RNA–Protein interactions for RNA: ENST00000497335.1

BRWD3-205, Transcript of bromodomain and WD repeat domain containing 3, humanhuman

TSL 3

Gene BRWD3, Length 959 nt, Biotype processed transcript, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD3-205ENST00000497335 SWT1Q5T5J6 900 aaKnown RBP13.57□□□□□ -0.24
BRWD3-205ENST00000497335 SAMD7Q7Z3H4 446 aa13.57□□□□□ -0.24
BRWD3-205ENST00000497335 WNT2BQ93097 391 aa13.57□□□□□ -0.24
BRWD3-205ENST00000497335 SPNS2Q8IVW8 549 aa13.56□□□□□ -0.24
BRWD3-205ENST00000497335 SLF2Q8IX21 1173 aa13.56□□□□□ -0.24
BRWD3-205ENST00000497335 NLRP7Q8WX94 980 aa13.56□□□□□ -0.24
BRWD3-205ENST00000497335 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.56□□□□□ -0.24
BRWD3-205ENST00000497335 SULF1Q8IWU6 871 aa13.55□□□□□ -0.24
BRWD3-205ENST00000497335 NECTIN2Q92692 538 aa13.55□□□□□ -0.24
BRWD3-205ENST00000497335 PARP9Q8IXQ6 854 aa13.54□□□□□ -0.24
BRWD3-205ENST00000497335 SOWAHBA6NEL2 793 aa13.53□□□□□ -0.24
BRWD3-205ENST00000497335 RSPH4AQ5TD94 716 aa13.53□□□□□ -0.24
BRWD3-205ENST00000497335 TMUB1Q9BVT8 246 aa13.53□□□□□ -0.24
BRWD3-205ENST00000497335 KCTD12Q96CX2 325 aaKnown RBP13.52□□□□□ -0.25
BRWD3-205ENST00000497335 GIGYF2Q6Y7W6 1299 aaKnown RBP13.51□□□□□ -0.25
BRWD3-205ENST00000497335 RNF40O75150 1001 aa13.5□□□□□ -0.25
BRWD3-205ENST00000497335 NEUROD2Q15784 382 aa13.5□□□□□ -0.25
BRWD3-205ENST00000497335 THSD4Q6ZMP0 1018 aa13.49□□□□□ -0.25
BRWD3-205ENST00000497335 FAM217BQ9NTX9 383 aaPredicted RBP13.49□□□□□ -0.25
BRWD3-205ENST00000497335 DDX11L8A8MPP1 907 aa13.48□□□□□ -0.25
BRWD3-205ENST00000497335 BCAMP50895 628 aa13.48□□□□□ -0.25
BRWD3-205ENST00000497335 REPIN1Q9BWE0 567 aaKnown RBP13.48□□□□□ -0.25
BRWD3-205ENST00000497335 BRPF1P55201 1214 aaPredicted RBP13.47□□□□□ -0.25
BRWD3-205ENST00000497335 RNF166Q96A37 237 aaPredicted RBP13.47□□□□□ -0.25
BRWD3-205ENST00000497335 TSR3Q9UJK0 312 aaKnown RBP13.47□□□□□ -0.25
BRWD3-205ENST00000497335 SSTR3P32745 418 aaPredicted RBP13.45□□□□□ -0.26
BRWD3-205ENST00000497335 PPP4CP60510 307 aa13.45□□□□□ -0.26
BRWD3-205ENST00000497335 RDH13Q8NBN7 331 aa13.45□□□□□ -0.26
BRWD3-205ENST00000497335 KDM4CQ9H3R0 1056 aa13.45□□□□□ -0.26
BRWD3-205ENST00000497335 GPBP1L1Q9HC44 474 aaPredicted RBP13.45□□□□□ -0.26
BRWD3-205ENST00000497335 HPS5Q9UPZ3 1129 aa13.45□□□□□ -0.26
BRWD3-205ENST00000497335 CD46P15529 392 aa13.42□□□□□ -0.26
BRWD3-205ENST00000497335 NYAP1Q6ZVC0 841 aa13.41□□□□□ -0.26
BRWD3-205ENST00000497335 PRR14Q9BWN1 585 aa13.41□□□□□ -0.26
BRWD3-205ENST00000497335 SLC10A3P09131 477 aa13.4□□□□□ -0.26
BRWD3-205ENST00000497335 MS4A1P11836 297 aa13.4□□□□□ -0.26
BRWD3-205ENST00000497335 MMRN1Q13201 1228 aa13.4□□□□□ -0.26
BRWD3-205ENST00000497335 KMT5BQ4FZB7 885 aa13.39□□□□□ -0.27
BRWD3-205ENST00000497335 CFHP08603 1231 aa13.38□□□□□ -0.27
BRWD3-205ENST00000497335 PTPN5P54829 565 aa13.38□□□□□ -0.27
BRWD3-205ENST00000497335 DDRGK1Q96HY6 314 aa13.38□□□□□ -0.27
BRWD3-205ENST00000497335 WBP1LQ9NX94 342 aa13.37□□□□□ -0.27
BRWD3-205ENST00000497335 HCSTQ9UBK5 93 aa13.37□□□□□ -0.27
BRWD3-205ENST00000497335 GCGRP47871 477 aa13.36□□□□□ -0.27
BRWD3-205ENST00000497335 BEGAINQ9BUH8 593 aa13.36□□□□□ -0.27
BRWD3-205ENST00000497335 DIXDC1Q155Q3 683 aa13.33□□□□□ -0.28
BRWD3-205ENST00000497335 NUTM1Q86Y26 1132 aa13.32□□□□□ -0.28
BRWD3-205ENST00000497335 ACTN4O43707 911 aaKnown RBP13.31□□□□□ -0.28
BRWD3-205ENST00000497335 KDM4AO75164 1064 aa13.31□□□□□ -0.28
BRWD3-205ENST00000497335 USP46P62068 366 aa13.31□□□□□ -0.28
BRWD3-205ENST00000497335 FAM117AQ9C073 453 aa13.31□□□□□ -0.28
BRWD3-205ENST00000497335 APLP1P51693 650 aa13.3□□□□□ -0.28
BRWD3-205ENST00000497335 GRIPAP1Q4V328 841 aa13.29□□□□□ -0.28
BRWD3-205ENST00000497335 RSPH6AQ9H0K4 717 aa13.27□□□□□ -0.29
BRWD3-205ENST00000497335 FUT2Q10981 343 aa13.26□□□□□ -0.29
BRWD3-205ENST00000497335 ATP6V1AP38606 617 aa13.25□□□□□ -0.29
BRWD3-205ENST00000497335 SPIRE2Q8WWL2 714 aa13.25□□□□□ -0.29
BRWD3-205ENST00000497335 TBC1D2Q9BYX2 928 aa13.25□□□□□ -0.29
BRWD3-205ENST00000497335 PCDHB3Q9Y5E6 796 aa13.25□□□□□ -0.29
BRWD3-205ENST00000497335 IL27Q8NEV9 243 aa13.24□□□□□ -0.29
BRWD3-205ENST00000497335 PLEKHG3A1L390 1219 aa13.23□□□□□ -0.29
BRWD3-205ENST00000497335 HOXA2O43364 376 aa13.22□□□□□ -0.29
BRWD3-205ENST00000497335 GJA5P36382 358 aa13.19□□□□□ -0.3
BRWD3-205ENST00000497335 SH3D19Q5HYK7 790 aa13.19□□□□□ -0.3
BRWD3-205ENST00000497335 MYSM1Q5VVJ2 828 aa13.19□□□□□ -0.3
BRWD3-205ENST00000497335 NR1I2O75469 434 aa13.18□□□□□ -0.3
BRWD3-205ENST00000497335 MORN1Q5T089 497 aa13.18□□□□□ -0.3
BRWD3-205ENST00000497335 GOPCQ9HD26 462 aa13.18□□□□□ -0.3
BRWD3-205ENST00000497335 PUS10Q3MIT2 529 aaKnown RBP13.17□□□□□ -0.3
BRWD3-205ENST00000497335 MOXD2PA6NHM9 499 aa13.16□□□□□ -0.3
BRWD3-205ENST00000497335 BLOC1S3Q6QNY0 202 aa13.16□□□□□ -0.3
BRWD3-205ENST00000497335 MTRQ99707 1265 aa13.16□□□□□ -0.3
BRWD3-205ENST00000497335 IL21Q9HBE4 155 aa13.16□□□□□ -0.3
BRWD3-205ENST00000497335 FDX1P10109 184 aa13.15□□□□□ -0.3
BRWD3-205ENST00000497335 COPS2P61201 443 aa13.15□□□□□ -0.3
BRWD3-205ENST00000497335 SKIV2LQ15477 1246 aaKnown RBP13.15□□□□□ -0.3
BRWD3-205ENST00000497335 SPTLC1O15269 473 aa13.14□□□□□ -0.31
BRWD3-205ENST00000497335 Q3C1V9 767 aa13.14□□□□□ -0.31
BRWD3-205ENST00000497335 RSBN1LQ6PCB5 846 aaPredicted RBP13.14□□□□□ -0.31
BRWD3-205ENST00000497335 RIC3Q7Z5B4 369 aa13.14□□□□□ -0.31
BRWD3-205ENST00000497335 PLSCR2Q9NRY7 297 aa13.14□□□□□ -0.31
BRWD3-205ENST00000497335 CLK2P49760 499 aaKnown RBP13.13□□□□□ -0.31
BRWD3-205ENST00000497335 TMEM132AQ24JP5 1023 aa13.13□□□□□ -0.31
BRWD3-205ENST00000497335 SLC27A5Q9Y2P5 690 aa13.13□□□□□ -0.31
BRWD3-205ENST00000497335 NDUFV2P19404 249 aa13.12□□□□□ -0.31
BRWD3-205ENST00000497335 TJAP1Q5JTD0 557 aa13.12□□□□□ -0.31
BRWD3-205ENST00000497335 ITGBL1O95965 494 aaPredicted RBP13.11□□□□□ -0.31
BRWD3-205ENST00000497335 TUSC1Q2TAM9 212 aa13.11□□□□□ -0.31
BRWD3-205ENST00000497335 SCUBE3Q8IX30 993 aa13.11□□□□□ -0.31
BRWD3-205ENST00000497335 PCMTD1Q96MG8 357 aaPredicted RBP13.11□□□□□ -0.31
BRWD3-205ENST00000497335 SALL2Q9Y467 1007 aaPredicted RBP13.11□□□□□ -0.31
BRWD3-205ENST00000497335 HLA-CQ95604 372 aa13.1□□□□□ -0.31
BRWD3-205ENST00000497335 POLR3EQ9NVU0 708 aa13.1□□□□□ -0.31
BRWD3-205ENST00000497335 ZPR1O75312 459 aa13.09□□□□□ -0.31
BRWD3-205ENST00000497335 GUCA2AQ02747 115 aa13.09□□□□□ -0.31
BRWD3-205ENST00000497335 KCNC4Q03721 635 aa13.09□□□□□ -0.31
BRWD3-205ENST00000497335 FMNL1O95466 1100 aaPredicted RBP13.08□□□□□ -0.32
BRWD3-205ENST00000497335 ATP1B4Q9UN42 357 aaPredicted RBP13.08□□□□□ -0.32
BRWD3-205ENST00000497335 PRPF38BQ5VTL8 546 aaKnown RBP13.07□□□□□ -0.32
BRWD3-205ENST00000497335 LIMD1Q9UGP4 676 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms