
PUDP-205ENST00000498474 INO80Q9ULG1 1556 aaPredicted RBP12.62□□□□□ -0.39
PUDP-205ENST00000498474 NCOA2Q15596 1464 aa12.62□□□□□ -0.39
PUDP-205ENST00000498474 KANK4Q5T7N3 995 aaPredicted RBP12.62□□□□□ -0.39
PUDP-205ENST00000498474 KIAA1107Q9UPP5 1409 aa12.62□□□□□ -0.39
PUDP-205ENST00000498474 ESF1Q9H501 851 aaKnown RBP12.61□□□□□ -0.39
PUDP-205ENST00000498474 SETD1BQ9UPS6 1966 aaKnown RBP12.61□□□□□ -0.39
PUDP-205ENST00000498474 VPS8Q8N3P4 1428 aa12.61□□□□□ -0.39
PUDP-205ENST00000498474 PLEKHH2Q8IVE3 1493 aa12.6□□□□□ -0.39
PUDP-205ENST00000498474 MBD5Q9P267 1494 aa12.6□□□□□ -0.39
PUDP-205ENST00000498474 GGT6Q6P531 493 aa12.59□□□□□ -0.39
PUDP-205ENST00000498474 ZNF687Q8N1G0 1237 aa12.59□□□□□ -0.39
PUDP-205ENST00000498474 A2MP01023 1474 aa12.59□□□□□ -0.39
PUDP-205ENST00000498474 CLTCQ00610 1675 aaKnown RBP12.58□□□□□ -0.4
PUDP-205ENST00000498474 NUDT7P0C024 238 aa12.58□□□□□ -0.4
PUDP-205ENST00000498474 CAMSAP2Q08AD1 1489 aa12.58□□□□□ -0.4
PUDP-205ENST00000498474 LRRC9Q6ZRR7 1453 aa12.58□□□□□ -0.4
PUDP-205ENST00000498474 PLXNC1O60486 1568 aa12.57□□□□□ -0.4
PUDP-205ENST00000498474 STRCQ7RTU9 1775 aa12.57□□□□□ -0.4
PUDP-205ENST00000498474 ZNF316A6NFI3 1004 aaPredicted RBP12.57□□□□□ -0.4
PUDP-205ENST00000498474 ADGBQ8N7X0 1667 aa12.57□□□□□ -0.4
PUDP-205ENST00000498474 UHRF1BP1Q6BDS2 1440 aa12.56□□□□□ -0.4
PUDP-205ENST00000498474 PCDHGA4Q9Y5G9 962 aa12.56□□□□□ -0.4
PUDP-205ENST00000498474 ZMYM3Q14202 1370 aa12.55□□□□□ -0.4
PUDP-205ENST00000498474 SLC34A2O95436 690 aa12.54□□□□□ -0.4
PUDP-205ENST00000498474 CCDC141Q6ZP82 1450 aa12.53□□□□□ -0.4
PUDP-205ENST00000498474 MROH2AA6NES4 1674 aa12.53□□□□□ -0.4
PUDP-205ENST00000498474 CNTLNQ9NXG0 1405 aa12.53□□□□□ -0.4
PUDP-205ENST00000498474 FBXO41Q8TF61 875 aa12.52□□□□□ -0.41
PUDP-205ENST00000498474 KIF3BO15066 747 aa12.51□□□□□ -0.41
PUDP-205ENST00000498474 LHX6Q9UPM6 363 aa12.51□□□□□ -0.41
PUDP-205ENST00000498474 DHX29Q7Z478 1369 aaKnown RBP12.51□□□□□ -0.41
PUDP-205ENST00000498474 RTEL1-TNFRSF6BF6WH68 1400 aa12.51□□□□□ -0.41
PUDP-205ENST00000498474 ARHGEF5Q12774 1597 aa12.49□□□□□ -0.41
PUDP-205ENST00000498474 DSG2Q14126 1118 aa12.49□□□□□ -0.41
PUDP-205ENST00000498474 GPHNQ9NQX3 736 aaPredicted RBP12.49□□□□□ -0.41
PUDP-205ENST00000498474 PTPRKQ15262 1439 aa12.48□□□□□ -0.41
PUDP-205ENST00000498474 TSPY4P0CV99 314 aa12.48□□□□□ -0.41
PUDP-205ENST00000498474 TSPY10P0CW01 314 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms