RNA–Protein interactions for RNA: ENST00000497404.1

CD53-205, Transcript of CD53 molecule, humanhuman

TSL 5

Gene CD53, Length 917 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-205ENST00000497404 UPF1Q92900 1129 aaKnown RBP eCLIP7.83□□□□□ -1.16
CD53-205ENST00000497404 TRAPPC8Q9Y2L5 1435 aa7.83□□□□□ -1.16
CD53-205ENST00000497404 PAXIP1Q6ZW49 1069 aaPredicted RBP7.82□□□□□ -1.16
CD53-205ENST00000497404 C9orf84Q5VXU9 1444 aa7.81□□□□□ -1.16
CD53-205ENST00000497404 C3P01024 1663 aa7.81□□□□□ -1.16
CD53-205ENST00000497404 ZMYM4Q5VZL5 1548 aa7.81□□□□□ -1.16
CD53-205ENST00000497404 MAGI2Q86UL8 1455 aa7.81□□□□□ -1.16
CD53-205ENST00000497404 CFAP44Q96MT7 982 aa7.8□□□□□ -1.16
CD53-205ENST00000497404 SUPT5HO00267 1087 aaKnown RBP7.79□□□□□ -1.16
CD53-205ENST00000497404 CDAN1Q8IWY9 1227 aa7.79□□□□□ -1.16
CD53-205ENST00000497404 GOLGA3Q08378 1498 aa7.79□□□□□ -1.16
CD53-205ENST00000497404 SCAPERQ9BY12 1400 aa7.78□□□□□ -1.16
CD53-205ENST00000497404 SLAIN1Q8ND83 568 aa7.78□□□□□ -1.16
CD53-205ENST00000497404 PTPRKQ15262 1439 aa7.78□□□□□ -1.16
CD53-205ENST00000497404 PLEKHD1A6NEE1 506 aa7.77□□□□□ -1.17
CD53-205ENST00000497404 PLCB2Q00722 1185 aa7.77□□□□□ -1.17
CD53-205ENST00000497404 TRIM52Q96A61 297 aa7.77□□□□□ -1.17
CD53-205ENST00000497404 RAPGEF2Q9Y4G8 1499 aa7.76□□□□□ -1.17
CD53-205ENST00000497404 CFAP74Q9C0B2 1584 aa7.76□□□□□ -1.17
CD53-205ENST00000497404 TMC2Q8TDI7 906 aa7.75□□□□□ -1.17
CD53-205ENST00000497404 SHANK2Q9UPX8 1470 aa7.75□□□□□ -1.17
CD53-205ENST00000497404 ALKQ9UM73 1620 aa7.74□□□□□ -1.17
CD53-205ENST00000497404 CPS1P31327 1500 aa7.74□□□□□ -1.17
CD53-205ENST00000497404 SUPT6HQ7KZ85 1726 aaKnown RBP7.74□□□□□ -1.17
CD53-205ENST00000497404 KIF3CO14782 793 aa7.73□□□□□ -1.17
CD53-205ENST00000497404 SNPHO15079 494 aa7.73□□□□□ -1.17
CD53-205ENST00000497404 AFAP1Q8N556 730 aa7.73□□□□□ -1.17
CD53-205ENST00000497404 PDE4AP27815 886 aa7.72□□□□□ -1.17
CD53-205ENST00000497404 TMEM92Q6UXU6 159 aa7.72□□□□□ -1.17
CD53-205ENST00000497404 GPHNQ9NQX3 736 aaPredicted RBP7.72□□□□□ -1.17
CD53-205ENST00000497404 PLA2R1Q13018 1463 aa7.72□□□□□ -1.17
CD53-205ENST00000497404 TCOF1Q13428 1488 aaKnown RBP7.72□□□□□ -1.17
CD53-205ENST00000497404 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.72□□□□□ -1.17
CD53-205ENST00000497404 CRISPLD2Q9H0B8 497 aa7.71□□□□□ -1.18
CD53-205ENST00000497404 ZMYM3Q14202 1370 aa7.71□□□□□ -1.18
CD53-205ENST00000497404 C2orf72A6NCS6 295 aa7.7□□□□□ -1.18
CD53-205ENST00000497404 CTTNBP2Q8WZ74 1663 aa7.7□□□□□ -1.18
CD53-205ENST00000497404 NPATQ14207 1427 aa7.69□□□□□ -1.18
CD53-205ENST00000497404 CNTLNQ9NXG0 1405 aa7.69□□□□□ -1.18
CD53-205ENST00000497404 RAPGEF6Q8TEU7 1601 aa7.68□□□□□ -1.18
CD53-205ENST00000497404 ST18O60284 1047 aa7.68□□□□□ -1.18
CD53-205ENST00000497404 RANGAP1P46060 587 aaPredicted RBP7.68□□□□□ -1.18
CD53-205ENST00000497404 FOXK1P85037 733 aa7.68□□□□□ -1.18
CD53-205ENST00000497404 EFCAB2Q5VUJ9 269 aa7.68□□□□□ -1.18
CD53-205ENST00000497404 CEP170BQ9Y4F5 1589 aaPredicted RBP7.67□□□□□ -1.18
CD53-205ENST00000497404 MFSD10Q14728 455 aa7.67□□□□□ -1.18
CD53-205ENST00000497404 DOK7Q18PE1 504 aa7.67□□□□□ -1.18
CD53-205ENST00000497404 RBM33Q96EV2 1170 aaKnown RBP7.67□□□□□ -1.18
CD53-205ENST00000497404 DIP2CQ9Y2E4 1556 aa7.67□□□□□ -1.18
CD53-205ENST00000497404 CADPS2Q86UW7 1296 aa7.66□□□□□ -1.18
CD53-205ENST00000497404 PLCH2O75038 1416 aa7.66□□□□□ -1.18
CD53-205ENST00000497404 MYO3AQ8NEV4 1616 aa7.66□□□□□ -1.18
CD53-205ENST00000497404 RIMBP2O15034 1052 aa7.65□□□□□ -1.18
CD53-205ENST00000497404 AGLP35573 1532 aa7.65□□□□□ -1.18
CD53-205ENST00000497404 NUP153P49790 1475 aaKnown RBP7.65□□□□□ -1.18
CD53-205ENST00000497404 ZNF142P52746 1687 aaPredicted RBP7.65□□□□□ -1.18
CD53-205ENST00000497404 MEX3CQ5U5Q3 659 aaKnown RBP7.65□□□□□ -1.18
CD53-205ENST00000497404 ZNF518AQ6AHZ1 1483 aa7.65□□□□□ -1.18
CD53-205ENST00000497404 ANKLE2Q86XL3 938 aa7.65□□□□□ -1.18
CD53-205ENST00000497404 VWDEQ8N2E2 1590 aa7.65□□□□□ -1.18
CD53-205ENST00000497404 DDX27Q96GQ7 796 aaKnown RBP7.65□□□□□ -1.18
CD53-205ENST00000497404 LRRC7Q96NW7 1537 aa7.64□□□□□ -1.19
CD53-205ENST00000497404 RXRBP28702 533 aa7.64□□□□□ -1.19
CD53-205ENST00000497404 DSG2Q14126 1118 aa7.64□□□□□ -1.19
CD53-205ENST00000497404 PPP1R15BQ5SWA1 713 aa7.64□□□□□ -1.19
CD53-205ENST00000497404 LARP6Q9BRS8 491 aaKnown RBP7.64□□□□□ -1.19
CD53-205ENST00000497404 ZSWIM6Q9HCJ5 1215 aa7.64□□□□□ -1.19
CD53-205ENST00000497404 TSHZ2Q9NRE2 1034 aa7.64□□□□□ -1.19
CD53-205ENST00000497404 ABCA6Q8N139 1617 aa7.63□□□□□ -1.19
CD53-205ENST00000497404 SLC34A2O95436 690 aa7.63□□□□□ -1.19
CD53-205ENST00000497404 IFFO2Q5TF58 517 aa7.63□□□□□ -1.19
CD53-205ENST00000497404 ZNF772Q68DY9 489 aaPredicted RBP7.63□□□□□ -1.19
CD53-205ENST00000497404 PLPP6Q8IY26 295 aa7.63□□□□□ -1.19
CD53-205ENST00000497404 NEURL4Q96JN8 1562 aa7.63□□□□□ -1.19
CD53-205ENST00000497404 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.62□□□□□ -1.19
CD53-205ENST00000497404 HOXB3P14651 431 aaPredicted RBP7.62□□□□□ -1.19
CD53-205ENST00000497404 HAP1P54257 671 aaPredicted RBP7.62□□□□□ -1.19
CD53-205ENST00000497404 GGT6Q6P531 493 aa7.62□□□□□ -1.19
CD53-205ENST00000497404 DNMT1P26358 1616 aaKnown RBP7.62□□□□□ -1.19
CD53-205ENST00000497404 RNF17Q9BXT8 1623 aaKnown RBP7.62□□□□□ -1.19
CD53-205ENST00000497404 SETBP1Q9Y6X0 1596 aa7.62□□□□□ -1.19
CD53-205ENST00000497404 A2ML1A8K2U0 1454 aa7.62□□□□□ -1.19
CD53-205ENST00000497404 POLR1AO95602 1720 aaPredicted RBP7.61□□□□□ -1.19
CD53-205ENST00000497404 MROH2AA6NES4 1674 aa7.61□□□□□ -1.19
CD53-205ENST00000497404 CLTCQ00610 1675 aaKnown RBP7.61□□□□□ -1.19
CD53-205ENST00000497404 NUTM2BA6NNL0 878 aaPredicted RBP7.61□□□□□ -1.19
CD53-205ENST00000497404 NUTM2EB1AL46 878 aaPredicted RBP7.61□□□□□ -1.19
CD53-205ENST00000497404 NUTM2DQ5VT03 806 aaPredicted RBP7.61□□□□□ -1.19
CD53-205ENST00000497404 NUTM2AQ8IVF1 878 aaPredicted RBP7.61□□□□□ -1.19
CD53-205ENST00000497404 ZNF710Q8N1W2 664 aa7.61□□□□□ -1.19
CD53-205ENST00000497404 WDR70Q9NW82 654 aa7.61□□□□□ -1.19
CD53-205ENST00000497404 REREQ9P2R6 1566 aa7.61□□□□□ -1.19
CD53-205ENST00000497404 STRCP1A6NGW2 1772 aa7.61□□□□□ -1.19
CD53-205ENST00000497404 NPHP4O75161 1426 aaPredicted RBP7.61□□□□□ -1.19
CD53-205ENST00000497404 KDM5CP41229 1560 aa7.6□□□□□ -1.19
CD53-205ENST00000497404 MMRN1Q13201 1228 aa7.6□□□□□ -1.19
CD53-205ENST00000497404 ATP1B4Q9UN42 357 aaPredicted RBP7.6□□□□□ -1.19
CD53-205ENST00000497404 FBXO31Q5XUX0 539 aaPredicted RBP7.59□□□□□ -1.19
CD53-205ENST00000497404 SPNS2Q8IVW8 549 aa7.59□□□□□ -1.19
CD53-205ENST00000497404 FAM135BQ49AJ0 1406 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms