RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 TNRQ92752 1358 aa17.12■□□□□ 0.33
AFF3-215ENST00000498090 RGL3Q3MIN7 710 aa17.12■□□□□ 0.33
AFF3-215ENST00000498090 KIF1BO60333 1816 aa17.11■□□□□ 0.33
AFF3-215ENST00000498090 SLC52A1Q9NWF4 448 aa17.11■□□□□ 0.33
AFF3-215ENST00000498090 TMEM131LA2VDJ0 1609 aa17.09■□□□□ 0.33
AFF3-215ENST00000498090 NBPF8Q3BBV2 869 aa17.08■□□□□ 0.32
AFF3-215ENST00000498090 CHGAP10645 457 aaKnown RBP17.07■□□□□ 0.32
AFF3-215ENST00000498090 ERICH6BQ5W0A0 696 aa17.07■□□□□ 0.32
AFF3-215ENST00000498090 TSHZ2Q9NRE2 1034 aa17.07■□□□□ 0.32
AFF3-215ENST00000498090 POLR1AO95602 1720 aaPredicted RBP17.07■□□□□ 0.32
AFF3-215ENST00000498090 UHRF1BP1Q6BDS2 1440 aa17.07■□□□□ 0.32
AFF3-215ENST00000498090 DCAF11Q8TEB1 546 aa17.07■□□□□ 0.32
AFF3-215ENST00000498090 IFT172Q9UG01 1749 aa17.06■□□□□ 0.32
AFF3-215ENST00000498090 LMTK3Q96Q04 1460 aa17.05■□□□□ 0.32
AFF3-215ENST00000498090 A2ML1A8K2U0 1454 aa17.05■□□□□ 0.32
AFF3-215ENST00000498090 NLRP1Q9C000 1473 aa17.05■□□□□ 0.32
AFF3-215ENST00000498090 PRAG1Q86YV5 1406 aa17.05■□□□□ 0.32
AFF3-215ENST00000498090 MYO3AQ8NEV4 1616 aa17.05■□□□□ 0.32
AFF3-215ENST00000498090 MYO5BQ9ULV0 1848 aa17.04■□□□□ 0.32
AFF3-215ENST00000498090 HNRNPUQ00839 825 aaKnown RBP eCLIP17.04■□□□□ 0.32
AFF3-215ENST00000498090 PRKRIP1Q9H875 184 aaPredicted RBP17.04■□□□□ 0.32
AFF3-215ENST00000498090 KDM2AQ9Y2K7 1162 aa17.04■□□□□ 0.32
AFF3-215ENST00000498090 NEXMIFQ5QGS0 1516 aa17.04■□□□□ 0.32
AFF3-215ENST00000498090 MYOM2P54296 1465 aa17.04■□□□□ 0.32
AFF3-215ENST00000498090 PPLO60437 1756 aa17.03■□□□□ 0.32
AFF3-215ENST00000498090 ZNF326Q5BKZ1 582 aaKnown RBP17.02■□□□□ 0.32
AFF3-215ENST00000498090 KIF7Q2M1P5 1343 aa17.02■□□□□ 0.31
AFF3-215ENST00000498090 UBR1Q8IWV7 1749 aa17.01■□□□□ 0.31
AFF3-215ENST00000498090 NRXN1Q9ULB1 1477 aa17■□□□□ 0.31
AFF3-215ENST00000498090 KDM5AP29375 1690 aaKnown RBP17■□□□□ 0.31
AFF3-215ENST00000498090 C11orf95C9JLR9 678 aaPredicted RBP17■□□□□ 0.31
AFF3-215ENST00000498090 ROCK2O75116 1388 aaKnown RBP17■□□□□ 0.31
AFF3-215ENST00000498090 RALGAPBQ86X10 1494 aa17■□□□□ 0.31
AFF3-215ENST00000498090 RPGRIP1LQ68CZ1 1315 aa16.99■□□□□ 0.31
AFF3-215ENST00000498090 ADGRF5Q8IZF2 1346 aa16.99■□□□□ 0.31
AFF3-215ENST00000498090 HSPA2P54652 639 aa16.98■□□□□ 0.31
AFF3-215ENST00000498090 TRPM1Q7Z4N2 1603 aa16.98■□□□□ 0.31
AFF3-215ENST00000498090 ZFYVE9O95405 1425 aa16.98■□□□□ 0.31
AFF3-215ENST00000498090 CEP170BQ9Y4F5 1589 aaPredicted RBP16.98■□□□□ 0.31
AFF3-215ENST00000498090 STAG3Q9UJ98 1225 aa16.97■□□□□ 0.31
AFF3-215ENST00000498090 USP47Q96K76 1375 aa16.97■□□□□ 0.31
AFF3-215ENST00000498090 ZNF142P52746 1687 aaPredicted RBP16.96■□□□□ 0.31
AFF3-215ENST00000498090 BCANQ96GW7 911 aa16.96■□□□□ 0.31
AFF3-215ENST00000498090 STAC3Q96MF2 364 aa16.96■□□□□ 0.31
AFF3-215ENST00000498090 RIMS2Q9UQ26 1411 aa16.96■□□□□ 0.31
AFF3-215ENST00000498090 ZBED9Q6R2W3 1325 aa16.96■□□□□ 0.31
AFF3-215ENST00000498090 PIK3C2GO75747 1445 aa16.95■□□□□ 0.3
AFF3-215ENST00000498090 NUTM2DQ5VT03 806 aaPredicted RBP16.95■□□□□ 0.3
AFF3-215ENST00000498090 MRS2Q9HD23 443 aa16.94■□□□□ 0.3
AFF3-215ENST00000498090 TMEM2Q9UHN6 1383 aa16.93■□□□□ 0.3
AFF3-215ENST00000498090 ARHGAP23Q9P227 1491 aa16.93■□□□□ 0.3
AFF3-215ENST00000498090 SLIT1O75093 1534 aa16.92■□□□□ 0.3
AFF3-215ENST00000498090 NBPF1Q3BBV0 1214 aa16.91■□□□□ 0.3
AFF3-215ENST00000498090 GPRASP1Q5JY77 1395 aa16.91■□□□□ 0.3
AFF3-215ENST00000498090 KTN1Q86UP2 1357 aaKnown RBP16.91■□□□□ 0.3
AFF3-215ENST00000498090 SETD1BQ9UPS6 1966 aaKnown RBP16.9■□□□□ 0.3
AFF3-215ENST00000498090 KIAA1210Q9ULL0 1709 aa16.9■□□□□ 0.3
AFF3-215ENST00000498090 VGFO15240 615 aaPredicted RBP16.9■□□□□ 0.3
AFF3-215ENST00000498090 ADRA2BP18089 450 aa16.89■□□□□ 0.29
AFF3-215ENST00000498090 CFAP70Q5T0N1 1121 aa16.89■□□□□ 0.29
AFF3-215ENST00000498090 LAMC1P11047 1609 aa16.88■□□□□ 0.29
AFF3-215ENST00000498090 NRXN3Q9Y4C0 1643 aa16.87■□□□□ 0.29
AFF3-215ENST00000498090 ASXL1Q8IXJ9 1541 aa16.87■□□□□ 0.29
AFF3-215ENST00000498090 LTKP29376 864 aa16.87■□□□□ 0.29
AFF3-215ENST00000498090 THEMISQ8N1K5 641 aaPredicted RBP16.86■□□□□ 0.29
AFF3-215ENST00000498090 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.86■□□□□ 0.29
AFF3-215ENST00000498090 ADGRB1O14514 1584 aa16.86■□□□□ 0.29
AFF3-215ENST00000498090 SETBP1Q9Y6X0 1596 aa16.85■□□□□ 0.29
AFF3-215ENST00000498090 CCDC184Q52MB2 194 aa16.85■□□□□ 0.29
AFF3-215ENST00000498090 FAM9BQ8IZU0 186 aa16.85■□□□□ 0.29
AFF3-215ENST00000498090 CARD11Q9BXL7 1154 aa16.85■□□□□ 0.29
AFF3-215ENST00000498090 C14orf93Q9H972 538 aaKnown RBP16.85■□□□□ 0.29
AFF3-215ENST00000498090 ALKQ9UM73 1620 aa16.84■□□□□ 0.29
AFF3-215ENST00000498090 SETD1AO15047 1707 aaKnown RBP16.84■□□□□ 0.29
AFF3-215ENST00000498090 IQGAP1P46940 1657 aa16.84■□□□□ 0.29
AFF3-215ENST00000498090 SCAF11Q99590 1463 aaKnown RBP16.84■□□□□ 0.29
AFF3-215ENST00000498090 PPP4R2Q9NY27 417 aa16.84■□□□□ 0.29
AFF3-215ENST00000498090 PLEKHG1Q9ULL1 1385 aa16.83■□□□□ 0.28
AFF3-215ENST00000498090 TXNDC2Q86VQ3 553 aa16.82■□□□□ 0.28
AFF3-215ENST00000498090 ADAMTS13Q76LX8 1427 aa16.81■□□□□ 0.28
AFF3-215ENST00000498090 SMG6Q86US8 1419 aaKnown RBP16.81■□□□□ 0.28
AFF3-215ENST00000498090 HDGFP51858 240 aaKnown RBP16.81■□□□□ 0.28
AFF3-215ENST00000498090 TMEM132EQ6IEE7 984 aa16.8■□□□□ 0.28
AFF3-215ENST00000498090 EID1Q9Y6B2 187 aa16.8■□□□□ 0.28
AFF3-215ENST00000498090 STRCQ7RTU9 1775 aa16.8■□□□□ 0.28
AFF3-215ENST00000498090 RALBP1Q15311 655 aa16.79■□□□□ 0.28
AFF3-215ENST00000498090 RBM19Q9Y4C8 960 aaKnown RBP16.79■□□□□ 0.28
AFF3-215ENST00000498090 MED14O60244 1454 aa16.78■□□□□ 0.28
AFF3-215ENST00000498090 BRD4O60885 1362 aaPredicted RBP16.76■□□□□ 0.27
AFF3-215ENST00000498090 ANP32EQ9BTT0 268 aa16.76■□□□□ 0.27
AFF3-215ENST00000498090 NCKAP5LQ9HCH0 1330 aa16.76■□□□□ 0.27
AFF3-215ENST00000498090 METP08581 1390 aa16.76■□□□□ 0.27
AFF3-215ENST00000498090 ST20-MTHFSA0A0A6YYL1 179 aa16.75■□□□□ 0.27
AFF3-215ENST00000498090 ANKLE2Q86XL3 938 aa16.75■□□□□ 0.27
AFF3-215ENST00000498090 YTHDC2Q9H6S0 1430 aaKnown RBP16.74■□□□□ 0.27
AFF3-215ENST00000498090 DIP2AQ14689 1571 aa16.73■□□□□ 0.27
AFF3-215ENST00000498090 MYBBP1AQ9BQG0 1328 aaKnown RBP16.73■□□□□ 0.27
AFF3-215ENST00000498090 TMC1Q8TDI8 760 aa16.72■□□□□ 0.27
AFF3-215ENST00000498090 PNISRQ8TF01 805 aaKnown RBP16.72■□□□□ 0.27
AFF3-215ENST00000498090 SLC26A8Q96RN1 970 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms