RNA–Protein interactions for RNA: ENST00000498226.5

SOX2-OT-217, SOX2 overlapping transcript, humanhuman

TSL 4

Gene SOX2-OT, Length 560 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-217ENST00000498226 SLC4A3P48751 1232 aa10.56□□□□□ -0.72
SOX2-OT-217ENST00000498226 SLF2Q8IX21 1173 aa10.56□□□□□ -0.72
SOX2-OT-217ENST00000498226 NECTIN2Q92692 538 aa10.56□□□□□ -0.72
SOX2-OT-217ENST00000498226 BARGINQ6ZT62 677 aa10.55□□□□□ -0.72
SOX2-OT-217ENST00000498226 WBP1LQ9NX94 342 aa10.54□□□□□ -0.72
SOX2-OT-217ENST00000498226 RNF40O75150 1001 aa10.53□□□□□ -0.72
SOX2-OT-217ENST00000498226 PPP4CP60510 307 aa10.53□□□□□ -0.72
SOX2-OT-217ENST00000498226 CCDC102AQ96A19 550 aa10.53□□□□□ -0.72
SOX2-OT-217ENST00000498226 PHOX2BQ99453 314 aa10.51□□□□□ -0.73
SOX2-OT-217ENST00000498226 KRI1Q8N9T8 703 aaKnown RBP10.5□□□□□ -0.73
SOX2-OT-217ENST00000498226 DAXXQ9UER7 740 aaPredicted RBP10.49□□□□□ -0.73
SOX2-OT-217ENST00000498226 NLRP7Q8WX94 980 aa10.45□□□□□ -0.74
SOX2-OT-217ENST00000498226 PRR14Q9BWN1 585 aa10.45□□□□□ -0.74
SOX2-OT-217ENST00000498226 RSPH4AQ5TD94 716 aa10.44□□□□□ -0.74
SOX2-OT-217ENST00000498226 SULF1Q8IWU6 871 aa10.44□□□□□ -0.74
SOX2-OT-217ENST00000498226 APLP1P51693 650 aa10.43□□□□□ -0.74
SOX2-OT-217ENST00000498226 PLA2G2EQ9NZK7 142 aa10.43□□□□□ -0.74
SOX2-OT-217ENST00000498226 ITGBL1O95965 494 aaPredicted RBP10.42□□□□□ -0.74
SOX2-OT-217ENST00000498226 SLC10A3P09131 477 aa10.42□□□□□ -0.74
SOX2-OT-217ENST00000498226 CFHP08603 1231 aa10.41□□□□□ -0.74
SOX2-OT-217ENST00000498226 MDM2Q00987 491 aaPredicted RBP10.41□□□□□ -0.74
SOX2-OT-217ENST00000498226 KMT5BQ4FZB7 885 aa10.41□□□□□ -0.74
SOX2-OT-217ENST00000498226 AK7Q96M32 723 aa10.41□□□□□ -0.74
SOX2-OT-217ENST00000498226 DDX11L8A8MPP1 907 aa10.4□□□□□ -0.74
SOX2-OT-217ENST00000498226 CLCN1P35523 988 aa10.4□□□□□ -0.74
SOX2-OT-217ENST00000498226 AMHR2Q16671 573 aa10.4□□□□□ -0.74
SOX2-OT-217ENST00000498226 IFFO2Q5TF58 517 aa10.4□□□□□ -0.74
SOX2-OT-217ENST00000498226 GPCPD1Q9NPB8 672 aa10.4□□□□□ -0.74
SOX2-OT-217ENST00000498226 RDH13Q8NBN7 331 aa10.39□□□□□ -0.75
SOX2-OT-217ENST00000498226 ACTN4O43707 911 aaKnown RBP10.38□□□□□ -0.75
SOX2-OT-217ENST00000498226 TMUB1Q9BVT8 246 aa10.38□□□□□ -0.75
SOX2-OT-217ENST00000498226 SLC24A3Q9HC58 644 aa10.37□□□□□ -0.75
SOX2-OT-217ENST00000498226 TRIM66O15016 1216 aa10.36□□□□□ -0.75
SOX2-OT-217ENST00000498226 MTRQ99707 1265 aa10.36□□□□□ -0.75
SOX2-OT-217ENST00000498226 CD46P15529 392 aa10.35□□□□□ -0.75
SOX2-OT-217ENST00000498226 KCNC4Q03721 635 aa10.35□□□□□ -0.75
SOX2-OT-217ENST00000498226 TTLL12Q14166 644 aaPredicted RBP10.35□□□□□ -0.75
SOX2-OT-217ENST00000498226 TJAP1Q5JTD0 557 aa10.35□□□□□ -0.75
SOX2-OT-217ENST00000498226 IL21Q9HBE4 155 aa10.35□□□□□ -0.75
SOX2-OT-217ENST00000498226 PCDHB3Q9Y5E6 796 aa10.35□□□□□ -0.75
SOX2-OT-217ENST00000498226 FAM217BQ9NTX9 383 aaPredicted RBP10.34□□□□□ -0.75
SOX2-OT-217ENST00000498226 GCGRP47871 477 aa10.33□□□□□ -0.76
SOX2-OT-217ENST00000498226 REPIN1Q9BWE0 567 aaKnown RBP10.32□□□□□ -0.76
SOX2-OT-217ENST00000498226 COPS2P61201 443 aa10.3□□□□□ -0.76
SOX2-OT-217ENST00000498226 BLOC1S3Q6QNY0 202 aa10.3□□□□□ -0.76
SOX2-OT-217ENST00000498226 GIGYF2Q6Y7W6 1299 aaKnown RBP10.3□□□□□ -0.76
SOX2-OT-217ENST00000498226 PARP9Q8IXQ6 854 aa10.3□□□□□ -0.76
SOX2-OT-217ENST00000498226 PDE4DQ08499 809 aa10.29□□□□□ -0.76
SOX2-OT-217ENST00000498226 SSTR3P32745 418 aaPredicted RBP10.28□□□□□ -0.76
SOX2-OT-217ENST00000498226 FUT2Q10981 343 aa10.28□□□□□ -0.76
SOX2-OT-217ENST00000498226 ZPR1O75312 459 aa10.27□□□□□ -0.77
SOX2-OT-217ENST00000498226 NR1I2O75469 434 aa10.27□□□□□ -0.77
SOX2-OT-217ENST00000498226 ATP6V1AP38606 617 aa10.27□□□□□ -0.77
SOX2-OT-217ENST00000498226 ZNF516Q92618 1163 aa10.27□□□□□ -0.77
SOX2-OT-217ENST00000498226 A0A0G2JS52 829 aa10.26□□□□□ -0.77
SOX2-OT-217ENST00000498226 GRIPAP1Q4V328 841 aa10.26□□□□□ -0.77
SOX2-OT-217ENST00000498226 KDM4AO75164 1064 aa10.25□□□□□ -0.77
SOX2-OT-217ENST00000498226 USP46P62068 366 aa10.25□□□□□ -0.77
SOX2-OT-217ENST00000498226 PUS10Q3MIT2 529 aaKnown RBP10.24□□□□□ -0.77
SOX2-OT-217ENST00000498226 MORN1Q5T089 497 aa10.24□□□□□ -0.77
SOX2-OT-217ENST00000498226 TPRNQ4KMQ1 711 aa10.22□□□□□ -0.77
SOX2-OT-217ENST00000498226 SCUBE3Q8IX30 993 aa10.22□□□□□ -0.77
SOX2-OT-217ENST00000498226 MS4A1P11836 297 aa10.21□□□□□ -0.77
SOX2-OT-217ENST00000498226 NUTM1Q86Y26 1132 aa10.21□□□□□ -0.77
SOX2-OT-217ENST00000498226 HOXA2O43364 376 aa10.2□□□□□ -0.78
SOX2-OT-217ENST00000498226 TLL1O43897 1013 aa10.2□□□□□ -0.78
SOX2-OT-217ENST00000498226 BEGAINQ9BUH8 593 aa10.2□□□□□ -0.78
SOX2-OT-217ENST00000498226 NKX2-3Q8TAU0 364 aa10.19□□□□□ -0.78
SOX2-OT-217ENST00000498226 SLC27A5Q9Y2P5 690 aa10.19□□□□□ -0.78
SOX2-OT-217ENST00000498226 SALL2Q9Y467 1007 aaPredicted RBP10.19□□□□□ -0.78
SOX2-OT-217ENST00000498226 ADH1BP00325 375 aa10.18□□□□□ -0.78
SOX2-OT-217ENST00000498226 RGS20O76081 388 aa10.17□□□□□ -0.78
SOX2-OT-217ENST00000498226 DIXDC1Q155Q3 683 aa10.17□□□□□ -0.78
SOX2-OT-217ENST00000498226 SPIRE2Q8WWL2 714 aa10.17□□□□□ -0.78
SOX2-OT-217ENST00000498226 FMNL1O95466 1100 aaPredicted RBP10.16□□□□□ -0.78
SOX2-OT-217ENST00000498226 GGCXP38435 758 aa10.16□□□□□ -0.78
SOX2-OT-217ENST00000498226 Q3C1V9 767 aa10.16□□□□□ -0.78
SOX2-OT-217ENST00000498226 THAP11Q96EK4 314 aa10.16□□□□□ -0.78
SOX2-OT-217ENST00000498226 SPSB2Q99619 263 aa10.16□□□□□ -0.78
SOX2-OT-217ENST00000498226 PPP1R18Q6NYC8 613 aa10.15□□□□□ -0.78
SOX2-OT-217ENST00000498226 BRICD5Q6PL45 260 aa10.14□□□□□ -0.79
SOX2-OT-217ENST00000498226 HLA-CQ95604 372 aa10.14□□□□□ -0.79
SOX2-OT-217ENST00000498226 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.14□□□□□ -0.79
SOX2-OT-217ENST00000498226 KDM4CQ9H3R0 1056 aa10.13□□□□□ -0.79
SOX2-OT-217ENST00000498226 GPBP1L1Q9HC44 474 aaPredicted RBP10.13□□□□□ -0.79
SOX2-OT-217ENST00000498226 RNF19BQ6ZMZ0 732 aa10.12□□□□□ -0.79
SOX2-OT-217ENST00000498226 TBC1D2Q9BYX2 928 aa10.12□□□□□ -0.79
SOX2-OT-217ENST00000498226 SLC6A16Q9GZN6 736 aa10.12□□□□□ -0.79
SOX2-OT-217ENST00000498226 S1PR4O95977 384 aa10.11□□□□□ -0.79
SOX2-OT-217ENST00000498226 FDX1P10109 184 aa10.11□□□□□ -0.79
SOX2-OT-217ENST00000498226 GJA5P36382 358 aa10.11□□□□□ -0.79
SOX2-OT-217ENST00000498226 GUCA2AQ02747 115 aa10.11□□□□□ -0.79
SOX2-OT-217ENST00000498226 MOXD2PA6NHM9 499 aa10.1□□□□□ -0.79
SOX2-OT-217ENST00000498226 MSS51Q4VC12 460 aa10.1□□□□□ -0.79
SOX2-OT-217ENST00000498226 RNF223E7ERA6 249 aa10.08□□□□□ -0.8
SOX2-OT-217ENST00000498226 NDUFV2P19404 249 aa10.08□□□□□ -0.8
SOX2-OT-217ENST00000498226 RSBN1LQ6PCB5 846 aaPredicted RBP10.08□□□□□ -0.8
SOX2-OT-217ENST00000498226 FAM160A2Q8N612 972 aaPredicted RBP10.08□□□□□ -0.8
SOX2-OT-217ENST00000498226 ANKLE1Q8NAG6 615 aa10.08□□□□□ -0.8
SOX2-OT-217ENST00000498226 DDRGK1Q96HY6 314 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms