RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 FECHP22830 423 aa11.18□□□□□ -0.62
GGPS1-208ENST00000497327 SMYD5Q6GMV2 418 aa11.18□□□□□ -0.62
GGPS1-208ENST00000497327 NKX2-3Q8TAU0 364 aa11.18□□□□□ -0.62
GGPS1-208ENST00000497327 SLC4A3P48751 1232 aa11.17□□□□□ -0.62
GGPS1-208ENST00000497327 COPS2P61201 443 aa11.17□□□□□ -0.62
GGPS1-208ENST00000497327 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.16□□□□□ -0.62
GGPS1-208ENST00000497327 PPP1R18Q6NYC8 613 aa11.16□□□□□ -0.62
GGPS1-208ENST00000497327 SLC10A3P09131 477 aa11.15□□□□□ -0.62
GGPS1-208ENST00000497327 GNPATO15228 680 aa11.14□□□□□ -0.63
GGPS1-208ENST00000497327 METTL3Q86U44 580 aaKnown RBP11.14□□□□□ -0.63
GGPS1-208ENST00000497327 PRR14Q9BWN1 585 aa11.14□□□□□ -0.63
GGPS1-208ENST00000497327 ZPR1O75312 459 aa11.13□□□□□ -0.63
GGPS1-208ENST00000497327 OATP04181 439 aa11.13□□□□□ -0.63
GGPS1-208ENST00000497327 PCDHB3Q9Y5E6 796 aa11.13□□□□□ -0.63
GGPS1-208ENST00000497327 BLOC1S3Q6QNY0 202 aa11.12□□□□□ -0.63
GGPS1-208ENST00000497327 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.12□□□□□ -0.63
GGPS1-208ENST00000497327 ACTN4O43707 911 aaKnown RBP11.11□□□□□ -0.63
GGPS1-208ENST00000497327 CFHP08603 1231 aa11.11□□□□□ -0.63
GGPS1-208ENST00000497327 VSIG10Q8N0Z9 540 aa11.1□□□□□ -0.63
GGPS1-208ENST00000497327 KMT5BQ4FZB7 885 aa11.08□□□□□ -0.64
GGPS1-208ENST00000497327 PRKD2Q9BZL6 878 aa11.08□□□□□ -0.64
GGPS1-208ENST00000497327 TLL1O43897 1013 aa11.06□□□□□ -0.64
GGPS1-208ENST00000497327 GPIHBP1Q8IV16 184 aa11.06□□□□□ -0.64
GGPS1-208ENST00000497327 PHOX2BQ99453 314 aa11.06□□□□□ -0.64
GGPS1-208ENST00000497327 NLRP7Q8WX94 980 aa11.05□□□□□ -0.64
GGPS1-208ENST00000497327 V9GY48 417 aaPredicted RBP11.04□□□□□ -0.64
GGPS1-208ENST00000497327 TMUB1Q9BVT8 246 aa11.03□□□□□ -0.64
GGPS1-208ENST00000497327 DAXXQ9UER7 740 aaPredicted RBP11.03□□□□□ -0.64
GGPS1-208ENST00000497327 GGCXP38435 758 aa11.01□□□□□ -0.65
GGPS1-208ENST00000497327 RNF223E7ERA6 249 aa11□□□□□ -0.65
GGPS1-208ENST00000497327 EMID1Q96A84 441 aaPredicted RBP11□□□□□ -0.65
GGPS1-208ENST00000497327 LCE2BO14633 110 aa10.97□□□□□ -0.65
GGPS1-208ENST00000497327 NR1I2O75469 434 aa10.97□□□□□ -0.65
GGPS1-208ENST00000497327 S1PR4O95977 384 aa10.97□□□□□ -0.65
GGPS1-208ENST00000497327 ADH1BP00325 375 aa10.97□□□□□ -0.65
GGPS1-208ENST00000497327 PUS10Q3MIT2 529 aaKnown RBP10.97□□□□□ -0.65
GGPS1-208ENST00000497327 Q6ZNB5 142 aa10.97□□□□□ -0.65
GGPS1-208ENST00000497327 GFRA3O60609 400 aa10.96□□□□□ -0.65
GGPS1-208ENST00000497327 LAPTM4AQ15012 233 aa10.96□□□□□ -0.65
GGPS1-208ENST00000497327 RSPH4AQ5TD94 716 aa10.96□□□□□ -0.65
GGPS1-208ENST00000497327 DDX11L8A8MPP1 907 aa10.95□□□□□ -0.66
GGPS1-208ENST00000497327 SCUBE3Q8IX30 993 aa10.95□□□□□ -0.66
GGPS1-208ENST00000497327 RDH13Q8NBN7 331 aa10.95□□□□□ -0.66
GGPS1-208ENST00000497327 MAP2K5Q13163 448 aa10.94□□□□□ -0.66
GGPS1-208ENST00000497327 PPEF1O14829 653 aaPredicted RBP10.93□□□□□ -0.66
GGPS1-208ENST00000497327 MORN1Q5T089 497 aa10.93□□□□□ -0.66
GGPS1-208ENST00000497327 ANKLE1Q8NAG6 615 aa10.93□□□□□ -0.66
GGPS1-208ENST00000497327 NRG2O14511 850 aaPredicted RBP10.92□□□□□ -0.66
GGPS1-208ENST00000497327 GCGRP47871 477 aa10.92□□□□□ -0.66
GGPS1-208ENST00000497327 FUT2Q10981 343 aa10.92□□□□□ -0.66
GGPS1-208ENST00000497327 IRF6O14896 467 aa10.9□□□□□ -0.66
GGPS1-208ENST00000497327 SLC19A1P41440 591 aa10.9□□□□□ -0.66
GGPS1-208ENST00000497327 SULF1Q8IWU6 871 aa10.9□□□□□ -0.66
GGPS1-208ENST00000497327 THAP11Q96EK4 314 aa10.9□□□□□ -0.66
GGPS1-208ENST00000497327 SLC6A16Q9GZN6 736 aa10.9□□□□□ -0.66
GGPS1-208ENST00000497327 LIAT1Q6ZQX7 453 aa10.89□□□□□ -0.67
GGPS1-208ENST00000497327 TRIM67Q6ZTA4 783 aa10.89□□□□□ -0.67
GGPS1-208ENST00000497327 TULP1O00294 542 aaPredicted RBP10.88□□□□□ -0.67
GGPS1-208ENST00000497327 ATP6V1AP38606 617 aa10.88□□□□□ -0.67
GGPS1-208ENST00000497327 PLA2G2CQ5R387 149 aa10.88□□□□□ -0.67
GGPS1-208ENST00000497327 SPSB2Q99619 263 aa10.88□□□□□ -0.67
GGPS1-208ENST00000497327 SPRYD7Q5W111 196 aa10.87□□□□□ -0.67
GGPS1-208ENST00000497327 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.87□□□□□ -0.67
GGPS1-208ENST00000497327 PDZRN3Q9UPQ7 1066 aa10.87□□□□□ -0.67
GGPS1-208ENST00000497327 MINK1Q8N4C8 1332 aaPredicted RBP10.86□□□□□ -0.67
GGPS1-208ENST00000497327 CD46P15529 392 aa10.86□□□□□ -0.67
GGPS1-208ENST00000497327 SLC27A5Q9Y2P5 690 aa10.86□□□□□ -0.67
GGPS1-208ENST00000497327 CCDC102AQ96A19 550 aa10.85□□□□□ -0.67
GGPS1-208ENST00000497327 TRAF7Q6Q0C0 670 aa10.84□□□□□ -0.67
GGPS1-208ENST00000497327 FAM160A2Q8N612 972 aaPredicted RBP10.84□□□□□ -0.67
GGPS1-208ENST00000497327 ZNF598Q86UK7 904 aaKnown RBP10.83□□□□□ -0.68
GGPS1-208ENST00000497327 MDM2Q00987 491 aaPredicted RBP10.82□□□□□ -0.68
GGPS1-208ENST00000497327 BRICD5Q6PL45 260 aa10.82□□□□□ -0.68
GGPS1-208ENST00000497327 SALL2Q9Y467 1007 aaPredicted RBP10.82□□□□□ -0.68
GGPS1-208ENST00000497327 FMNL1O95466 1100 aaPredicted RBP10.81□□□□□ -0.68
GGPS1-208ENST00000497327 ZNF697Q5TEC3 545 aa10.8□□□□□ -0.68
GGPS1-208ENST00000497327 RNF19BQ6ZMZ0 732 aa10.8□□□□□ -0.68
GGPS1-208ENST00000497327 PRDM9Q9NQV7 894 aa10.8□□□□□ -0.68
GGPS1-208ENST00000497327 PRR20EP86478 221 aa10.79□□□□□ -0.68
GGPS1-208ENST00000497327 PRR20CP86479 221 aa10.79□□□□□ -0.68
GGPS1-208ENST00000497327 PRR20DP86480 221 aa10.79□□□□□ -0.68
GGPS1-208ENST00000497327 PRR20BP86481 221 aa10.79□□□□□ -0.68
GGPS1-208ENST00000497327 PRR20AP86496 221 aa10.79□□□□□ -0.68
GGPS1-208ENST00000497327 LMOD2Q6P5Q4 547 aa10.79□□□□□ -0.68
GGPS1-208ENST00000497327 GDF9O60383 454 aa10.78□□□□□ -0.68
GGPS1-208ENST00000497327 MSS51Q4VC12 460 aa10.77□□□□□ -0.69
GGPS1-208ENST00000497327 KDM4AO75164 1064 aa10.76□□□□□ -0.69
GGPS1-208ENST00000497327 FCF1Q9Y324 198 aaKnown RBP10.76□□□□□ -0.69
GGPS1-208ENST00000497327 GRIPAP1Q4V328 841 aa10.75□□□□□ -0.69
GGPS1-208ENST00000497327 HLA-CQ95604 372 aa10.75□□□□□ -0.69
GGPS1-208ENST00000497327 GPCPD1Q9NPB8 672 aa10.75□□□□□ -0.69
GGPS1-208ENST00000497327 FAM217BQ9NTX9 383 aaPredicted RBP10.75□□□□□ -0.69
GGPS1-208ENST00000497327 REPIN1Q9BWE0 567 aaKnown RBP10.74□□□□□ -0.69
GGPS1-208ENST00000497327 CLCN1P35523 988 aa10.73□□□□□ -0.69
GGPS1-208ENST00000497327 PKD2L1Q9P0L9 805 aa10.73□□□□□ -0.69
GGPS1-208ENST00000497327 TNFRSF10AO00220 468 aa10.72□□□□□ -0.69
GGPS1-208ENST00000497327 HOXA2O43364 376 aa10.72□□□□□ -0.69
GGPS1-208ENST00000497327 ZMYND10O75800 440 aa10.72□□□□□ -0.69
GGPS1-208ENST00000497327 RPIAP49247 311 aa10.72□□□□□ -0.69
GGPS1-208ENST00000497327 USP46P62068 366 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms